RNA–Protein interactions for RNA: ENST00000367049.8

CR1-201, Transcript of complement C3b/C4b receptor 1 (Knops blood group), humanhuman

APPRIS P1 TSL 5 BASIC

Gene CR1, Length 7,470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CR1-201ENST00000367049 NISCHQ9Y2I1 1504 aa12.91□□□□□ -0.34
CR1-201ENST00000367049 SHROOM4Q9ULL8 1493 aa11.23□□□□□ -0.61
CR1-201ENST00000367049 DCAF8L2P0C7V8 631 aa11.18□□□□□ -0.62
CR1-201ENST00000367049 SUPT5HO00267 1087 aaKnown RBP11.1□□□□□ -0.63
CR1-201ENST00000367049 CCDC180Q9P1Z9 1646 aa10.92□□□□□ -0.66
CR1-201ENST00000367049 ZCCHC6Q5VYS8 1495 aaKnown RBP10.85□□□□□ -0.67
CR1-201ENST00000367049 CHIC1Q5VXU3 224 aa10.6□□□□□ -0.71
CR1-201ENST00000367049 DCAF1Q9Y4B6 1507 aa10.51□□□□□ -0.73
CR1-201ENST00000367049 PCGF6Q9BYE7 350 aa10.4□□□□□ -0.74
CR1-201ENST00000367049 ABCC9O60706 1549 aa10.35□□□□□ -0.75
CR1-201ENST00000367049 MYO15BQ96JP2 1530 aa10.35□□□□□ -0.75
CR1-201ENST00000367049 SCRIBQ14160 1630 aa10.35□□□□□ -0.75
CR1-201ENST00000367049 LOC105371045A0A1W2PR82 267 aa10.34□□□□□ -0.75
CR1-201ENST00000367049 TRIM41Q8WV44 630 aa10.33□□□□□ -0.76
CR1-201ENST00000367049 FAM9AQ8IZU1 332 aaPredicted RBP10.29□□□□□ -0.76
CR1-201ENST00000367049 HRCP23327 699 aa10.26□□□□□ -0.77
CR1-201ENST00000367049 EHMT2Q96KQ7 1210 aa10.25□□□□□ -0.77
CR1-201ENST00000367049 RSF1Q96T23 1441 aaPredicted RBP10.23□□□□□ -0.77
CR1-201ENST00000367049 NACADO15069 1562 aa10.19□□□□□ -0.78
CR1-201ENST00000367049 TRIM26Q12899 539 aaPredicted RBP10.16□□□□□ -0.78
CR1-201ENST00000367049 RB1CC1Q8TDY2 1594 aa10.09□□□□□ -0.79
CR1-201ENST00000367049 CECR2Q9BXF3 1484 aa10.08□□□□□ -0.8
CR1-201ENST00000367049 PPARGC1BQ86YN6 1023 aaKnown RBP10.04□□□□□ -0.8
CR1-201ENST00000367049 MROH2BQ7Z745 1585 aa10.02□□□□□ -0.8
CR1-201ENST00000367049 ZEB1P37275 1124 aaPredicted RBP10□□□□□ -0.81
CR1-201ENST00000367049 PABPN1Q86U42 306 aaKnown RBP eCLIP9.97□□□□□ -0.81
CR1-201ENST00000367049 WIZO95785 1651 aa9.97□□□□□ -0.81
CR1-201ENST00000367049 BAZ1AQ9NRL2 1556 aaPredicted RBP9.97□□□□□ -0.81
CR1-201ENST00000367049 UBTFP17480 764 aaKnown RBP9.92□□□□□ -0.82
CR1-201ENST00000367049 TTBK1Q5TCY1 1321 aaPredicted RBP9.91□□□□□ -0.82
CR1-201ENST00000367049 CCER1Q8TC90 406 aaPredicted RBP9.86□□□□□ -0.83
CR1-201ENST00000367049 SMARCA4P51532 1647 aa9.82□□□□□ -0.84
CR1-201ENST00000367049 CSRNP3Q8WYN3 585 aa9.81□□□□□ -0.84
CR1-201ENST00000367049 TOP2AP11388 1531 aaKnown RBP9.81□□□□□ -0.84
CR1-201ENST00000367049 CCDC88BA6NC98 1476 aa9.8□□□□□ -0.84
CR1-201ENST00000367049 APLP2Q06481 763 aa9.8□□□□□ -0.84
CR1-201ENST00000367049 ABCC8Q09428 1581 aa9.78□□□□□ -0.84
CR1-201ENST00000367049 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.78□□□□□ -0.84
CR1-201ENST00000367049 UNC13AQ9UPW8 1703 aa9.77□□□□□ -0.85
CR1-201ENST00000367049 RANGAP1P46060 587 aaPredicted RBP9.76□□□□□ -0.85
CR1-201ENST00000367049 SMARCA2P51531 1590 aa9.73□□□□□ -0.85
CR1-201ENST00000367049 EEA1Q15075 1411 aa9.73□□□□□ -0.85
CR1-201ENST00000367049 SOGA1O94964 1423 aa9.71□□□□□ -0.86
CR1-201ENST00000367049 WRNQ14191 1432 aaPredicted RBP eCLIP9.7□□□□□ -0.86
CR1-201ENST00000367049 CEP162Q5TB80 1403 aa9.7□□□□□ -0.86
CR1-201ENST00000367049 BAZ1BQ9UIG0 1483 aaKnown RBP9.68□□□□□ -0.86
CR1-201ENST00000367049 TNIKQ9UKE5 1360 aa9.68□□□□□ -0.86
CR1-201ENST00000367049 GOLGA3Q08378 1498 aa9.65□□□□□ -0.87
CR1-201ENST00000367049 HNRNPUL2Q1KMD3 747 aaKnown RBP9.64□□□□□ -0.87
CR1-201ENST00000367049 BICRAQ9NZM4 1560 aa9.63□□□□□ -0.87
CR1-201ENST00000367049 EIF4G1Q04637 1599 aaKnown RBP9.62□□□□□ -0.87
CR1-201ENST00000367049 ATAD2BQ9ULI0 1458 aa9.62□□□□□ -0.87
CR1-201ENST00000367049 RUSC2Q8N2Y8 1516 aa9.62□□□□□ -0.87
CR1-201ENST00000367049 CEP164Q9UPV0 1460 aa9.6□□□□□ -0.87
CR1-201ENST00000367049 CLIP1P30622 1438 aa9.59□□□□□ -0.87
CR1-201ENST00000367049 DIEXFQ68CQ4 756 aaKnown RBP9.58□□□□□ -0.88
CR1-201ENST00000367049 CENPBP07199 599 aaPredicted RBP9.55□□□□□ -0.88
CR1-201ENST00000367049 PEG3Q9GZU2 1588 aa9.55□□□□□ -0.88
CR1-201ENST00000367049 SYNJ1O43426 1573 aa9.51□□□□□ -0.89
CR1-201ENST00000367049 VPS8Q8N3P4 1428 aa9.48□□□□□ -0.89
CR1-201ENST00000367049 RAPGEF2Q9Y4G8 1499 aa9.48□□□□□ -0.89
CR1-201ENST00000367049 ATP1B4Q9UN42 357 aaPredicted RBP9.48□□□□□ -0.89
CR1-201ENST00000367049 ZNF316A6NFI3 1004 aaPredicted RBP9.48□□□□□ -0.89
CR1-201ENST00000367049 KIF27Q86VH2 1401 aa9.46□□□□□ -0.89
CR1-201ENST00000367049 ITGAEP38570 1179 aa9.46□□□□□ -0.89
CR1-201ENST00000367049 KIF21BO75037 1637 aa9.46□□□□□ -0.9
CR1-201ENST00000367049 YTHDC1Q96MU7 727 aaKnown RBP9.42□□□□□ -0.9
CR1-201ENST00000367049 NCAPD3P42695 1498 aa9.42□□□□□ -0.9
CR1-201ENST00000367049 TOP2BQ02880 1626 aa9.41□□□□□ -0.9
CR1-201ENST00000367049 ACIN1Q9UKV3 1341 aaKnown RBP9.4□□□□□ -0.9
CR1-201ENST00000367049 SCAF1Q9H7N4 1312 aaKnown RBP9.39□□□□□ -0.91
CR1-201ENST00000367049 HMGXB3Q12766 1538 aa9.38□□□□□ -0.91
CR1-201ENST00000367049 PELP1Q8IZL8 1130 aaKnown RBP9.37□□□□□ -0.91
CR1-201ENST00000367049 NEUROD1Q13562 356 aa9.36□□□□□ -0.91
CR1-201ENST00000367049 CUX2O14529 1486 aa9.35□□□□□ -0.91
CR1-201ENST00000367049 P3H3Q8IVL6 736 aa9.35□□□□□ -0.91
CR1-201ENST00000367049 CFTRP13569 1480 aa9.34□□□□□ -0.91
CR1-201ENST00000367049 KANK4Q5T7N3 995 aaPredicted RBP9.34□□□□□ -0.91
CR1-201ENST00000367049 GTF3C3Q9Y5Q9 886 aa9.34□□□□□ -0.91
CR1-201ENST00000367049 FAM50AQ14320 339 aaKnown RBP9.34□□□□□ -0.91
CR1-201ENST00000367049 ERICH3Q5RHP9 1530 aa9.34□□□□□ -0.91
CR1-201ENST00000367049 PRXQ9BXM0 1461 aa9.33□□□□□ -0.92
CR1-201ENST00000367049 CADPSQ9ULU8 1353 aa9.33□□□□□ -0.92
CR1-201ENST00000367049 CUX1P39880 1505 aa9.33□□□□□ -0.92
CR1-201ENST00000367049 BIVM-ERCC5R4GMW8 1640 aa9.32□□□□□ -0.92
CR1-201ENST00000367049 CARMIL1Q5VZK9 1371 aa9.32□□□□□ -0.92
CR1-201ENST00000367049 CLSPNQ9HAW4 1339 aa9.31□□□□□ -0.92
CR1-201ENST00000367049 CCNB3Q8WWL7 1395 aa9.29□□□□□ -0.92
CR1-201ENST00000367049 MIER1Q8N108 512 aa9.29□□□□□ -0.92
CR1-201ENST00000367049 ARAP1Q96P48 1450 aa9.28□□□□□ -0.92
CR1-201ENST00000367049 IGF1RP08069 1367 aa9.27□□□□□ -0.93
CR1-201ENST00000367049 FGD5Q6ZNL6 1462 aa9.25□□□□□ -0.93
CR1-201ENST00000367049 FHAD1B1AJZ9 1412 aa9.25□□□□□ -0.93
CR1-201ENST00000367049 ARHGAP35Q9NRY4 1499 aa9.24□□□□□ -0.93
CR1-201ENST00000367049 FANCD2Q9BXW9 1451 aa9.23□□□□□ -0.93
CR1-201ENST00000367049 DHX57Q6P158 1386 aaKnown RBP9.22□□□□□ -0.93
CR1-201ENST00000367049 CC2D2AQ9P2K1 1620 aa9.2□□□□□ -0.94
CR1-201ENST00000367049 PRDM2Q13029 1718 aa9.19□□□□□ -0.94
CR1-201ENST00000367049 MTUS2Q5JR59 1369 aa9.18□□□□□ -0.94
CR1-201ENST00000367049 RRBP1Q9P2E9 1410 aaKnown RBP9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms