RNA–Protein interactions for RNA: ENST00000415579.2

PTCD2P2-201, Transcript of pentatricopeptide repeat domain 2 pseudogene 2, humanhuman

BASIC

Gene PTCD2P2, Length 1,095 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2P2-201ENST00000415579 AEBP2Q6ZN18 517 aaPredicted RBP31.77■■■□□ 2.68
PTCD2P2-201ENST00000415579 CHIC1Q5VXU3 224 aa30.23■■■□□ 2.43
PTCD2P2-201ENST00000415579 SENP3Q9H4L4 574 aaPredicted RBP26.91■■□□□ 1.9
PTCD2P2-201ENST00000415579 PHF23Q9BUL5 403 aaPredicted RBP26.7■■□□□ 1.86
PTCD2P2-201ENST00000415579 FOXD1Q16676 465 aa25.19■■□□□ 1.62
PTCD2P2-201ENST00000415579 PLPPR3Q6T4P5 718 aa24.18■■□□□ 1.46
PTCD2P2-201ENST00000415579 PPP6R1Q9UPN7 881 aa23.76■■□□□ 1.39
PTCD2P2-201ENST00000415579 ADRA2BP18089 450 aa23.7■■□□□ 1.38
PTCD2P2-201ENST00000415579 PIAS4Q8N2W9 510 aaPredicted RBP23.56■■□□□ 1.36
PTCD2P2-201ENST00000415579 MSH5O43196 834 aa23.36■■□□□ 1.33
PTCD2P2-201ENST00000415579 POTEDQ86YR6 584 aa22.65■■□□□ 1.22
PTCD2P2-201ENST00000415579 MAPK8IP2Q13387 824 aaPredicted RBP21.75■■□□□ 1.07
PTCD2P2-201ENST00000415579 SCAF1Q9H7N4 1312 aaKnown RBP21.46■■□□□ 1.03
PTCD2P2-201ENST00000415579 DMRT2Q9Y5R5 561 aa21.4■■□□□ 1.02
PTCD2P2-201ENST00000415579 PPP4R3CPQ6ZMV5 832 aa21.3■■□□□ 1
PTCD2P2-201ENST00000415579 CNKSR2Q8WXI2 1034 aa20.79■□□□□ 0.92
PTCD2P2-201ENST00000415579 HOXD11P31277 338 aaPredicted RBP20.65■□□□□ 0.9
PTCD2P2-201ENST00000415579 DCAF8L1A6NGE4 600 aa20.64■□□□□ 0.89
PTCD2P2-201ENST00000415579 RNF216Q9NWF9 866 aaPredicted RBP20.54■□□□□ 0.88
PTCD2P2-201ENST00000415579 NCBP3Q53F19 620 aaKnown RBP20.42■□□□□ 0.86
PTCD2P2-201ENST00000415579 NPM3O75607 178 aaKnown RBP20.25■□□□□ 0.83
PTCD2P2-201ENST00000415579 KCNA4P22459 653 aa20.07■□□□□ 0.8
PTCD2P2-201ENST00000415579 CACNB1Q02641 598 aaPredicted RBP20.05■□□□□ 0.8
PTCD2P2-201ENST00000415579 RNF39Q9H2S5 420 aa20.01■□□□□ 0.79
PTCD2P2-201ENST00000415579 DNAJC5BQ9UF47 199 aa19.76■□□□□ 0.75
PTCD2P2-201ENST00000415579 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.75■□□□□ 0.75
PTCD2P2-201ENST00000415579 C1QBPQ07021 282 aaKnown RBP19.67■□□□□ 0.74
PTCD2P2-201ENST00000415579 U3KPZ7 1027 aaPredicted RBP19.37■□□□□ 0.69
PTCD2P2-201ENST00000415579 SLC4A2P04920 1241 aa19.32■□□□□ 0.68
PTCD2P2-201ENST00000415579 SPINK5Q9NQ38 1064 aaPredicted RBP19.11■□□□□ 0.65
PTCD2P2-201ENST00000415579 CAPN15O75808 1086 aa19.02■□□□□ 0.64
PTCD2P2-201ENST00000415579 SLC4A1APQ9BWU0 796 aaKnown RBP18.91■□□□□ 0.62
PTCD2P2-201ENST00000415579 DSG3P32926 999 aa18.83■□□□□ 0.6
PTCD2P2-201ENST00000415579 TRHP20396 242 aaPredicted RBP18.79■□□□□ 0.6
PTCD2P2-201ENST00000415579 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.71■□□□□ 0.59
PTCD2P2-201ENST00000415579 HNRNPUL2Q1KMD3 747 aaKnown RBP18.71■□□□□ 0.59
PTCD2P2-201ENST00000415579 ABCB7O75027 752 aa18.66■□□□□ 0.58
PTCD2P2-201ENST00000415579 SAMD1Q6SPF0 538 aaPredicted RBP18.66■□□□□ 0.58
PTCD2P2-201ENST00000415579 MYCNP04198 464 aaPredicted RBP18.64■□□□□ 0.57
PTCD2P2-201ENST00000415579 APLP2Q06481 763 aa18.63■□□□□ 0.57
PTCD2P2-201ENST00000415579 ZNF219Q9P2Y4 722 aaPredicted RBP18.59■□□□□ 0.57
PTCD2P2-201ENST00000415579 FOXD4L1Q9NU39 408 aa18.56■□□□□ 0.56
PTCD2P2-201ENST00000415579 ZBTB22O15209 634 aa18.48■□□□□ 0.55
PTCD2P2-201ENST00000415579 ATF5Q9Y2D1 282 aaPredicted RBP18.38■□□□□ 0.53
PTCD2P2-201ENST00000415579 POLA2Q14181 598 aa18.29■□□□□ 0.52
PTCD2P2-201ENST00000415579 ATXN8OSP0DMR3 200 aa17.88■□□□□ 0.45
PTCD2P2-201ENST00000415579 RBM42Q9BTD8 480 aaKnown RBP17.83■□□□□ 0.44
PTCD2P2-201ENST00000415579 POTEHQ6S545 545 aa17.76■□□□□ 0.43
PTCD2P2-201ENST00000415579 CSRNP3Q8WYN3 585 aa17.75■□□□□ 0.43
PTCD2P2-201ENST00000415579 ZBTB12Q9Y330 459 aaPredicted RBP17.75■□□□□ 0.43
PTCD2P2-201ENST00000415579 OSCARQ8IYS5 282 aa17.7■□□□□ 0.42
PTCD2P2-201ENST00000415579 EHMT2Q96KQ7 1210 aa17.68■□□□□ 0.42
PTCD2P2-201ENST00000415579 AKT1S1Q96B36 256 aa17.51■□□□□ 0.39
PTCD2P2-201ENST00000415579 MKRN4PQ13434 485 aaPredicted RBP17.49■□□□□ 0.39
PTCD2P2-201ENST00000415579 CHRDL2Q6WN34 429 aa17.49■□□□□ 0.39
PTCD2P2-201ENST00000415579 FBLN2P98095 1184 aa17.47■□□□□ 0.39
PTCD2P2-201ENST00000415579 REM2Q8IYK8 340 aaPredicted RBP17.43■□□□□ 0.38
PTCD2P2-201ENST00000415579 SPDYE2BA6NHP3 402 aa17.27■□□□□ 0.36
PTCD2P2-201ENST00000415579 SPDYE6P0CI01 402 aa17.27■□□□□ 0.36
PTCD2P2-201ENST00000415579 SPDYE2Q495Y8 402 aa17.27■□□□□ 0.36
PTCD2P2-201ENST00000415579 PITPNM1O00562 1244 aa17.26■□□□□ 0.35
PTCD2P2-201ENST00000415579 ZNF692Q9BU19 519 aaPredicted RBP17.19■□□□□ 0.34
PTCD2P2-201ENST00000415579 PIP4P2Q8N4L2 257 aa17.15■□□□□ 0.34
PTCD2P2-201ENST00000415579 SSUH2Q9Y2M2 353 aa17.09■□□□□ 0.33
PTCD2P2-201ENST00000415579 CLEC11AQ9Y240 323 aa17.05■□□□□ 0.32
PTCD2P2-201ENST00000415579 FXR2P51116 673 aaKnown RBP eCLIP17.02■□□□□ 0.32
PTCD2P2-201ENST00000415579 PABPN1Q86U42 306 aaKnown RBP eCLIP16.96■□□□□ 0.31
PTCD2P2-201ENST00000415579 SPDYE1Q8NFV5 336 aaPredicted RBP16.95■□□□□ 0.3
PTCD2P2-201ENST00000415579 PRKAR2AP13861 404 aaKnown RBP16.81■□□□□ 0.28
PTCD2P2-201ENST00000415579 HAX1O00165 279 aa16.8■□□□□ 0.28
PTCD2P2-201ENST00000415579 CHADLQ6NUI6 762 aa16.74■□□□□ 0.27
PTCD2P2-201ENST00000415579 PRR29P0C7W0 189 aa16.72■□□□□ 0.27
PTCD2P2-201ENST00000415579 SPDYE4A6NLX3 237 aa16.7■□□□□ 0.26
PTCD2P2-201ENST00000415579 EVX2Q03828 476 aa16.7■□□□□ 0.26
PTCD2P2-201ENST00000415579 SP7Q8TDD2 431 aaPredicted RBP16.7■□□□□ 0.26
PTCD2P2-201ENST00000415579 C19orf67A6NJJ6 358 aa16.47■□□□□ 0.23
PTCD2P2-201ENST00000415579 FARP1Q9Y4F1 1045 aaPredicted RBP16.41■□□□□ 0.22
PTCD2P2-201ENST00000415579 STAG3Q9UJ98 1225 aa16.39■□□□□ 0.21
PTCD2P2-201ENST00000415579 CREBZFQ9NS37 354 aa16.37■□□□□ 0.21
PTCD2P2-201ENST00000415579 CD44P16070 742 aaKnown RBP16.27■□□□□ 0.2
PTCD2P2-201ENST00000415579 PROM2Q8N271 834 aa16.24■□□□□ 0.19
PTCD2P2-201ENST00000415579 GABBR2O75899 941 aa16.23■□□□□ 0.19
PTCD2P2-201ENST00000415579 MNX1P50219 401 aaPredicted RBP16.11■□□□□ 0.17
PTCD2P2-201ENST00000415579 ZRANB1Q9UGI0 708 aa16.1■□□□□ 0.17
PTCD2P2-201ENST00000415579 FKBP8Q14318 412 aa16.09■□□□□ 0.17
PTCD2P2-201ENST00000415579 NPM1P06748 294 aaKnown RBP eCLIP15.97■□□□□ 0.15
PTCD2P2-201ENST00000415579 ZNF579Q8NAF0 562 aaKnown RBP15.96■□□□□ 0.15
PTCD2P2-201ENST00000415579 POTEIP0CG38 1075 aa15.94■□□□□ 0.14
PTCD2P2-201ENST00000415579 MIER1Q8N108 512 aa15.94■□□□□ 0.14
PTCD2P2-201ENST00000415579 PHF12Q96QT6 1004 aa15.93■□□□□ 0.14
PTCD2P2-201ENST00000415579 PAK3O75914 559 aaPredicted RBP15.89■□□□□ 0.13
PTCD2P2-201ENST00000415579 GALR2O43603 387 aaPredicted RBP15.88■□□□□ 0.13
PTCD2P2-201ENST00000415579 TSPYL2Q9H2G4 693 aaPredicted RBP15.85■□□□□ 0.13
PTCD2P2-201ENST00000415579 CLCN6P51797 869 aa15.81■□□□□ 0.12
PTCD2P2-201ENST00000415579 PLCD3Q8N3E9 789 aa15.81■□□□□ 0.12
PTCD2P2-201ENST00000415579 DCBLD2Q96PD2 775 aa15.8■□□□□ 0.12
PTCD2P2-201ENST00000415579 PLEKHG5O94827 1062 aa15.78■□□□□ 0.12
PTCD2P2-201ENST00000415579 RASEFQ8IZ41 740 aa15.72■□□□□ 0.11
PTCD2P2-201ENST00000415579 LHX8Q68G74 356 aa15.71■□□□□ 0.11
PTCD2P2-201ENST00000415579 MS4A3Q96HJ5 214 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 114.6 ms