Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 AOX3P-204ENST00000491025 2107 ntBASIC6.88□□□□□ -1.31
HMGCS2P54868 STXBP5-201ENST00000321680 3456 ntAPPRIS ALT1 TSL 5 BASIC6.88□□□□□ -1.31
HMGCS2P54868 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
HMGCS2P54868 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
HMGCS2P54868 AL359551.1-201ENST00000442726 2900 ntTSL 2 BASIC6.87□□□□□ -1.31
HMGCS2P54868 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
HMGCS2P54868 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
HMGCS2P54868 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
HMGCS2P54868 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
HMGCS2P54868 AC092692.1-201ENST00000623625 2595 ntBASIC6.87□□□□□ -1.31
HMGCS2P54868 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
HMGCS2P54868 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
HMGCS2P54868 NPM1P4-201ENST00000414095 812 ntBASIC6.87□□□□□ -1.31
HMGCS2P54868 AL596448.1-201ENST00000415024 392 ntBASIC6.87□□□□□ -1.31
HMGCS2P54868 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC6.87□□□□□ -1.31
HMGCS2P54868 PTCD2P2-201ENST00000415579 1095 ntBASIC6.87□□□□□ -1.31
HMGCS2P54868 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
HMGCS2P54868 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC6.87□□□□□ -1.31
HMGCS2P54868 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC6.87□□□□□ -1.31
HMGCS2P54868 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
HMGCS2P54868 RN7SL72P-201ENST00000460697 269 ntBASIC6.87□□□□□ -1.31
HMGCS2P54868 AC099521.1-201ENST00000482557 334 ntBASIC6.87□□□□□ -1.31
HMGCS2P54868 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC6.87□□□□□ -1.31
HMGCS2P54868 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC6.87□□□□□ -1.31
HMGCS2P54868 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC6.87□□□□□ -1.31
HMGCS2P54868 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC6.87□□□□□ -1.31
HMGCS2P54868 IGLV2-28-201ENST00000520681 304 ntBASIC6.87□□□□□ -1.31
HMGCS2P54868 TPM3P3-201ENST00000521343 354 ntBASIC6.87□□□□□ -1.31
HMGCS2P54868 MINCR-206ENST00000524335 499 ntTSL 2 BASIC6.87□□□□□ -1.31
HMGCS2P54868 AP005639.1-201ENST00000526939 192 ntBASIC6.87□□□□□ -1.31
HMGCS2P54868 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC6.87□□□□□ -1.31
HMGCS2P54868 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC6.87□□□□□ -1.31
HMGCS2P54868 TXNP4-201ENST00000575018 310 ntBASIC6.87□□□□□ -1.31
HMGCS2P54868 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC6.87□□□□□ -1.31
HMGCS2P54868 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC6.87□□□□□ -1.31
HMGCS2P54868 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
HMGCS2P54868 AC024589.2-201ENST00000605642 1294 ntBASIC6.87□□□□□ -1.31
HMGCS2P54868 AC243571.1-201ENST00000615743 478 ntTSL 3 BASIC6.87□□□□□ -1.31
HMGCS2P54868 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC6.87□□□□□ -1.31
HMGCS2P54868 AC130448.2-201ENST00000624082 374 ntBASIC6.87□□□□□ -1.31
HMGCS2P54868 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC6.87□□□□□ -1.31
HMGCS2P54868 AC110373.1-201ENST00000505994 3505 ntBASIC6.87□□□□□ -1.31
HMGCS2P54868 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
HMGCS2P54868 PYROXD1-201ENST00000240651 4055 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
HMGCS2P54868 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
HMGCS2P54868 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
HMGCS2P54868 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
HMGCS2P54868 AC062029.1-202ENST00000606164 3651 ntBASIC6.87□□□□□ -1.31
HMGCS2P54868 RALBP1-206ENST00000609094 3676 ntTSL 2 BASIC6.87□□□□□ -1.31
HMGCS2P54868 EGFEM1P-205ENST00000483846 2327 ntTSL 5 BASIC6.87□□□□□ -1.31
HMGCS2P54868 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC6.87□□□□□ -1.31
HMGCS2P54868 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
HMGCS2P54868 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC6.86□□□□□ -1.31
HMGCS2P54868 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC6.86□□□□□ -1.31
HMGCS2P54868 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
HMGCS2P54868 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
HMGCS2P54868 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
HMGCS2P54868 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
HMGCS2P54868 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
HMGCS2P54868 MRAP-202ENST00000339944 440 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
HMGCS2P54868 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC6.86□□□□□ -1.31
HMGCS2P54868 OR6E1P-201ENST00000414424 923 ntBASIC6.86□□□□□ -1.31
HMGCS2P54868 AC099677.3-201ENST00000427081 395 ntBASIC6.86□□□□□ -1.31
HMGCS2P54868 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC6.86□□□□□ -1.31
HMGCS2P54868 SDC4P-201ENST00000453285 601 ntBASIC6.86□□□□□ -1.31
HMGCS2P54868 RAB28P2-201ENST00000454299 641 ntBASIC6.86□□□□□ -1.31
HMGCS2P54868 RN7SL352P-201ENST00000466002 277 ntBASIC6.86□□□□□ -1.31
HMGCS2P54868 RN7SL799P-201ENST00000475891 298 ntBASIC6.86□□□□□ -1.31
HMGCS2P54868 AC022215.1-201ENST00000481770 362 ntBASIC6.86□□□□□ -1.31
HMGCS2P54868 AC108693.1-201ENST00000496068 432 ntBASIC6.86□□□□□ -1.31
HMGCS2P54868 RNU6-615P-201ENST00000516065 106 ntBASIC6.86□□□□□ -1.31
HMGCS2P54868 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
HMGCS2P54868 HMGB1P42-201ENST00000532126 553 ntBASIC6.86□□□□□ -1.31
HMGCS2P54868 SMARCE1P3-201ENST00000553649 1231 ntBASIC6.86□□□□□ -1.31
HMGCS2P54868 DPPA2P4-201ENST00000563717 878 ntBASIC6.86□□□□□ -1.31
HMGCS2P54868 AC090651.1-201ENST00000567865 634 ntBASIC6.86□□□□□ -1.31
HMGCS2P54868 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC6.86□□□□□ -1.31
HMGCS2P54868 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC6.86□□□□□ -1.31
HMGCS2P54868 AL139099.4-201ENST00000614802 114 ntBASIC6.86□□□□□ -1.31
HMGCS2P54868 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC6.86□□□□□ -1.31
HMGCS2P54868 CU639417.4-201ENST00000623928 207 ntBASIC6.86□□□□□ -1.31
HMGCS2P54868 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
HMGCS2P54868 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
HMGCS2P54868 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
HMGCS2P54868 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
HMGCS2P54868 APELA-202ENST00000507152 2602 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
HMGCS2P54868 NUP93-202ENST00000542526 8257 ntTSL 2 BASIC6.86□□□□□ -1.31
HMGCS2P54868 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC6.86□□□□□ -1.31
HMGCS2P54868 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
HMGCS2P54868 PRLR-212ENST00000513753 1525 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
HMGCS2P54868 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
HMGCS2P54868 PLD5-203ENST00000427495 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
HMGCS2P54868 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC6.85□□□□□ -1.31
HMGCS2P54868 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC6.85□□□□□ -1.31
HMGCS2P54868 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
HMGCS2P54868 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
HMGCS2P54868 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC6.85□□□□□ -1.31
HMGCS2P54868 POT1-202ENST00000393329 3950 ntTSL 5 BASIC6.85□□□□□ -1.31
HMGCS2P54868 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC6.85□□□□□ -1.31
HMGCS2P54868 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms