RNA–Protein interactions for RNA: ENST00000614289.1

AC004852.2-201, humanhuman

TSL 1 (best) BASIC

Gene AC004852.2, Length 2,218 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004852.2-201ENST00000614289 POTEDQ86YR6 584 aa17.21■□□□□ 0.35
AC004852.2-201ENST00000614289 AEBP2Q6ZN18 517 aaPredicted RBP16.89■□□□□ 0.29
AC004852.2-201ENST00000614289 CHIC1Q5VXU3 224 aa15.91■□□□□ 0.14
AC004852.2-201ENST00000614289 SENP3Q9H4L4 574 aaPredicted RBP14.85□□□□□ -0.03
AC004852.2-201ENST00000614289 PHF23Q9BUL5 403 aaPredicted RBP14.26□□□□□ -0.13
AC004852.2-201ENST00000614289 MSH5O43196 834 aa14.15□□□□□ -0.14
AC004852.2-201ENST00000614289 FOXD1Q16676 465 aa13.8□□□□□ -0.2
AC004852.2-201ENST00000614289 NISCHQ9Y2I1 1504 aa13.71□□□□□ -0.22
AC004852.2-201ENST00000614289 CACNB1Q02641 598 aaPredicted RBP13.31□□□□□ -0.28
AC004852.2-201ENST00000614289 POTEHQ6S545 545 aa13.12□□□□□ -0.31
AC004852.2-201ENST00000614289 PLPPR3Q6T4P5 718 aa12.85□□□□□ -0.35
AC004852.2-201ENST00000614289 PIAS4Q8N2W9 510 aaPredicted RBP12.56□□□□□ -0.4
AC004852.2-201ENST00000614289 PPP6R1Q9UPN7 881 aa12.46□□□□□ -0.41
AC004852.2-201ENST00000614289 ADRA2BP18089 450 aa12.42□□□□□ -0.42
AC004852.2-201ENST00000614289 CCDC180Q9P1Z9 1646 aa11.91□□□□□ -0.5
AC004852.2-201ENST00000614289 SLC24A1O60721 1099 aa11.78□□□□□ -0.52
AC004852.2-201ENST00000614289 PLSCR2Q9NRY7 297 aa11.68□□□□□ -0.54
AC004852.2-201ENST00000614289 RNF39Q9H2S5 420 aa11.64□□□□□ -0.55
AC004852.2-201ENST00000614289 C1QBPQ07021 282 aaKnown RBP11.55□□□□□ -0.56
AC004852.2-201ENST00000614289 KCNA4P22459 653 aa11.53□□□□□ -0.56
AC004852.2-201ENST00000614289 ZCCHC6Q5VYS8 1495 aaKnown RBP11.51□□□□□ -0.57
AC004852.2-201ENST00000614289 MAPK8IP2Q13387 824 aaPredicted RBP11.45□□□□□ -0.58
AC004852.2-201ENST00000614289 DMRT2Q9Y5R5 561 aa11.45□□□□□ -0.58
AC004852.2-201ENST00000614289 PPP4R3CPQ6ZMV5 832 aa11.44□□□□□ -0.58
AC004852.2-201ENST00000614289 SCAF1Q9H7N4 1312 aaKnown RBP11.43□□□□□ -0.58
AC004852.2-201ENST00000614289 DCAF8L2P0C7V8 631 aa11.36□□□□□ -0.59
AC004852.2-201ENST00000614289 EHMT2Q96KQ7 1210 aa11.32□□□□□ -0.6
AC004852.2-201ENST00000614289 DCAF1Q9Y4B6 1507 aa11.32□□□□□ -0.6
AC004852.2-201ENST00000614289 SP7Q8TDD2 431 aaPredicted RBP11.31□□□□□ -0.6
AC004852.2-201ENST00000614289 ABCC9O60706 1549 aa11.29□□□□□ -0.6
AC004852.2-201ENST00000614289 SHROOM4Q9ULL8 1493 aa11.23□□□□□ -0.61
AC004852.2-201ENST00000614289 MYO15BQ96JP2 1530 aa11.17□□□□□ -0.62
AC004852.2-201ENST00000614289 NACADO15069 1562 aa11.11□□□□□ -0.63
AC004852.2-201ENST00000614289 NPM3O75607 178 aaKnown RBP11.09□□□□□ -0.63
AC004852.2-201ENST00000614289 NCBP3Q53F19 620 aaKnown RBP11.01□□□□□ -0.65
AC004852.2-201ENST00000614289 RB1CC1Q8TDY2 1594 aa11□□□□□ -0.65
AC004852.2-201ENST00000614289 SCRIBQ14160 1630 aa10.99□□□□□ -0.65
AC004852.2-201ENST00000614289 CNKSR2Q8WXI2 1034 aa10.99□□□□□ -0.65
AC004852.2-201ENST00000614289 DCAF8L1A6NGE4 600 aa10.97□□□□□ -0.65
AC004852.2-201ENST00000614289 HOXD11P31277 338 aaPredicted RBP10.96□□□□□ -0.65
AC004852.2-201ENST00000614289 SLC4A1APQ9BWU0 796 aaKnown RBP10.88□□□□□ -0.67
AC004852.2-201ENST00000614289 RNF216Q9NWF9 866 aaPredicted RBP10.84□□□□□ -0.67
AC004852.2-201ENST00000614289 SUPT5HO00267 1087 aaKnown RBP10.82□□□□□ -0.68
AC004852.2-201ENST00000614289 RTN4Q9NQC3 1192 aaKnown RBP10.82□□□□□ -0.68
AC004852.2-201ENST00000614289 UNC13AQ9UPW8 1703 aa10.8□□□□□ -0.68
AC004852.2-201ENST00000614289 CSRNP3Q8WYN3 585 aa10.74□□□□□ -0.69
AC004852.2-201ENST00000614289 ZBTB22O15209 634 aa10.71□□□□□ -0.69
AC004852.2-201ENST00000614289 BICRAQ9NZM4 1560 aa10.7□□□□□ -0.7
AC004852.2-201ENST00000614289 PABPN1Q86U42 306 aaKnown RBP eCLIP10.68□□□□□ -0.7
AC004852.2-201ENST00000614289 CECR2Q9BXF3 1484 aa10.67□□□□□ -0.7
AC004852.2-201ENST00000614289 DNAJC5BQ9UF47 199 aa10.66□□□□□ -0.7
AC004852.2-201ENST00000614289 RSF1Q96T23 1441 aaPredicted RBP10.65□□□□□ -0.7
AC004852.2-201ENST00000614289 MROH2BQ7Z745 1585 aa10.6□□□□□ -0.71
AC004852.2-201ENST00000614289 LHX8Q68G74 356 aa10.57□□□□□ -0.72
AC004852.2-201ENST00000614289 BAZ1AQ9NRL2 1556 aaPredicted RBP10.57□□□□□ -0.72
AC004852.2-201ENST00000614289 SMARCA4P51532 1647 aa10.53□□□□□ -0.72
AC004852.2-201ENST00000614289 WIZO95785 1651 aa10.52□□□□□ -0.73
AC004852.2-201ENST00000614289 SLC4A2P04920 1241 aa10.48□□□□□ -0.73
AC004852.2-201ENST00000614289 DAXXQ9UER7 740 aaPredicted RBP10.46□□□□□ -0.73
AC004852.2-201ENST00000614289 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.45□□□□□ -0.74
AC004852.2-201ENST00000614289 PCDH10Q9P2E7 1040 aa10.43□□□□□ -0.74
AC004852.2-201ENST00000614289 CHRDL2Q6WN34 429 aa10.42□□□□□ -0.74
AC004852.2-201ENST00000614289 PEG3Q9GZU2 1588 aa10.4□□□□□ -0.75
AC004852.2-201ENST00000614289 FOXD4L1Q9NU39 408 aa10.39□□□□□ -0.75
AC004852.2-201ENST00000614289 PRKCSHP14314 528 aaPredicted RBP10.38□□□□□ -0.75
AC004852.2-201ENST00000614289 AMER1Q5JTC6 1135 aaPredicted RBP10.38□□□□□ -0.75
AC004852.2-201ENST00000614289 TOP2AP11388 1531 aaKnown RBP10.38□□□□□ -0.75
AC004852.2-201ENST00000614289 EIF4G1Q04637 1599 aaKnown RBP10.36□□□□□ -0.75
AC004852.2-201ENST00000614289 ATAD2BQ9ULI0 1458 aa10.36□□□□□ -0.75
AC004852.2-201ENST00000614289 SMARCA2P51531 1590 aa10.34□□□□□ -0.75
AC004852.2-201ENST00000614289 CCDC88BA6NC98 1476 aa10.31□□□□□ -0.76
AC004852.2-201ENST00000614289 BAZ1BQ9UIG0 1483 aaKnown RBP10.29□□□□□ -0.76
AC004852.2-201ENST00000614289 NCAPD3P42695 1498 aa10.26□□□□□ -0.77
AC004852.2-201ENST00000614289 HMGXB3Q12766 1538 aa10.23□□□□□ -0.77
AC004852.2-201ENST00000614289 CC2D2AQ9P2K1 1620 aa10.21□□□□□ -0.77
AC004852.2-201ENST00000614289 U3KPZ7 1027 aaPredicted RBP10.18□□□□□ -0.78
AC004852.2-201ENST00000614289 TRIM41Q8WV44 630 aa10.17□□□□□ -0.78
AC004852.2-201ENST00000614289 HAX1O00165 279 aa10.12□□□□□ -0.79
AC004852.2-201ENST00000614289 MYCNP04198 464 aaPredicted RBP10.11□□□□□ -0.79
AC004852.2-201ENST00000614289 DSG3P32926 999 aa10.11□□□□□ -0.79
AC004852.2-201ENST00000614289 ABCC8Q09428 1581 aa10.1□□□□□ -0.79
AC004852.2-201ENST00000614289 CAPN15O75808 1086 aa10.1□□□□□ -0.79
AC004852.2-201ENST00000614289 SPINK5Q9NQ38 1064 aaPredicted RBP10.08□□□□□ -0.8
AC004852.2-201ENST00000614289 ATF5Q9Y2D1 282 aaPredicted RBP10.08□□□□□ -0.8
AC004852.2-201ENST00000614289 TIMELESSQ9UNS1 1208 aa10.07□□□□□ -0.8
AC004852.2-201ENST00000614289 RBM42Q9BTD8 480 aaKnown RBP10.06□□□□□ -0.8
AC004852.2-201ENST00000614289 CFTRP13569 1480 aa10.05□□□□□ -0.8
AC004852.2-201ENST00000614289 WRNQ14191 1432 aaPredicted RBP eCLIP10.02□□□□□ -0.81
AC004852.2-201ENST00000614289 POTEMA6NI47 508 aa10.02□□□□□ -0.81
AC004852.2-201ENST00000614289 CADPSQ9ULU8 1353 aa10.01□□□□□ -0.81
AC004852.2-201ENST00000614289 LOC105371045A0A1W2PR82 267 aa10□□□□□ -0.81
AC004852.2-201ENST00000614289 FAM9AQ8IZU1 332 aaPredicted RBP9.99□□□□□ -0.81
AC004852.2-201ENST00000614289 SYNJ1O43426 1573 aa9.98□□□□□ -0.81
AC004852.2-201ENST00000614289 PRDM2Q13029 1718 aa9.97□□□□□ -0.81
AC004852.2-201ENST00000614289 APLP2Q06481 763 aa9.95□□□□□ -0.82
AC004852.2-201ENST00000614289 NESP48681 1621 aa9.93□□□□□ -0.82
AC004852.2-201ENST00000614289 TOP2BQ02880 1626 aa9.93□□□□□ -0.82
AC004852.2-201ENST00000614289 SOGA1O94964 1423 aa9.93□□□□□ -0.82
AC004852.2-201ENST00000614289 ATXN8OSP0DMR3 200 aa9.92□□□□□ -0.82
AC004852.2-201ENST00000614289 TAOK2Q9UL54 1235 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms