Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 APTR-203ENST00000430801 583 ntTSL 5 BASIC19.85■□□□□ 0.77
TCRBV9S1A1TA0A576 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC19.85■□□□□ 0.77
TCRBV9S1A1TA0A576 C2orf69P4-201ENST00000565394 541 ntBASIC19.85■□□□□ 0.77
TCRBV9S1A1TA0A576 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC19.85■□□□□ 0.77
TCRBV9S1A1TA0A576 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TCRBV9S1A1TA0A576 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TCRBV9S1A1TA0A576 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.85■□□□□ 0.77
TCRBV9S1A1TA0A576 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
TCRBV9S1A1TA0A576 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TCRBV9S1A1TA0A576 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC19.85■□□□□ 0.77
TCRBV9S1A1TA0A576 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.84■□□□□ 0.77
TCRBV9S1A1TA0A576 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TCRBV9S1A1TA0A576 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19.84■□□□□ 0.77
TCRBV9S1A1TA0A576 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TCRBV9S1A1TA0A576 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
TCRBV9S1A1TA0A576 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TCRBV9S1A1TA0A576 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC19.84■□□□□ 0.77
TCRBV9S1A1TA0A576 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TCRBV9S1A1TA0A576 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
TCRBV9S1A1TA0A576 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
TCRBV9S1A1TA0A576 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC19.84■□□□□ 0.77
TCRBV9S1A1TA0A576 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC19.84■□□□□ 0.77
TCRBV9S1A1TA0A576 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TCRBV9S1A1TA0A576 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC19.84■□□□□ 0.77
TCRBV9S1A1TA0A576 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC19.84■□□□□ 0.77
TCRBV9S1A1TA0A576 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC19.84■□□□□ 0.77
TCRBV9S1A1TA0A576 AL589743.5-201ENST00000616611 1050 ntBASIC19.84■□□□□ 0.77
TCRBV9S1A1TA0A576 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC19.84■□□□□ 0.77
TCRBV9S1A1TA0A576 AC008694.1-202ENST00000636953 945 ntBASIC19.84■□□□□ 0.77
TCRBV9S1A1TA0A576 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
TCRBV9S1A1TA0A576 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
TCRBV9S1A1TA0A576 AC010980.2-201ENST00000587099 1412 ntBASIC19.84■□□□□ 0.77
TCRBV9S1A1TA0A576 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
TCRBV9S1A1TA0A576 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TCRBV9S1A1TA0A576 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
TCRBV9S1A1TA0A576 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
TCRBV9S1A1TA0A576 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
TCRBV9S1A1TA0A576 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TCRBV9S1A1TA0A576 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
TCRBV9S1A1TA0A576 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
TCRBV9S1A1TA0A576 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TCRBV9S1A1TA0A576 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TCRBV9S1A1TA0A576 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TCRBV9S1A1TA0A576 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.83■□□□□ 0.77
TCRBV9S1A1TA0A576 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TCRBV9S1A1TA0A576 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
TCRBV9S1A1TA0A576 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TCRBV9S1A1TA0A576 LINC01465-201ENST00000408887 1940 ntBASIC19.83■□□□□ 0.77
TCRBV9S1A1TA0A576 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TCRBV9S1A1TA0A576 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TCRBV9S1A1TA0A576 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TCRBV9S1A1TA0A576 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TCRBV9S1A1TA0A576 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC19.83■□□□□ 0.77
TCRBV9S1A1TA0A576 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
TCRBV9S1A1TA0A576 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TCRBV9S1A1TA0A576 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC19.83■□□□□ 0.77
TCRBV9S1A1TA0A576 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC19.83■□□□□ 0.77
TCRBV9S1A1TA0A576 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TCRBV9S1A1TA0A576 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC19.83■□□□□ 0.77
TCRBV9S1A1TA0A576 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC19.83■□□□□ 0.77
TCRBV9S1A1TA0A576 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TCRBV9S1A1TA0A576 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TCRBV9S1A1TA0A576 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TCRBV9S1A1TA0A576 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.76
TCRBV9S1A1TA0A576 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
TCRBV9S1A1TA0A576 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
TCRBV9S1A1TA0A576 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
TCRBV9S1A1TA0A576 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TCRBV9S1A1TA0A576 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
TCRBV9S1A1TA0A576 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TCRBV9S1A1TA0A576 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
TCRBV9S1A1TA0A576 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TCRBV9S1A1TA0A576 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TCRBV9S1A1TA0A576 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TCRBV9S1A1TA0A576 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.82■□□□□ 0.76
TCRBV9S1A1TA0A576 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TCRBV9S1A1TA0A576 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
TCRBV9S1A1TA0A576 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TCRBV9S1A1TA0A576 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TCRBV9S1A1TA0A576 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TCRBV9S1A1TA0A576 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TCRBV9S1A1TA0A576 ME3-201ENST00000323418 1068 ntTSL 5 BASIC19.82■□□□□ 0.76
TCRBV9S1A1TA0A576 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TCRBV9S1A1TA0A576 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC19.82■□□□□ 0.76
TCRBV9S1A1TA0A576 PARP1-210ENST00000629232 477 ntTSL 5 BASIC19.82■□□□□ 0.76
TCRBV9S1A1TA0A576 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
TCRBV9S1A1TA0A576 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TCRBV9S1A1TA0A576 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
TCRBV9S1A1TA0A576 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.82■□□□□ 0.76
TCRBV9S1A1TA0A576 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
TCRBV9S1A1TA0A576 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
TCRBV9S1A1TA0A576 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.82■□□□□ 0.76
TCRBV9S1A1TA0A576 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TCRBV9S1A1TA0A576 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
TCRBV9S1A1TA0A576 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.81■□□□□ 0.76
TCRBV9S1A1TA0A576 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
TCRBV9S1A1TA0A576 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
TCRBV9S1A1TA0A576 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TCRBV9S1A1TA0A576 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.81■□□□□ 0.76
TCRBV9S1A1TA0A576 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms