RNA–Protein interactions for RNA: ENST00000613575.4

CDKAL1-204, Transcript of CDK5 regulatory subunit associated protein 1 like 1, humanhuman

TSL 1 (best) BASIC

Gene CDKAL1, Length 1,673 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1-204ENST00000613575 AEBP2Q6ZN18 517 aaPredicted RBP20.29■□□□□ 0.84
CDKAL1-204ENST00000613575 CHIC1Q5VXU3 224 aa19.02■□□□□ 0.64
CDKAL1-204ENST00000613575 SENP3Q9H4L4 574 aaPredicted RBP17.33■□□□□ 0.37
CDKAL1-204ENST00000613575 PHF23Q9BUL5 403 aaPredicted RBP17.03■□□□□ 0.32
CDKAL1-204ENST00000613575 POTEDQ86YR6 584 aa16.51■□□□□ 0.23
CDKAL1-204ENST00000613575 FOXD1Q16676 465 aa16.31■□□□□ 0.2
CDKAL1-204ENST00000613575 PLPPR3Q6T4P5 718 aa15.52■□□□□ 0.08
CDKAL1-204ENST00000613575 MSH5O43196 834 aa15.49■□□□□ 0.07
CDKAL1-204ENST00000613575 PIAS4Q8N2W9 510 aaPredicted RBP14.98□□□□□ -0.01
CDKAL1-204ENST00000613575 ADRA2BP18089 450 aa14.77□□□□□ -0.04
CDKAL1-204ENST00000613575 PPP6R1Q9UPN7 881 aa14.74□□□□□ -0.05
CDKAL1-204ENST00000613575 CACNB1Q02641 598 aaPredicted RBP13.75□□□□□ -0.21
CDKAL1-204ENST00000613575 PPP4R3CPQ6ZMV5 832 aa13.69□□□□□ -0.22
CDKAL1-204ENST00000613575 DMRT2Q9Y5R5 561 aa13.66□□□□□ -0.22
CDKAL1-204ENST00000613575 NISCHQ9Y2I1 1504 aa13.62□□□□□ -0.23
CDKAL1-204ENST00000613575 MAPK8IP2Q13387 824 aaPredicted RBP13.61□□□□□ -0.23
CDKAL1-204ENST00000613575 SCAF1Q9H7N4 1312 aaKnown RBP13.53□□□□□ -0.24
CDKAL1-204ENST00000613575 KCNA4P22459 653 aa13.5□□□□□ -0.25
CDKAL1-204ENST00000613575 NCBP3Q53F19 620 aaKnown RBP13.39□□□□□ -0.27
CDKAL1-204ENST00000613575 CNKSR2Q8WXI2 1034 aa13.28□□□□□ -0.28
CDKAL1-204ENST00000613575 RNF39Q9H2S5 420 aa13.2□□□□□ -0.3
CDKAL1-204ENST00000613575 NPM3O75607 178 aaKnown RBP13.15□□□□□ -0.3
CDKAL1-204ENST00000613575 DCAF8L1A6NGE4 600 aa13.02□□□□□ -0.32
CDKAL1-204ENST00000613575 RNF216Q9NWF9 866 aaPredicted RBP12.98□□□□□ -0.33
CDKAL1-204ENST00000613575 C1QBPQ07021 282 aaKnown RBP12.92□□□□□ -0.34
CDKAL1-204ENST00000613575 SLC4A1APQ9BWU0 796 aaKnown RBP12.89□□□□□ -0.35
CDKAL1-204ENST00000613575 HOXD11P31277 338 aaPredicted RBP12.87□□□□□ -0.35
CDKAL1-204ENST00000613575 POTEHQ6S545 545 aa12.75□□□□□ -0.37
CDKAL1-204ENST00000613575 EHMT2Q96KQ7 1210 aa12.68□□□□□ -0.38
CDKAL1-204ENST00000613575 DNAJC5BQ9UF47 199 aa12.66□□□□□ -0.38
CDKAL1-204ENST00000613575 CSRNP3Q8WYN3 585 aa12.42□□□□□ -0.42
CDKAL1-204ENST00000613575 ZBTB22O15209 634 aa12.38□□□□□ -0.43
CDKAL1-204ENST00000613575 FOXD4L1Q9NU39 408 aa12.38□□□□□ -0.43
CDKAL1-204ENST00000613575 SLC4A2P04920 1241 aa12.38□□□□□ -0.43
CDKAL1-204ENST00000613575 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.36□□□□□ -0.433e-8■□□□□ 9.5
CDKAL1-204ENST00000613575 MYCNP04198 464 aaPredicted RBP12.17□□□□□ -0.46
CDKAL1-204ENST00000613575 U3KPZ7 1027 aaPredicted RBP12.11□□□□□ -0.47
CDKAL1-204ENST00000613575 DSG3P32926 999 aa12.1□□□□□ -0.47
CDKAL1-204ENST00000613575 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.02□□□□□ -0.49
CDKAL1-204ENST00000613575 HNRNPUL2Q1KMD3 747 aaKnown RBP12.02□□□□□ -0.49
CDKAL1-204ENST00000613575 SAMD1Q6SPF0 538 aaPredicted RBP11.98□□□□□ -0.49
CDKAL1-204ENST00000613575 PELP1Q8IZL8 1130 aaKnown RBP11.96□□□□□ -0.5
CDKAL1-204ENST00000613575 SPINK5Q9NQ38 1064 aaPredicted RBP11.96□□□□□ -0.5
CDKAL1-204ENST00000613575 ATXN8OSP0DMR3 200 aa11.92□□□□□ -0.5
CDKAL1-204ENST00000613575 MYT1Q01538 1121 aa11.91□□□□□ -0.5
CDKAL1-204ENST00000613575 CAPN15O75808 1086 aa11.9□□□□□ -0.5
CDKAL1-204ENST00000613575 APLP2Q06481 763 aa11.89□□□□□ -0.51
CDKAL1-204ENST00000613575 ATF5Q9Y2D1 282 aaPredicted RBP11.83□□□□□ -0.52
CDKAL1-204ENST00000613575 TRHP20396 242 aaPredicted RBP11.73□□□□□ -0.53
CDKAL1-204ENST00000613575 ZNF219Q9P2Y4 722 aaPredicted RBP11.69□□□□□ -0.54
CDKAL1-204ENST00000613575 ABCB7O75027 752 aa11.59□□□□□ -0.55
CDKAL1-204ENST00000613575 CCDC180Q9P1Z9 1646 aa11.59□□□□□ -0.55
CDKAL1-204ENST00000613575 CHRDL2Q6WN34 429 aa11.59□□□□□ -0.55
CDKAL1-204ENST00000613575 SP7Q8TDD2 431 aaPredicted RBP11.59□□□□□ -0.55
CDKAL1-204ENST00000613575 POLA2Q14181 598 aa11.54□□□□□ -0.56
CDKAL1-204ENST00000613575 TTBK1Q5TCY1 1321 aaPredicted RBP11.53□□□□□ -0.56
CDKAL1-204ENST00000613575 DNAJC5Q9H3Z4 198 aa11.52□□□□□ -0.56
CDKAL1-204ENST00000613575 ZCCHC6Q5VYS8 1495 aaKnown RBP11.49□□□□□ -0.57
CDKAL1-204ENST00000613575 RBM42Q9BTD8 480 aaKnown RBP11.48□□□□□ -0.57
CDKAL1-204ENST00000613575 FBLN2P98095 1184 aa11.37□□□□□ -0.59
CDKAL1-204ENST00000613575 ZBTB12Q9Y330 459 aaPredicted RBP11.34□□□□□ -0.59
CDKAL1-204ENST00000613575 SHROOM4Q9ULL8 1493 aa11.31□□□□□ -0.6
CDKAL1-204ENST00000613575 MKRN4PQ13434 485 aaPredicted RBP11.3□□□□□ -0.6
CDKAL1-204ENST00000613575 DCAF1Q9Y4B6 1507 aa11.3□□□□□ -0.6
CDKAL1-204ENST00000613575 FKBP8Q14318 412 aa11.27□□□□□ -0.6
CDKAL1-204ENST00000613575 PIP4P2Q8N4L2 257 aa11.17□□□□□ -0.62
CDKAL1-204ENST00000613575 DCAF8L2P0C7V8 631 aa11.15□□□□□ -0.62
CDKAL1-204ENST00000613575 SPDYE4A6NLX3 237 aa11.14□□□□□ -0.63
CDKAL1-204ENST00000613575 OSCARQ8IYS5 282 aa11.13□□□□□ -0.63
CDKAL1-204ENST00000613575 SUPT5HO00267 1087 aaKnown RBP11.12□□□□□ -0.63
CDKAL1-204ENST00000613575 HAX1O00165 279 aa11.11□□□□□ -0.63
CDKAL1-204ENST00000613575 AKT1S1Q96B36 256 aa11.09□□□□□ -0.63
CDKAL1-204ENST00000613575 MYO15BQ96JP2 1530 aa11.05□□□□□ -0.64
CDKAL1-204ENST00000613575 ZNF692Q9BU19 519 aaPredicted RBP11.04□□□□□ -0.64
CDKAL1-204ENST00000613575 SPDYE2BA6NHP3 402 aa11.03□□□□□ -0.64
CDKAL1-204ENST00000613575 SPDYE6P0CI01 402 aa11.03□□□□□ -0.64
CDKAL1-204ENST00000613575 EVX2Q03828 476 aa11.03□□□□□ -0.64
CDKAL1-204ENST00000613575 SPDYE2Q495Y8 402 aa11.03□□□□□ -0.64
CDKAL1-204ENST00000613575 REM2Q8IYK8 340 aaPredicted RBP11.01□□□□□ -0.65
CDKAL1-204ENST00000613575 FXR2P51116 673 aaKnown RBP eCLIP10.99□□□□□ -0.65
CDKAL1-204ENST00000613575 SLC24A1O60721 1099 aa10.98□□□□□ -0.65
CDKAL1-204ENST00000613575 ERICH6Q7L0X2 663 aa10.96□□□□□ -0.65
CDKAL1-204ENST00000613575 SSUH2Q9Y2M2 353 aa10.92□□□□□ -0.66
CDKAL1-204ENST00000613575 PITPNM1O00562 1244 aa10.91□□□□□ -0.66
CDKAL1-204ENST00000613575 PRKCSHP14314 528 aaPredicted RBP10.89□□□□□ -0.67
CDKAL1-204ENST00000613575 PABPN1Q86U42 306 aaKnown RBP eCLIP10.89□□□□□ -0.67
CDKAL1-204ENST00000613575 PROM2Q8N271 834 aa10.89□□□□□ -0.67
CDKAL1-204ENST00000613575 ABCC9O60706 1549 aa10.88□□□□□ -0.67
CDKAL1-204ENST00000613575 LHX8Q68G74 356 aa10.85□□□□□ -0.67
CDKAL1-204ENST00000613575 FBXO3Q9UK99 471 aa10.83□□□□□ -0.68
CDKAL1-204ENST00000613575 NACADO15069 1562 aa10.8□□□□□ -0.68
CDKAL1-204ENST00000613575 PLSCR2Q9NRY7 297 aa10.75□□□□□ -0.69
CDKAL1-204ENST00000613575 RSF1Q96T23 1441 aaPredicted RBP10.75□□□□□ -0.69
CDKAL1-204ENST00000613575 STAG3Q9UJ98 1225 aa10.73□□□□□ -0.69
CDKAL1-204ENST00000613575 SPDYE1Q8NFV5 336 aaPredicted RBP10.7□□□□□ -0.7
CDKAL1-204ENST00000613575 CLEC11AQ9Y240 323 aa10.7□□□□□ -0.7
CDKAL1-204ENST00000613575 SCRIBQ14160 1630 aa10.7□□□□□ -0.7
CDKAL1-204ENST00000613575 GABBR2O75899 941 aa10.68□□□□□ -0.7
CDKAL1-204ENST00000613575 C19orf67A6NJJ6 358 aa10.66□□□□□ -0.7
CDKAL1-204ENST00000613575 VASPP50552 380 aaPredicted RBP10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms