RNA–Protein interactions for RNA: ENST00000521343.1

TPM3P3-201, Transcript of tropomyosin 3 pseudogene 3, humanhuman

BASIC

Gene TPM3P3, Length 354 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P3-201ENST00000521343 AEBP2Q6ZN18 517 aaPredicted RBP20.53■□□□□ 0.88
TPM3P3-201ENST00000521343 CHIC1Q5VXU3 224 aa19.39■□□□□ 0.69
TPM3P3-201ENST00000521343 SENP3Q9H4L4 574 aaPredicted RBP17.65■□□□□ 0.42
TPM3P3-201ENST00000521343 PHF23Q9BUL5 403 aaPredicted RBP17.37■□□□□ 0.37
TPM3P3-201ENST00000521343 FOXD1Q16676 465 aa16.41■□□□□ 0.22
TPM3P3-201ENST00000521343 MSH5O43196 834 aa15.5■□□□□ 0.07
TPM3P3-201ENST00000521343 PLPPR3Q6T4P5 718 aa15.46■□□□□ 0.07
TPM3P3-201ENST00000521343 POTEDQ86YR6 584 aa15.37■□□□□ 0.05
TPM3P3-201ENST00000521343 PIAS4Q8N2W9 510 aaPredicted RBP15.34■□□□□ 0.05
TPM3P3-201ENST00000521343 PPP6R1Q9UPN7 881 aa15.17■□□□□ 0.02
TPM3P3-201ENST00000521343 ADRA2BP18089 450 aa15.15■□□□□ 0.02
TPM3P3-201ENST00000521343 SCAF1Q9H7N4 1312 aaKnown RBP14□□□□□ -0.17
TPM3P3-201ENST00000521343 MAPK8IP2Q13387 824 aaPredicted RBP13.96□□□□□ -0.17
TPM3P3-201ENST00000521343 DMRT2Q9Y5R5 561 aa13.94□□□□□ -0.18
TPM3P3-201ENST00000521343 PPP4R3CPQ6ZMV5 832 aa13.51□□□□□ -0.25
TPM3P3-201ENST00000521343 NISCHQ9Y2I1 1504 aa13.48□□□□□ -0.25
TPM3P3-201ENST00000521343 DCAF8L1A6NGE4 600 aa13.45□□□□□ -0.26
TPM3P3-201ENST00000521343 CACNB1Q02641 598 aaPredicted RBP13.42□□□□□ -0.26
TPM3P3-201ENST00000521343 HOXD11P31277 338 aaPredicted RBP13.35□□□□□ -0.27
TPM3P3-201ENST00000521343 CNKSR2Q8WXI2 1034 aa13.32□□□□□ -0.28
TPM3P3-201ENST00000521343 RNF216Q9NWF9 866 aaPredicted RBP13.23□□□□□ -0.29
TPM3P3-201ENST00000521343 RNF39Q9H2S5 420 aa13.15□□□□□ -0.3
TPM3P3-201ENST00000521343 KCNA4P22459 653 aa13.06□□□□□ -0.32
TPM3P3-201ENST00000521343 C1QBPQ07021 282 aaKnown RBP13.01□□□□□ -0.33
TPM3P3-201ENST00000521343 NCBP3Q53F19 620 aaKnown RBP13.01□□□□□ -0.33
TPM3P3-201ENST00000521343 DNAJC5BQ9UF47 199 aa12.96□□□□□ -0.33
TPM3P3-201ENST00000521343 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.79□□□□□ -0.36
TPM3P3-201ENST00000521343 NPM3O75607 178 aaKnown RBP12.71□□□□□ -0.37
TPM3P3-201ENST00000521343 SLC4A1APQ9BWU0 796 aaKnown RBP12.45□□□□□ -0.42
TPM3P3-201ENST00000521343 EHMT2Q96KQ7 1210 aa12.42□□□□□ -0.42
TPM3P3-201ENST00000521343 U3KPZ7 1027 aaPredicted RBP12.42□□□□□ -0.42
TPM3P3-201ENST00000521343 CAPN15O75808 1086 aa12.35□□□□□ -0.43
TPM3P3-201ENST00000521343 SPINK5Q9NQ38 1064 aaPredicted RBP12.29□□□□□ -0.44
TPM3P3-201ENST00000521343 DSG3P32926 999 aa12.26□□□□□ -0.45
TPM3P3-201ENST00000521343 APLP2Q06481 763 aa12.2□□□□□ -0.46
TPM3P3-201ENST00000521343 SLC4A2P04920 1241 aa12.16□□□□□ -0.46
TPM3P3-201ENST00000521343 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.12□□□□□ -0.47
TPM3P3-201ENST00000521343 HNRNPUL2Q1KMD3 747 aaKnown RBP12.12□□□□□ -0.47
TPM3P3-201ENST00000521343 TRHP20396 242 aaPredicted RBP12.11□□□□□ -0.47
TPM3P3-201ENST00000521343 ZNF219Q9P2Y4 722 aaPredicted RBP12.09□□□□□ -0.47
TPM3P3-201ENST00000521343 CSRNP3Q8WYN3 585 aa12.08□□□□□ -0.48
TPM3P3-201ENST00000521343 ZBTB22O15209 634 aa12.03□□□□□ -0.48
TPM3P3-201ENST00000521343 POTEHQ6S545 545 aa12.03□□□□□ -0.48
TPM3P3-201ENST00000521343 SAMD1Q6SPF0 538 aaPredicted RBP12.02□□□□□ -0.49
TPM3P3-201ENST00000521343 ABCB7O75027 752 aa12.01□□□□□ -0.49
TPM3P3-201ENST00000521343 FOXD4L1Q9NU39 408 aa11.91□□□□□ -0.5
TPM3P3-201ENST00000521343 MYCNP04198 464 aaPredicted RBP11.81□□□□□ -0.52
TPM3P3-201ENST00000521343 RBM42Q9BTD8 480 aaKnown RBP11.8□□□□□ -0.52
TPM3P3-201ENST00000521343 POLA2Q14181 598 aa11.73□□□□□ -0.53
TPM3P3-201ENST00000521343 CCDC180Q9P1Z9 1646 aa11.6□□□□□ -0.55
TPM3P3-201ENST00000521343 CHRDL2Q6WN34 429 aa11.55□□□□□ -0.56
TPM3P3-201ENST00000521343 ZBTB12Q9Y330 459 aaPredicted RBP11.53□□□□□ -0.56
TPM3P3-201ENST00000521343 ATF5Q9Y2D1 282 aaPredicted RBP11.47□□□□□ -0.57
TPM3P3-201ENST00000521343 AKT1S1Q96B36 256 aa11.45□□□□□ -0.58
TPM3P3-201ENST00000521343 ATXN8OSP0DMR3 200 aa11.39□□□□□ -0.59
TPM3P3-201ENST00000521343 DCAF8L2P0C7V8 631 aa11.38□□□□□ -0.59
TPM3P3-201ENST00000521343 REM2Q8IYK8 340 aaPredicted RBP11.32□□□□□ -0.6
TPM3P3-201ENST00000521343 OSCARQ8IYS5 282 aa11.32□□□□□ -0.6
TPM3P3-201ENST00000521343 ZCCHC6Q5VYS8 1495 aaKnown RBP11.28□□□□□ -0.6
TPM3P3-201ENST00000521343 PIP4P2Q8N4L2 257 aa11.21□□□□□ -0.61
TPM3P3-201ENST00000521343 SP7Q8TDD2 431 aaPredicted RBP11.2□□□□□ -0.62
TPM3P3-201ENST00000521343 PITPNM1O00562 1244 aa11.18□□□□□ -0.62
TPM3P3-201ENST00000521343 FBLN2P98095 1184 aa11.17□□□□□ -0.62
TPM3P3-201ENST00000521343 ABCC9O60706 1549 aa11.15□□□□□ -0.62
TPM3P3-201ENST00000521343 HAX1O00165 279 aa11.13□□□□□ -0.63
TPM3P3-201ENST00000521343 SPDYE2BA6NHP3 402 aa11.12□□□□□ -0.63
TPM3P3-201ENST00000521343 SPDYE6P0CI01 402 aa11.12□□□□□ -0.63
TPM3P3-201ENST00000521343 FXR2P51116 673 aaKnown RBP eCLIP11.12□□□□□ -0.63
TPM3P3-201ENST00000521343 SPDYE2Q495Y8 402 aa11.12□□□□□ -0.63
TPM3P3-201ENST00000521343 SHROOM4Q9ULL8 1493 aa11.12□□□□□ -0.63
TPM3P3-201ENST00000521343 DCAF1Q9Y4B6 1507 aa11.11□□□□□ -0.63
TPM3P3-201ENST00000521343 SPDYE1Q8NFV5 336 aaPredicted RBP10.99□□□□□ -0.65
TPM3P3-201ENST00000521343 MYO15BQ96JP2 1530 aa10.99□□□□□ -0.65
TPM3P3-201ENST00000521343 ZNF692Q9BU19 519 aaPredicted RBP10.98□□□□□ -0.65
TPM3P3-201ENST00000521343 CLEC11AQ9Y240 323 aa10.98□□□□□ -0.65
TPM3P3-201ENST00000521343 FKBP8Q14318 412 aa10.96□□□□□ -0.65
TPM3P3-201ENST00000521343 MKRN4PQ13434 485 aaPredicted RBP10.93□□□□□ -0.66
TPM3P3-201ENST00000521343 NACADO15069 1562 aa10.92□□□□□ -0.66
TPM3P3-201ENST00000521343 PRKAR2AP13861 404 aaKnown RBP10.92□□□□□ -0.66
TPM3P3-201ENST00000521343 SSUH2Q9Y2M2 353 aa10.9□□□□□ -0.66
TPM3P3-201ENST00000521343 EVX2Q03828 476 aa10.86□□□□□ -0.67
TPM3P3-201ENST00000521343 RB1CC1Q8TDY2 1594 aa10.82□□□□□ -0.68
TPM3P3-201ENST00000521343 SUPT5HO00267 1087 aaKnown RBP10.79□□□□□ -0.68
TPM3P3-201ENST00000521343 PRR29P0C7W0 189 aa10.79□□□□□ -0.68
TPM3P3-201ENST00000521343 C19orf67A6NJJ6 358 aa10.78□□□□□ -0.68
TPM3P3-201ENST00000521343 PABPN1Q86U42 306 aaKnown RBP eCLIP10.78□□□□□ -0.68
TPM3P3-201ENST00000521343 SCRIBQ14160 1630 aa10.75□□□□□ -0.69
TPM3P3-201ENST00000521343 CHADLQ6NUI6 762 aa10.73□□□□□ -0.69
TPM3P3-201ENST00000521343 SPDYE4A6NLX3 237 aa10.72□□□□□ -0.69
TPM3P3-201ENST00000521343 GABBR2O75899 941 aa10.67□□□□□ -0.7
TPM3P3-201ENST00000521343 FARP1Q9Y4F1 1045 aaPredicted RBP10.58□□□□□ -0.72
TPM3P3-201ENST00000521343 CD44P16070 742 aaKnown RBP10.57□□□□□ -0.72
TPM3P3-201ENST00000521343 CLCN6P51797 869 aa10.53□□□□□ -0.72
TPM3P3-201ENST00000521343 LHX8Q68G74 356 aa10.52□□□□□ -0.73
TPM3P3-201ENST00000521343 STAG3Q9UJ98 1225 aa10.52□□□□□ -0.73
TPM3P3-201ENST00000521343 RSF1Q96T23 1441 aaPredicted RBP10.51□□□□□ -0.73
TPM3P3-201ENST00000521343 CECR2Q9BXF3 1484 aa10.5□□□□□ -0.73
TPM3P3-201ENST00000521343 PROM2Q8N271 834 aa10.48□□□□□ -0.73
TPM3P3-201ENST00000521343 BICRAQ9NZM4 1560 aa10.43□□□□□ -0.74
TPM3P3-201ENST00000521343 MROH2BQ7Z745 1585 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms