Protein–RNA interactions for Protein: O75508

CLDN11, Claudin-11, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11O75508 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLDN11O75508 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
CLDN11O75508 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLDN11O75508 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CLDN11O75508 MIR718-201ENST00000390190 70 ntBASIC20.19■□□□□ 0.82
CLDN11O75508 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
CLDN11O75508 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CLDN11O75508 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLDN11O75508 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CLDN11O75508 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC20.19■□□□□ 0.82
CLDN11O75508 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC20.19■□□□□ 0.82
CLDN11O75508 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC20.19■□□□□ 0.82
CLDN11O75508 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
CLDN11O75508 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.19■□□□□ 0.82
CLDN11O75508 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CLDN11O75508 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC20.19■□□□□ 0.82
CLDN11O75508 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.18■□□□□ 0.82
CLDN11O75508 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC20.18■□□□□ 0.82
CLDN11O75508 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.18■□□□□ 0.82
CLDN11O75508 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
CLDN11O75508 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC20.18■□□□□ 0.82
CLDN11O75508 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLDN11O75508 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CLDN11O75508 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC20.18■□□□□ 0.82
CLDN11O75508 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC20.18■□□□□ 0.82
CLDN11O75508 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CLDN11O75508 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CLDN11O75508 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC20.18■□□□□ 0.82
CLDN11O75508 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
CLDN11O75508 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC20.18■□□□□ 0.82
CLDN11O75508 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CLDN11O75508 KRT18P16-201ENST00000510337 1294 ntBASIC20.18■□□□□ 0.82
CLDN11O75508 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC20.18■□□□□ 0.82
CLDN11O75508 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC20.18■□□□□ 0.82
CLDN11O75508 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLDN11O75508 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CLDN11O75508 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CLDN11O75508 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.18■□□□□ 0.82
CLDN11O75508 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC20.18■□□□□ 0.82
CLDN11O75508 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLDN11O75508 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CLDN11O75508 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC20.17■□□□□ 0.82
CLDN11O75508 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLDN11O75508 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CLDN11O75508 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLDN11O75508 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
CLDN11O75508 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.17■□□□□ 0.82
CLDN11O75508 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLDN11O75508 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLDN11O75508 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CLDN11O75508 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CLDN11O75508 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLDN11O75508 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLDN11O75508 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CLDN11O75508 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLDN11O75508 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
CLDN11O75508 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
CLDN11O75508 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CLDN11O75508 AC012618.2-201ENST00000428058 849 ntBASIC20.17■□□□□ 0.82
CLDN11O75508 RPS2P4-201ENST00000476944 856 ntBASIC20.17■□□□□ 0.82
CLDN11O75508 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLDN11O75508 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC20.17■□□□□ 0.82
CLDN11O75508 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.17■□□□□ 0.82
CLDN11O75508 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLDN11O75508 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
CLDN11O75508 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLDN11O75508 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLDN11O75508 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
CLDN11O75508 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLDN11O75508 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLDN11O75508 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CLDN11O75508 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLDN11O75508 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC20.16■□□□□ 0.82
CLDN11O75508 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLDN11O75508 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLDN11O75508 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLDN11O75508 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLDN11O75508 AL353807.1-201ENST00000427475 662 ntBASIC20.16■□□□□ 0.82
CLDN11O75508 TUBB8P6-201ENST00000436895 1288 ntBASIC20.16■□□□□ 0.82
CLDN11O75508 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC20.16■□□□□ 0.82
CLDN11O75508 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC20.16■□□□□ 0.82
CLDN11O75508 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC20.16■□□□□ 0.82
CLDN11O75508 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
CLDN11O75508 HTR7P1-201ENST00000538670 1336 ntBASIC20.16■□□□□ 0.82
CLDN11O75508 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC20.16■□□□□ 0.82
CLDN11O75508 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CLDN11O75508 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLDN11O75508 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLDN11O75508 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLDN11O75508 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CLDN11O75508 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
CLDN11O75508 TMEM179-206ENST00000616017 1645 ntBASIC20.16■□□□□ 0.82
CLDN11O75508 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
CLDN11O75508 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CLDN11O75508 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLDN11O75508 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC20.15■□□□□ 0.82
CLDN11O75508 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
CLDN11O75508 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
CLDN11O75508 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CLDN11O75508 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms