RNA–Protein interactions for RNA: ENST00000563746.5

RPGRIP1L-205, Transcript of RPGRIP1 like, humanhuman

TSL 1 (best) BASIC

Gene RPGRIP1L, Length 4,193 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1L-205ENST00000563746 CHIC1Q5VXU3 224 aa13.91□□□□□ -0.18
RPGRIP1L-205ENST00000563746 AEBP2Q6ZN18 517 aaPredicted RBP13.79□□□□□ -0.2
RPGRIP1L-205ENST00000563746 NISCHQ9Y2I1 1504 aa12.65□□□□□ -0.38
RPGRIP1L-205ENST00000563746 PHF23Q9BUL5 403 aaPredicted RBP12.64□□□□□ -0.39
RPGRIP1L-205ENST00000563746 EHMT2Q96KQ7 1210 aa12.1□□□□□ -0.47
RPGRIP1L-205ENST00000563746 PLPPR3Q6T4P5 718 aa11.62□□□□□ -0.55
RPGRIP1L-205ENST00000563746 KCNA4P22459 653 aa11.53□□□□□ -0.56
RPGRIP1L-205ENST00000563746 ADRA2BP18089 450 aa11.45□□□□□ -0.58
RPGRIP1L-205ENST00000563746 SHROOM4Q9ULL8 1493 aa11.28□□□□□ -0.6
RPGRIP1L-205ENST00000563746 SUPT5HO00267 1087 aaKnown RBP11.28□□□□□ -0.6
RPGRIP1L-205ENST00000563746 CSRNP3Q8WYN3 585 aa11.22□□□□□ -0.61
RPGRIP1L-205ENST00000563746 SLC24A1O60721 1099 aa11.13□□□□□ -0.63
RPGRIP1L-205ENST00000563746 SENP3Q9H4L4 574 aaPredicted RBP11.1□□□□□ -0.63
RPGRIP1L-205ENST00000563746 DCAF8L2P0C7V8 631 aa11.06□□□□□ -0.64
RPGRIP1L-205ENST00000563746 PPP6R1Q9UPN7 881 aa11.05□□□□□ -0.64
RPGRIP1L-205ENST00000563746 RTN4Q9NQC3 1192 aaKnown RBP10.95□□□□□ -0.66
RPGRIP1L-205ENST00000563746 SLC4A1APQ9BWU0 796 aaKnown RBP10.92□□□□□ -0.66
RPGRIP1L-205ENST00000563746 HRCP23327 699 aa10.91□□□□□ -0.66
RPGRIP1L-205ENST00000563746 PCGF6Q9BYE7 350 aa10.9□□□□□ -0.67
RPGRIP1L-205ENST00000563746 ZBTB22O15209 634 aa10.71□□□□□ -0.69
RPGRIP1L-205ENST00000563746 ZCCHC6Q5VYS8 1495 aaKnown RBP10.68□□□□□ -0.7
RPGRIP1L-205ENST00000563746 PPARGC1BQ86YN6 1023 aaKnown RBP10.62□□□□□ -0.71
RPGRIP1L-205ENST00000563746 TRIM26Q12899 539 aaPredicted RBP10.6□□□□□ -0.71
RPGRIP1L-205ENST00000563746 ZEB1P37275 1124 aaPredicted RBP10.59□□□□□ -0.71
RPGRIP1L-205ENST00000563746 MYO15BQ96JP2 1530 aa10.59□□□□□ -0.71
RPGRIP1L-205ENST00000563746 LOC105371045A0A1W2PR82 267 aa10.58□□□□□ -0.72
RPGRIP1L-205ENST00000563746 FOXD1Q16676 465 aa10.54□□□□□ -0.72
RPGRIP1L-205ENST00000563746 CCDC180Q9P1Z9 1646 aa10.53□□□□□ -0.72
RPGRIP1L-205ENST00000563746 PPP4R3CPQ6ZMV5 832 aa10.51□□□□□ -0.73
RPGRIP1L-205ENST00000563746 DCAF1Q9Y4B6 1507 aa10.51□□□□□ -0.73
RPGRIP1L-205ENST00000563746 PELP1Q8IZL8 1130 aaKnown RBP10.49□□□□□ -0.73
RPGRIP1L-205ENST00000563746 TRIM41Q8WV44 630 aa10.48□□□□□ -0.73
RPGRIP1L-205ENST00000563746 FAM9AQ8IZU1 332 aaPredicted RBP10.46□□□□□ -0.73
RPGRIP1L-205ENST00000563746 NPM3O75607 178 aaKnown RBP10.42□□□□□ -0.74
RPGRIP1L-205ENST00000563746 AMER1Q5JTC6 1135 aaPredicted RBP10.37□□□□□ -0.75
RPGRIP1L-205ENST00000563746 CCER1Q8TC90 406 aaPredicted RBP10.28□□□□□ -0.76
RPGRIP1L-205ENST00000563746 CENPBP07199 599 aaPredicted RBP10.25□□□□□ -0.77
RPGRIP1L-205ENST00000563746 PRKCSHP14314 528 aaPredicted RBP10.22□□□□□ -0.77
RPGRIP1L-205ENST00000563746 PIAS4Q8N2W9 510 aaPredicted RBP10.18□□□□□ -0.78
RPGRIP1L-205ENST00000563746 TTBK1Q5TCY1 1321 aaPredicted RBP10.16□□□□□ -0.78
RPGRIP1L-205ENST00000563746 NCBP3Q53F19 620 aaKnown RBP10.15□□□□□ -0.78
RPGRIP1L-205ENST00000563746 FKBP8Q14318 412 aa10.15□□□□□ -0.79
RPGRIP1L-205ENST00000563746 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.14□□□□□ -0.79
RPGRIP1L-205ENST00000563746 RSF1Q96T23 1441 aaPredicted RBP10.13□□□□□ -0.79
RPGRIP1L-205ENST00000563746 SCAF1Q9H7N4 1312 aaKnown RBP10.12□□□□□ -0.79
RPGRIP1L-205ENST00000563746 MYT1Q01538 1121 aa10.11□□□□□ -0.79
RPGRIP1L-205ENST00000563746 SCRIBQ14160 1630 aa10.09□□□□□ -0.79
RPGRIP1L-205ENST00000563746 DIEXFQ68CQ4 756 aaKnown RBP10.09□□□□□ -0.79
RPGRIP1L-205ENST00000563746 ABCC9O60706 1549 aa10.09□□□□□ -0.79
RPGRIP1L-205ENST00000563746 ACIN1Q9UKV3 1341 aaKnown RBP10.08□□□□□ -0.8
RPGRIP1L-205ENST00000563746 UBTFP17480 764 aaKnown RBP10.05□□□□□ -0.8
RPGRIP1L-205ENST00000563746 APLP2Q06481 763 aa10.03□□□□□ -0.8
RPGRIP1L-205ENST00000563746 RB1CC1Q8TDY2 1594 aa10.02□□□□□ -0.81
RPGRIP1L-205ENST00000563746 GTF3C3Q9Y5Q9 886 aa10.02□□□□□ -0.81
RPGRIP1L-205ENST00000563746 FOXD4L1Q9NU39 408 aa10.01□□□□□ -0.81
RPGRIP1L-205ENST00000563746 YTHDC1Q96MU7 727 aaKnown RBP10□□□□□ -0.81
RPGRIP1L-205ENST00000563746 NEUROD1Q13562 356 aa9.98□□□□□ -0.81
RPGRIP1L-205ENST00000563746 ZNF316A6NFI3 1004 aaPredicted RBP9.94□□□□□ -0.82
RPGRIP1L-205ENST00000563746 HNRNPUL2Q1KMD3 747 aaKnown RBP9.9□□□□□ -0.82
RPGRIP1L-205ENST00000563746 MAPK8IP2Q13387 824 aaPredicted RBP9.88□□□□□ -0.83
RPGRIP1L-205ENST00000563746 CECR2Q9BXF3 1484 aa9.87□□□□□ -0.83
RPGRIP1L-205ENST00000563746 RANGAP1P46060 587 aaPredicted RBP9.85□□□□□ -0.83
RPGRIP1L-205ENST00000563746 NACADO15069 1562 aa9.83□□□□□ -0.84
RPGRIP1L-205ENST00000563746 MROH2BQ7Z745 1585 aa9.83□□□□□ -0.84
RPGRIP1L-205ENST00000563746 CEP162Q5TB80 1403 aa9.83□□□□□ -0.84
RPGRIP1L-205ENST00000563746 CNKSR2Q8WXI2 1034 aa9.81□□□□□ -0.84
RPGRIP1L-205ENST00000563746 TNIKQ9UKE5 1360 aa9.8□□□□□ -0.84
RPGRIP1L-205ENST00000563746 EEA1Q15075 1411 aa9.78□□□□□ -0.84
RPGRIP1L-205ENST00000563746 HAP1P54257 671 aaPredicted RBP9.78□□□□□ -0.84
RPGRIP1L-205ENST00000563746 WIZO95785 1651 aa9.76□□□□□ -0.85
RPGRIP1L-205ENST00000563746 BAZ1AQ9NRL2 1556 aaPredicted RBP9.76□□□□□ -0.85
RPGRIP1L-205ENST00000563746 WRNQ14191 1432 aaPredicted RBP eCLIP9.75□□□□□ -0.85
RPGRIP1L-205ENST00000563746 MIER1Q8N108 512 aa9.74□□□□□ -0.85
RPGRIP1L-205ENST00000563746 PLCB2Q00722 1185 aa9.73□□□□□ -0.85
RPGRIP1L-205ENST00000563746 GOLGA3Q08378 1498 aa9.72□□□□□ -0.85
RPGRIP1L-205ENST00000563746 CCDC88BA6NC98 1476 aa9.7□□□□□ -0.86
RPGRIP1L-205ENST00000563746 SOGA1O94964 1423 aa9.7□□□□□ -0.86
RPGRIP1L-205ENST00000563746 TAOK2Q9UL54 1235 aa9.7□□□□□ -0.86
RPGRIP1L-205ENST00000563746 ABCC8Q09428 1581 aa9.69□□□□□ -0.86
RPGRIP1L-205ENST00000563746 TPRNQ4KMQ1 711 aa9.69□□□□□ -0.86
RPGRIP1L-205ENST00000563746 CLSPNQ9HAW4 1339 aa9.69□□□□□ -0.86
RPGRIP1L-205ENST00000563746 SLC4A2P04920 1241 aa9.68□□□□□ -0.86
RPGRIP1L-205ENST00000563746 CLIP1P30622 1438 aa9.67□□□□□ -0.86
RPGRIP1L-205ENST00000563746 TOP2AP11388 1531 aaKnown RBP9.65□□□□□ -0.86
RPGRIP1L-205ENST00000563746 NEFLP07196 543 aa9.64□□□□□ -0.87
RPGRIP1L-205ENST00000563746 PABPN1Q86U42 306 aaKnown RBP eCLIP9.64□□□□□ -0.87
RPGRIP1L-205ENST00000563746 CEP164Q9UPV0 1460 aa9.64□□□□□ -0.87
RPGRIP1L-205ENST00000563746 ITGAEP38570 1179 aa9.64□□□□□ -0.87
RPGRIP1L-205ENST00000563746 TIMELESSQ9UNS1 1208 aa9.58□□□□□ -0.88
RPGRIP1L-205ENST00000563746 VPS8Q8N3P4 1428 aa9.57□□□□□ -0.88
RPGRIP1L-205ENST00000563746 RUSC2Q8N2Y8 1516 aa9.57□□□□□ -0.88
RPGRIP1L-205ENST00000563746 FBLN2P98095 1184 aa9.57□□□□□ -0.88
RPGRIP1L-205ENST00000563746 SMARCA2P51531 1590 aa9.55□□□□□ -0.88
RPGRIP1L-205ENST00000563746 SMARCA4P51532 1647 aa9.55□□□□□ -0.88
RPGRIP1L-205ENST00000563746 BCANQ96GW7 911 aa9.55□□□□□ -0.88
RPGRIP1L-205ENST00000563746 ATP1B4Q9UN42 357 aaPredicted RBP9.55□□□□□ -0.88
RPGRIP1L-205ENST00000563746 ATF5Q9Y2D1 282 aaPredicted RBP9.54□□□□□ -0.88
RPGRIP1L-205ENST00000563746 TULP1O00294 542 aaPredicted RBP9.52□□□□□ -0.89
RPGRIP1L-205ENST00000563746 SUPT16HQ9Y5B9 1047 aaKnown RBP9.51□□□□□ -0.89
RPGRIP1L-205ENST00000563746 KDM2AQ9Y2K7 1162 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms