RNA–Protein interactions for RNA: ENST00000414095.1

NPM1P4-201, Transcript of nucleophosmin 1 pseudogene 4, humanhuman

BASIC

Gene NPM1P4, Length 812 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1P4-201ENST00000414095 AEBP2Q6ZN18 517 aaPredicted RBP25.05■■□□□ 1.6
NPM1P4-201ENST00000414095 CHIC1Q5VXU3 224 aa23.8■■□□□ 1.4
NPM1P4-201ENST00000414095 SENP3Q9H4L4 574 aaPredicted RBP21.29■■□□□ 1
NPM1P4-201ENST00000414095 PHF23Q9BUL5 403 aaPredicted RBP21.09■□□□□ 0.97
NPM1P4-201ENST00000414095 FOXD1Q16676 465 aa19.9■□□□□ 0.78
NPM1P4-201ENST00000414095 PLPPR3Q6T4P5 718 aa19.03■□□□□ 0.64
NPM1P4-201ENST00000414095 PPP6R1Q9UPN7 881 aa18.68■□□□□ 0.58
NPM1P4-201ENST00000414095 ADRA2BP18089 450 aa18.64■□□□□ 0.57
NPM1P4-201ENST00000414095 PIAS4Q8N2W9 510 aaPredicted RBP18.61■□□□□ 0.57
NPM1P4-201ENST00000414095 MSH5O43196 834 aa18.53■□□□□ 0.56
NPM1P4-201ENST00000414095 POTEDQ86YR6 584 aa18.06■□□□□ 0.48
NPM1P4-201ENST00000414095 MAPK8IP2Q13387 824 aaPredicted RBP17.13■□□□□ 0.33
NPM1P4-201ENST00000414095 SCAF1Q9H7N4 1312 aaKnown RBP16.97■□□□□ 0.31
NPM1P4-201ENST00000414095 DMRT2Q9Y5R5 561 aa16.9■□□□□ 0.3
NPM1P4-201ENST00000414095 PPP4R3CPQ6ZMV5 832 aa16.73■□□□□ 0.27
NPM1P4-201ENST00000414095 CNKSR2Q8WXI2 1034 aa16.36■□□□□ 0.21
NPM1P4-201ENST00000414095 DCAF8L1A6NGE4 600 aa16.31■□□□□ 0.2
NPM1P4-201ENST00000414095 HOXD11P31277 338 aaPredicted RBP16.29■□□□□ 0.2
NPM1P4-201ENST00000414095 RNF216Q9NWF9 866 aaPredicted RBP16.19■□□□□ 0.18
NPM1P4-201ENST00000414095 NCBP3Q53F19 620 aaKnown RBP16.06■□□□□ 0.16
NPM1P4-201ENST00000414095 CACNB1Q02641 598 aaPredicted RBP15.94■□□□□ 0.14
NPM1P4-201ENST00000414095 NPM3O75607 178 aaKnown RBP15.86■□□□□ 0.13
NPM1P4-201ENST00000414095 RNF39Q9H2S5 420 aa15.84■□□□□ 0.13
NPM1P4-201ENST00000414095 KCNA4P22459 653 aa15.64■□□□□ 0.09
NPM1P4-201ENST00000414095 DNAJC5BQ9UF47 199 aa15.64■□□□□ 0.09
NPM1P4-201ENST00000414095 C1QBPQ07021 282 aaKnown RBP15.59■□□□□ 0.09
NPM1P4-201ENST00000414095 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.59■□□□□ 0.09
NPM1P4-201ENST00000414095 U3KPZ7 1027 aaPredicted RBP15.24■□□□□ 0.03
NPM1P4-201ENST00000414095 SLC4A2P04920 1241 aa15.14■□□□□ 0.01
NPM1P4-201ENST00000414095 SPINK5Q9NQ38 1064 aaPredicted RBP15.05■□□□□ -0
NPM1P4-201ENST00000414095 CAPN15O75808 1086 aa15.02■□□□□ -0
NPM1P4-201ENST00000414095 DSG3P32926 999 aa14.88□□□□□ -0.03
NPM1P4-201ENST00000414095 TRHP20396 242 aaPredicted RBP14.81□□□□□ -0.04
NPM1P4-201ENST00000414095 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.77□□□□□ -0.05
NPM1P4-201ENST00000414095 HNRNPUL2Q1KMD3 747 aaKnown RBP14.77□□□□□ -0.05
NPM1P4-201ENST00000414095 APLP2Q06481 763 aa14.75□□□□□ -0.05
NPM1P4-201ENST00000414095 SLC4A1APQ9BWU0 796 aaKnown RBP14.75□□□□□ -0.05
NPM1P4-201ENST00000414095 ABCB7O75027 752 aa14.7□□□□□ -0.06
NPM1P4-201ENST00000414095 SAMD1Q6SPF0 538 aaPredicted RBP14.7□□□□□ -0.06
NPM1P4-201ENST00000414095 ZNF219Q9P2Y4 722 aaPredicted RBP14.69□□□□□ -0.06
NPM1P4-201ENST00000414095 MYCNP04198 464 aaPredicted RBP14.63□□□□□ -0.07
NPM1P4-201ENST00000414095 FOXD4L1Q9NU39 408 aa14.53□□□□□ -0.08
NPM1P4-201ENST00000414095 POLA2Q14181 598 aa14.4□□□□□ -0.1
NPM1P4-201ENST00000414095 ATF5Q9Y2D1 282 aaPredicted RBP14.38□□□□□ -0.11
NPM1P4-201ENST00000414095 ZBTB22O15209 634 aa14.37□□□□□ -0.11
NPM1P4-201ENST00000414095 POTEHQ6S545 545 aa14.16□□□□□ -0.14
NPM1P4-201ENST00000414095 RBM42Q9BTD8 480 aaKnown RBP14.14□□□□□ -0.15
NPM1P4-201ENST00000414095 NISCHQ9Y2I1 1504 aa14.13□□□□□ -0.15
NPM1P4-201ENST00000414095 ATXN8OSP0DMR3 200 aa14.03□□□□□ -0.16
NPM1P4-201ENST00000414095 ZBTB12Q9Y330 459 aaPredicted RBP14.01□□□□□ -0.17
NPM1P4-201ENST00000414095 OSCARQ8IYS5 282 aa13.92□□□□□ -0.18
NPM1P4-201ENST00000414095 CHRDL2Q6WN34 429 aa13.86□□□□□ -0.19
NPM1P4-201ENST00000414095 AKT1S1Q96B36 256 aa13.85□□□□□ -0.19
NPM1P4-201ENST00000414095 REM2Q8IYK8 340 aaPredicted RBP13.76□□□□□ -0.21
NPM1P4-201ENST00000414095 CSRNP3Q8WYN3 585 aa13.76□□□□□ -0.21
NPM1P4-201ENST00000414095 FBLN2P98095 1184 aa13.75□□□□□ -0.21
NPM1P4-201ENST00000414095 MKRN4PQ13434 485 aaPredicted RBP13.68□□□□□ -0.22
NPM1P4-201ENST00000414095 EHMT2Q96KQ7 1210 aa13.66□□□□□ -0.22
NPM1P4-201ENST00000414095 SPDYE2BA6NHP3 402 aa13.61□□□□□ -0.23
NPM1P4-201ENST00000414095 PITPNM1O00562 1244 aa13.61□□□□□ -0.23
NPM1P4-201ENST00000414095 SPDYE6P0CI01 402 aa13.61□□□□□ -0.23
NPM1P4-201ENST00000414095 SPDYE2Q495Y8 402 aa13.61□□□□□ -0.23
NPM1P4-201ENST00000414095 PIP4P2Q8N4L2 257 aa13.55□□□□□ -0.24
NPM1P4-201ENST00000414095 ZNF692Q9BU19 519 aaPredicted RBP13.52□□□□□ -0.25
NPM1P4-201ENST00000414095 FXR2P51116 673 aaKnown RBP eCLIP13.46□□□□□ -0.25
NPM1P4-201ENST00000414095 CLEC11AQ9Y240 323 aa13.43□□□□□ -0.26
NPM1P4-201ENST00000414095 SSUH2Q9Y2M2 353 aa13.43□□□□□ -0.26
NPM1P4-201ENST00000414095 SPDYE1Q8NFV5 336 aaPredicted RBP13.38□□□□□ -0.27
NPM1P4-201ENST00000414095 HAX1O00165 279 aa13.33□□□□□ -0.28
NPM1P4-201ENST00000414095 PABPN1Q86U42 306 aaKnown RBP eCLIP13.32□□□□□ -0.28
NPM1P4-201ENST00000414095 SP7Q8TDD2 431 aaPredicted RBP13.29□□□□□ -0.28
NPM1P4-201ENST00000414095 PRKAR2AP13861 404 aaKnown RBP13.28□□□□□ -0.28
NPM1P4-201ENST00000414095 PRR29P0C7W0 189 aa13.19□□□□□ -0.3
NPM1P4-201ENST00000414095 EVX2Q03828 476 aa13.19□□□□□ -0.3
NPM1P4-201ENST00000414095 CHADLQ6NUI6 762 aa13.18□□□□□ -0.3
NPM1P4-201ENST00000414095 SPDYE4A6NLX3 237 aa13.06□□□□□ -0.32
NPM1P4-201ENST00000414095 C19orf67A6NJJ6 358 aa13.03□□□□□ -0.32
NPM1P4-201ENST00000414095 ABCC9O60706 1549 aa12.97□□□□□ -0.33
NPM1P4-201ENST00000414095 FARP1Q9Y4F1 1045 aaPredicted RBP12.94□□□□□ -0.34
NPM1P4-201ENST00000414095 STAG3Q9UJ98 1225 aa12.91□□□□□ -0.34
NPM1P4-201ENST00000414095 GABBR2O75899 941 aa12.86□□□□□ -0.35
NPM1P4-201ENST00000414095 CREBZFQ9NS37 354 aa12.86□□□□□ -0.35
NPM1P4-201ENST00000414095 CD44P16070 742 aaKnown RBP12.85□□□□□ -0.35
NPM1P4-201ENST00000414095 CCDC180Q9P1Z9 1646 aa12.8□□□□□ -0.36
NPM1P4-201ENST00000414095 ZRANB1Q9UGI0 708 aa12.7□□□□□ -0.38
NPM1P4-201ENST00000414095 PROM2Q8N271 834 aa12.68□□□□□ -0.38
NPM1P4-201ENST00000414095 MNX1P50219 401 aaPredicted RBP12.63□□□□□ -0.39
NPM1P4-201ENST00000414095 NPM1P06748 294 aaKnown RBP eCLIP12.6□□□□□ -0.39
NPM1P4-201ENST00000414095 ZNF579Q8NAF0 562 aaKnown RBP12.6□□□□□ -0.39
NPM1P4-201ENST00000414095 POTEIP0CG38 1075 aa12.59□□□□□ -0.39
NPM1P4-201ENST00000414095 PAK3O75914 559 aaPredicted RBP12.56□□□□□ -0.4
NPM1P4-201ENST00000414095 CLCN6P51797 869 aa12.56□□□□□ -0.4
NPM1P4-201ENST00000414095 PHF12Q96QT6 1004 aa12.53□□□□□ -0.4
NPM1P4-201ENST00000414095 DCBLD2Q96PD2 775 aa12.52□□□□□ -0.41
NPM1P4-201ENST00000414095 GALR2O43603 387 aaPredicted RBP12.51□□□□□ -0.41
NPM1P4-201ENST00000414095 FKBP8Q14318 412 aa12.5□□□□□ -0.41
NPM1P4-201ENST00000414095 MIER1Q8N108 512 aa12.5□□□□□ -0.41
NPM1P4-201ENST00000414095 LHX8Q68G74 356 aa12.49□□□□□ -0.41
NPM1P4-201ENST00000414095 TSPYL2Q9H2G4 693 aaPredicted RBP12.45□□□□□ -0.42
NPM1P4-201ENST00000414095 PLEKHG5O94827 1062 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 128.9 ms