Protein–RNA interactions for Protein: O95407

TNFRSF6B, Tumor necrosis factor receptor superfamily member 6B, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF6BO95407 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TNFRSF6BO95407 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TNFRSF6BO95407 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TNFRSF6BO95407 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TNFRSF6BO95407 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TNFRSF6BO95407 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
TNFRSF6BO95407 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC14.31□□□□□ -0.12
TNFRSF6BO95407 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TNFRSF6BO95407 CROCCP3-202ENST00000420820 1947 ntBASIC14.31□□□□□ -0.12
TNFRSF6BO95407 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
TNFRSF6BO95407 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC14.31□□□□□ -0.12
TNFRSF6BO95407 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TNFRSF6BO95407 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
TNFRSF6BO95407 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TNFRSF6BO95407 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC14.3□□□□□ -0.12
TNFRSF6BO95407 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TNFRSF6BO95407 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
TNFRSF6BO95407 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC14.3□□□□□ -0.12
TNFRSF6BO95407 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TNFRSF6BO95407 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC14.3□□□□□ -0.12
TNFRSF6BO95407 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
TNFRSF6BO95407 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TNFRSF6BO95407 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TNFRSF6BO95407 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
TNFRSF6BO95407 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
TNFRSF6BO95407 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TNFRSF6BO95407 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
TNFRSF6BO95407 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC14.3□□□□□ -0.12
TNFRSF6BO95407 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC14.3□□□□□ -0.12
TNFRSF6BO95407 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TNFRSF6BO95407 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC14.3□□□□□ -0.12
TNFRSF6BO95407 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
TNFRSF6BO95407 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TNFRSF6BO95407 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC14.3□□□□□ -0.12
TNFRSF6BO95407 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TNFRSF6BO95407 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC14.3□□□□□ -0.12
TNFRSF6BO95407 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC14.3□□□□□ -0.12
TNFRSF6BO95407 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
TNFRSF6BO95407 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TNFRSF6BO95407 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
TNFRSF6BO95407 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TNFRSF6BO95407 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TNFRSF6BO95407 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TNFRSF6BO95407 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TNFRSF6BO95407 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TNFRSF6BO95407 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC14.29□□□□□ -0.12
TNFRSF6BO95407 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TNFRSF6BO95407 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC14.29□□□□□ -0.12
TNFRSF6BO95407 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TNFRSF6BO95407 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TNFRSF6BO95407 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
TNFRSF6BO95407 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TNFRSF6BO95407 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TNFRSF6BO95407 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TNFRSF6BO95407 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TNFRSF6BO95407 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
TNFRSF6BO95407 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC14.29□□□□□ -0.12
TNFRSF6BO95407 MIR4767-201ENST00000582827 78 ntBASIC14.29□□□□□ -0.12
TNFRSF6BO95407 MIR4466-201ENST00000606121 54 ntBASIC14.29□□□□□ -0.12
TNFRSF6BO95407 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
TNFRSF6BO95407 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TNFRSF6BO95407 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC14.29□□□□□ -0.12
TNFRSF6BO95407 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TNFRSF6BO95407 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TNFRSF6BO95407 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC14.29□□□□□ -0.12
TNFRSF6BO95407 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TNFRSF6BO95407 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
TNFRSF6BO95407 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TNFRSF6BO95407 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TNFRSF6BO95407 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
TNFRSF6BO95407 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TNFRSF6BO95407 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC14.29□□□□□ -0.12
TNFRSF6BO95407 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TNFRSF6BO95407 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
TNFRSF6BO95407 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
TNFRSF6BO95407 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
TNFRSF6BO95407 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TNFRSF6BO95407 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TNFRSF6BO95407 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TNFRSF6BO95407 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
TNFRSF6BO95407 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC14.28□□□□□ -0.12
TNFRSF6BO95407 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TNFRSF6BO95407 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TNFRSF6BO95407 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TNFRSF6BO95407 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
TNFRSF6BO95407 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TNFRSF6BO95407 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TNFRSF6BO95407 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
TNFRSF6BO95407 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TNFRSF6BO95407 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC14.28□□□□□ -0.12
TNFRSF6BO95407 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC14.28□□□□□ -0.12
TNFRSF6BO95407 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC14.28□□□□□ -0.12
TNFRSF6BO95407 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC14.28□□□□□ -0.12
TNFRSF6BO95407 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
TNFRSF6BO95407 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC14.28□□□□□ -0.12
TNFRSF6BO95407 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
TNFRSF6BO95407 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
TNFRSF6BO95407 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
TNFRSF6BO95407 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
TNFRSF6BO95407 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms