RNA–Protein interactions for RNA: ENST00000454299.2

RAB28P2-201, Transcript of RAB28, member RAS oncogene family pseudogene 2, humanhuman

BASIC

Gene RAB28P2, Length 641 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P2-201ENST00000454299 AEBP2Q6ZN18 517 aaPredicted RBP32.08■■■□□ 2.73
RAB28P2-201ENST00000454299 CHIC1Q5VXU3 224 aa30.85■■■□□ 2.53
RAB28P2-201ENST00000454299 SENP3Q9H4L4 574 aaPredicted RBP27.26■■□□□ 1.95
RAB28P2-201ENST00000454299 PHF23Q9BUL5 403 aaPredicted RBP27.11■■□□□ 1.93
RAB28P2-201ENST00000454299 FOXD1Q16676 465 aa25.39■■□□□ 1.66
RAB28P2-201ENST00000454299 PLPPR3Q6T4P5 718 aa24.86■■□□□ 1.57
RAB28P2-201ENST00000454299 PPP6R1Q9UPN7 881 aa24.09■■□□□ 1.45
RAB28P2-201ENST00000454299 ADRA2BP18089 450 aa24.08■■□□□ 1.45
RAB28P2-201ENST00000454299 PIAS4Q8N2W9 510 aaPredicted RBP23.87■■□□□ 1.41
RAB28P2-201ENST00000454299 MSH5O43196 834 aa23.55■■□□□ 1.36
RAB28P2-201ENST00000454299 POTEDQ86YR6 584 aa22.28■■□□□ 1.16
RAB28P2-201ENST00000454299 MAPK8IP2Q13387 824 aaPredicted RBP21.99■■□□□ 1.11
RAB28P2-201ENST00000454299 SCAF1Q9H7N4 1312 aaKnown RBP21.96■■□□□ 1.11
RAB28P2-201ENST00000454299 PPP4R3CPQ6ZMV5 832 aa21.88■■□□□ 1.09
RAB28P2-201ENST00000454299 DMRT2Q9Y5R5 561 aa21.68■■□□□ 1.06
RAB28P2-201ENST00000454299 CNKSR2Q8WXI2 1034 aa21.33■■□□□ 1.01
RAB28P2-201ENST00000454299 NCBP3Q53F19 620 aaKnown RBP21.16■□□□□ 0.98
RAB28P2-201ENST00000454299 HOXD11P31277 338 aaPredicted RBP21.02■□□□□ 0.96
RAB28P2-201ENST00000454299 RNF216Q9NWF9 866 aaPredicted RBP21.01■□□□□ 0.95
RAB28P2-201ENST00000454299 DCAF8L1A6NGE4 600 aa20.93■□□□□ 0.94
RAB28P2-201ENST00000454299 KCNA4P22459 653 aa20.9■□□□□ 0.94
RAB28P2-201ENST00000454299 NPM3O75607 178 aaKnown RBP20.87■□□□□ 0.93
RAB28P2-201ENST00000454299 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.15■□□□□ 0.82
RAB28P2-201ENST00000454299 RNF39Q9H2S5 420 aa20.14■□□□□ 0.81
RAB28P2-201ENST00000454299 DNAJC5BQ9UF47 199 aa20.13■□□□□ 0.81
RAB28P2-201ENST00000454299 CACNB1Q02641 598 aaPredicted RBP20.02■□□□□ 0.8
RAB28P2-201ENST00000454299 C1QBPQ07021 282 aaKnown RBP19.85■□□□□ 0.77
RAB28P2-201ENST00000454299 SLC4A1APQ9BWU0 796 aaKnown RBP19.81■□□□□ 0.76
RAB28P2-201ENST00000454299 SLC4A2P04920 1241 aa19.8■□□□□ 0.76
RAB28P2-201ENST00000454299 U3KPZ7 1027 aaPredicted RBP19.74■□□□□ 0.75
RAB28P2-201ENST00000454299 SPINK5Q9NQ38 1064 aaPredicted RBP19.36■□□□□ 0.69
RAB28P2-201ENST00000454299 CAPN15O75808 1086 aa19.33■□□□□ 0.68
RAB28P2-201ENST00000454299 FOXD4L1Q9NU39 408 aa19.32■□□□□ 0.68
RAB28P2-201ENST00000454299 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.28■□□□□ 0.68
RAB28P2-201ENST00000454299 HNRNPUL2Q1KMD3 747 aaKnown RBP19.28■□□□□ 0.68
RAB28P2-201ENST00000454299 MYCNP04198 464 aaPredicted RBP19.27■□□□□ 0.68
RAB28P2-201ENST00000454299 ZBTB22O15209 634 aa19.21■□□□□ 0.67
RAB28P2-201ENST00000454299 SAMD1Q6SPF0 538 aaPredicted RBP19.21■□□□□ 0.67
RAB28P2-201ENST00000454299 APLP2Q06481 763 aa19.19■□□□□ 0.66
RAB28P2-201ENST00000454299 TRHP20396 242 aaPredicted RBP19.15■□□□□ 0.66
RAB28P2-201ENST00000454299 DSG3P32926 999 aa19.03■□□□□ 0.64
RAB28P2-201ENST00000454299 ZNF219Q9P2Y4 722 aaPredicted RBP19.02■□□□□ 0.64
RAB28P2-201ENST00000454299 ABCB7O75027 752 aa18.95■□□□□ 0.62
RAB28P2-201ENST00000454299 ATF5Q9Y2D1 282 aaPredicted RBP18.85■□□□□ 0.61
RAB28P2-201ENST00000454299 EHMT2Q96KQ7 1210 aa18.83■□□□□ 0.6
RAB28P2-201ENST00000454299 CSRNP3Q8WYN3 585 aa18.71■□□□□ 0.59
RAB28P2-201ENST00000454299 POLA2Q14181 598 aa18.68■□□□□ 0.58
RAB28P2-201ENST00000454299 ATXN8OSP0DMR3 200 aa18.61■□□□□ 0.57
RAB28P2-201ENST00000454299 ZBTB12Q9Y330 459 aaPredicted RBP18.27■□□□□ 0.52
RAB28P2-201ENST00000454299 RBM42Q9BTD8 480 aaKnown RBP18.12■□□□□ 0.49
RAB28P2-201ENST00000454299 OSCARQ8IYS5 282 aa18.08■□□□□ 0.48
RAB28P2-201ENST00000454299 FBLN2P98095 1184 aa18.07■□□□□ 0.48
RAB28P2-201ENST00000454299 MKRN4PQ13434 485 aaPredicted RBP17.97■□□□□ 0.47
RAB28P2-201ENST00000454299 AKT1S1Q96B36 256 aa17.8■□□□□ 0.44
RAB28P2-201ENST00000454299 SPDYE2BA6NHP3 402 aa17.74■□□□□ 0.43
RAB28P2-201ENST00000454299 SPDYE6P0CI01 402 aa17.74■□□□□ 0.43
RAB28P2-201ENST00000454299 SPDYE2Q495Y8 402 aa17.74■□□□□ 0.43
RAB28P2-201ENST00000454299 REM2Q8IYK8 340 aaPredicted RBP17.67■□□□□ 0.42
RAB28P2-201ENST00000454299 ZNF692Q9BU19 519 aaPredicted RBP17.67■□□□□ 0.42
RAB28P2-201ENST00000454299 CHRDL2Q6WN34 429 aa17.59■□□□□ 0.41
RAB28P2-201ENST00000454299 POTEHQ6S545 545 aa17.55■□□□□ 0.4
RAB28P2-201ENST00000454299 SSUH2Q9Y2M2 353 aa17.55■□□□□ 0.4
RAB28P2-201ENST00000454299 PITPNM1O00562 1244 aa17.5■□□□□ 0.39
RAB28P2-201ENST00000454299 PABPN1Q86U42 306 aaKnown RBP eCLIP17.43■□□□□ 0.38
RAB28P2-201ENST00000454299 CLEC11AQ9Y240 323 aa17.4■□□□□ 0.38
RAB28P2-201ENST00000454299 SPDYE4A6NLX3 237 aa17.38■□□□□ 0.37
RAB28P2-201ENST00000454299 SPDYE1Q8NFV5 336 aaPredicted RBP17.36■□□□□ 0.37
RAB28P2-201ENST00000454299 PIP4P2Q8N4L2 257 aa17.28■□□□□ 0.36
RAB28P2-201ENST00000454299 FXR2P51116 673 aaKnown RBP eCLIP17.2■□□□□ 0.34
RAB28P2-201ENST00000454299 PRR29P0C7W0 189 aa17.12■□□□□ 0.33
RAB28P2-201ENST00000454299 PRKAR2AP13861 404 aaKnown RBP17.07■□□□□ 0.32
RAB28P2-201ENST00000454299 CHADLQ6NUI6 762 aa17.01■□□□□ 0.31
RAB28P2-201ENST00000454299 FKBP8Q14318 412 aa17■□□□□ 0.31
RAB28P2-201ENST00000454299 STAG3Q9UJ98 1225 aa16.97■□□□□ 0.31
RAB28P2-201ENST00000454299 PROM2Q8N271 834 aa16.91■□□□□ 0.3
RAB28P2-201ENST00000454299 HAX1O00165 279 aa16.89■□□□□ 0.29
RAB28P2-201ENST00000454299 CREBZFQ9NS37 354 aa16.77■□□□□ 0.28
RAB28P2-201ENST00000454299 FARP1Q9Y4F1 1045 aaPredicted RBP16.73■□□□□ 0.27
RAB28P2-201ENST00000454299 EVX2Q03828 476 aa16.69■□□□□ 0.26
RAB28P2-201ENST00000454299 SP7Q8TDD2 431 aaPredicted RBP16.65■□□□□ 0.26
RAB28P2-201ENST00000454299 C19orf67A6NJJ6 358 aa16.63■□□□□ 0.25
RAB28P2-201ENST00000454299 CD44P16070 742 aaKnown RBP16.55■□□□□ 0.24
RAB28P2-201ENST00000454299 MIER1Q8N108 512 aa16.55■□□□□ 0.24
RAB28P2-201ENST00000454299 MNX1P50219 401 aaPredicted RBP16.5■□□□□ 0.23
RAB28P2-201ENST00000454299 PLCD3Q8N3E9 789 aa16.49■□□□□ 0.23
RAB28P2-201ENST00000454299 PLEKHG5O94827 1062 aa16.48■□□□□ 0.23
RAB28P2-201ENST00000454299 NPM1P06748 294 aaKnown RBP eCLIP16.47■□□□□ 0.23
RAB28P2-201ENST00000454299 FBXO3Q9UK99 471 aa16.44■□□□□ 0.22
RAB28P2-201ENST00000454299 ZRANB1Q9UGI0 708 aa16.41■□□□□ 0.22
RAB28P2-201ENST00000454299 PAK3O75914 559 aaPredicted RBP16.35■□□□□ 0.21
RAB28P2-201ENST00000454299 GABBR2O75899 941 aa16.32■□□□□ 0.2
RAB28P2-201ENST00000454299 VASPP50552 380 aaPredicted RBP16.27■□□□□ 0.2
RAB28P2-201ENST00000454299 TSPYL2Q9H2G4 693 aaPredicted RBP16.27■□□□□ 0.2
RAB28P2-201ENST00000454299 ZNF579Q8NAF0 562 aaKnown RBP16.26■□□□□ 0.19
RAB28P2-201ENST00000454299 ZBTB47Q9UFB7 747 aaPredicted RBP16.25■□□□□ 0.19
RAB28P2-201ENST00000454299 PHF12Q96QT6 1004 aa16.23■□□□□ 0.19
RAB28P2-201ENST00000454299 RASEFQ8IZ41 740 aa16.2■□□□□ 0.18
RAB28P2-201ENST00000454299 KLHL34Q8N239 644 aa16.17■□□□□ 0.18
RAB28P2-201ENST00000454299 NUBP1P53384 320 aa16.11■□□□□ 0.17
RAB28P2-201ENST00000454299 GALR2O43603 387 aaPredicted RBP16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 106.5 ms