Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LCMT2O60294 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LCMT2O60294 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LCMT2O60294 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
LCMT2O60294 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LCMT2O60294 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.88■□□□□ 0.61
LCMT2O60294 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LCMT2O60294 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.87■□□□□ 0.61
LCMT2O60294 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LCMT2O60294 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LCMT2O60294 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LCMT2O60294 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LCMT2O60294 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LCMT2O60294 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LCMT2O60294 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LCMT2O60294 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LCMT2O60294 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.87■□□□□ 0.61
LCMT2O60294 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
LCMT2O60294 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC18.87■□□□□ 0.61
LCMT2O60294 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
LCMT2O60294 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.87■□□□□ 0.61
LCMT2O60294 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
LCMT2O60294 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LCMT2O60294 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
LCMT2O60294 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
LCMT2O60294 ITM2C-210ENST00000620962 501 ntBASIC18.87■□□□□ 0.61
LCMT2O60294 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18.87■□□□□ 0.61
LCMT2O60294 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC18.87■□□□□ 0.61
LCMT2O60294 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.87■□□□□ 0.61
LCMT2O60294 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
LCMT2O60294 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
LCMT2O60294 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
LCMT2O60294 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
LCMT2O60294 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
LCMT2O60294 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
LCMT2O60294 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
LCMT2O60294 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LCMT2O60294 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
LCMT2O60294 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC18.86■□□□□ 0.61
LCMT2O60294 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC18.86■□□□□ 0.61
LCMT2O60294 RN7SL471P-201ENST00000580476 299 ntBASIC18.86■□□□□ 0.61
LCMT2O60294 Six3os1_6.1-201ENST00000620790 196 ntBASIC18.86■□□□□ 0.61
LCMT2O60294 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.86■□□□□ 0.61
LCMT2O60294 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LCMT2O60294 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
LCMT2O60294 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
LCMT2O60294 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
LCMT2O60294 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
LCMT2O60294 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
LCMT2O60294 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.86■□□□□ 0.61
LCMT2O60294 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
LCMT2O60294 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.86■□□□□ 0.61
LCMT2O60294 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LCMT2O60294 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.85■□□□□ 0.61
LCMT2O60294 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.85■□□□□ 0.61
LCMT2O60294 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.85■□□□□ 0.61
LCMT2O60294 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
LCMT2O60294 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LCMT2O60294 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LCMT2O60294 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
LCMT2O60294 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LCMT2O60294 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LCMT2O60294 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC18.85■□□□□ 0.61
LCMT2O60294 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
LCMT2O60294 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
LCMT2O60294 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LCMT2O60294 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LCMT2O60294 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC18.85■□□□□ 0.61
LCMT2O60294 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LCMT2O60294 AL023875.1-201ENST00000640777 796 ntBASIC18.85■□□□□ 0.61
LCMT2O60294 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LCMT2O60294 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.85■□□□□ 0.61
LCMT2O60294 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
LCMT2O60294 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LCMT2O60294 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LCMT2O60294 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LCMT2O60294 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LCMT2O60294 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LCMT2O60294 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LCMT2O60294 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.84■□□□□ 0.61
LCMT2O60294 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
LCMT2O60294 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LCMT2O60294 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
LCMT2O60294 KRT18P29-201ENST00000397031 1267 ntBASIC18.84■□□□□ 0.61
LCMT2O60294 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LCMT2O60294 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC18.84■□□□□ 0.61
LCMT2O60294 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC18.84■□□□□ 0.61
LCMT2O60294 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC18.84■□□□□ 0.61
LCMT2O60294 MMD2-204ENST00000612910 778 ntTSL 5 BASIC18.84■□□□□ 0.61
LCMT2O60294 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LCMT2O60294 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC18.84■□□□□ 0.61
LCMT2O60294 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.84■□□□□ 0.61
LCMT2O60294 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
LCMT2O60294 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LCMT2O60294 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
LCMT2O60294 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC18.83■□□□□ 0.61
LCMT2O60294 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.83■□□□□ 0.61
LCMT2O60294 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
LCMT2O60294 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
LCMT2O60294 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms