Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 TECPR2-203ENST00000558678 4281 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
KRTAP4-4Q9BYR3 RHCG-201ENST00000268122 1982 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
KRTAP4-4Q9BYR3 OSBPL7-201ENST00000007414 3640 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
KRTAP4-4Q9BYR3 PAX6-231ENST00000606377 6901 ntAPPRIS P4 TSL 5 BASIC2.12□□□□□ -2.07
KRTAP4-4Q9BYR3 ASNSD1-201ENST00000260952 2450 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
KRTAP4-4Q9BYR3 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
KRTAP4-4Q9BYR3 DCAF11-202ENST00000396936 2469 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
KRTAP4-4Q9BYR3 ZNF559-ZNF177-202ENST00000446085 2470 ntTSL 5 BASIC2.12□□□□□ -2.07
KRTAP4-4Q9BYR3 AC068733.1-202ENST00000531479 2456 ntBASIC2.12□□□□□ -2.07
KRTAP4-4Q9BYR3 AMMECR1L-202ENST00000393001 4641 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
KRTAP4-4Q9BYR3 PCNT-201ENST00000359568 10560 ntAPPRIS P2 TSL 1 (best) BASIC2.12□□□□□ -2.07
KRTAP4-4Q9BYR3 SLC3A1-201ENST00000260649 2989 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
KRTAP4-4Q9BYR3 JMJD7-PLA2G4B-201ENST00000342159 2966 ntAPPRIS ALT2 TSL 2 BASIC2.12□□□□□ -2.07
KRTAP4-4Q9BYR3 ZNF839-206ENST00000558850 2971 ntAPPRIS ALT2 TSL 2 BASIC2.12□□□□□ -2.07
KRTAP4-4Q9BYR3 PDE8B-208ENST00000505283 3474 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
KRTAP4-4Q9BYR3 AC064805.1-202ENST00000569279 3493 ntBASIC2.12□□□□□ -2.07
KRTAP4-4Q9BYR3 SERPINB11-205ENST00000544088 1846 ntAPPRIS P1 TSL 2 BASIC2.12□□□□□ -2.07
KRTAP4-4Q9BYR3 LHFPL3-AS2-202ENST00000631061 1832 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
KRTAP4-4Q9BYR3 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
KRTAP4-4Q9BYR3 SORBS2-203ENST00000319471 2824 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
KRTAP4-4Q9BYR3 TMEFF2-202ENST00000392314 2842 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
KRTAP4-4Q9BYR3 PHKB-208ENST00000566044 3829 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
KRTAP4-4Q9BYR3 TP53BP1-201ENST00000263801 6346 ntAPPRIS P3 TSL 1 (best) BASIC2.12□□□□□ -2.07
KRTAP4-4Q9BYR3 AC105342.1-201ENST00000378334 6848 ntBASIC2.12□□□□□ -2.07
KRTAP4-4Q9BYR3 PEX1-203ENST00000428214 3681 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
KRTAP4-4Q9BYR3 SLC13A5-201ENST00000293800 3176 ntTSL 2 BASIC2.12□□□□□ -2.07
KRTAP4-4Q9BYR3 LY6G5B-207ENST00000375864 2654 ntAPPRIS P2 TSL 1 (best) BASIC2.12□□□□□ -2.07
KRTAP4-4Q9BYR3 HNRNPF-207ENST00000544000 2676 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
KRTAP4-4Q9BYR3 KIAA1549-202ENST00000440172 12379 ntAPPRIS P3 TSL 1 (best) BASIC2.12□□□□□ -2.07
KRTAP4-4Q9BYR3 C2orf71-201ENST00000331664 7044 ntAPPRIS P1 TSL 2 BASIC2.12□□□□□ -2.07
KRTAP4-4Q9BYR3 SLC25A19-201ENST00000320362 1651 ntAPPRIS P1 TSL 2 BASIC2.12□□□□□ -2.07
KRTAP4-4Q9BYR3 CCNB1IP1-206ENST00000437553 1686 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
KRTAP4-4Q9BYR3 IGSF11-203ENST00000425327 3525 ntTSL 2 BASIC2.12□□□□□ -2.07
KRTAP4-4Q9BYR3 AC091806.1-201ENST00000452690 3000 ntTSL 2 BASIC2.12□□□□□ -2.07
KRTAP4-4Q9BYR3 NSRP1-201ENST00000247026 2541 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
KRTAP4-4Q9BYR3 MDC1-201ENST00000376406 7576 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
KRTAP4-4Q9BYR3 OSBPL9-213ENST00000486942 2529 ntTSL 2 BASIC2.12□□□□□ -2.07
KRTAP4-4Q9BYR3 ALK-207ENST00000642122 2513 ntBASIC2.12□□□□□ -2.07
KRTAP4-4Q9BYR3 HERC2P2-205ENST00000619021 5746 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
KRTAP4-4Q9BYR3 SCNM1-202ENST00000368905 2016 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
KRTAP4-4Q9BYR3 AC108058.1-201ENST00000457290 2044 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
KRTAP4-4Q9BYR3 FUT10-211ENST00000524021 2042 ntTSL 2 BASIC2.12□□□□□ -2.07
KRTAP4-4Q9BYR3 KCNMA1-289ENST00000640807 3387 ntAPPRIS ALT2 TSL 1 (best) BASIC2.12□□□□□ -2.07
KRTAP4-4Q9BYR3 SUPT7L-204ENST00000406540 2869 ntAPPRIS ALT1 TSL 1 (best) BASIC2.12□□□□□ -2.07
KRTAP4-4Q9BYR3 EXOC7-201ENST00000332065 4596 ntAPPRIS P3 TSL 2 BASIC2.12□□□□□ -2.07
KRTAP4-4Q9BYR3 CHTF8P1-201ENST00000414660 1541 ntBASIC2.12□□□□□ -2.07
KRTAP4-4Q9BYR3 GSDMB-212ENST00000520542 1546 ntAPPRIS ALT2 TSL 2 BASIC2.12□□□□□ -2.07
KRTAP4-4Q9BYR3 NLRP10-201ENST00000328600 2350 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
KRTAP4-4Q9BYR3 DUXAP8-203ENST00000437781 2398 ntTSL 2 BASIC2.12□□□□□ -2.07
KRTAP4-4Q9BYR3 AC008966.1-201ENST00000502171 2367 ntTSL 2 BASIC2.12□□□□□ -2.07
KRTAP4-4Q9BYR3 LRP12-202ENST00000424843 4092 ntTSL 2 BASIC2.12□□□□□ -2.07
KRTAP4-4Q9BYR3 MAPRE2-204ENST00000538170 4093 ntTSL 2 BASIC2.12□□□□□ -2.07
KRTAP4-4Q9BYR3 MYO19-213ENST00000614623 4054 ntAPPRIS P1 TSL 2 BASIC2.12□□□□□ -2.07
KRTAP4-4Q9BYR3 ITGA10-201ENST00000369304 5269 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
KRTAP4-4Q9BYR3 GOSR2-213ENST00000638216 3574 ntTSL 5 BASIC2.11□□□□□ -2.07
KRTAP4-4Q9BYR3 ZWINT-204ENST00000395405 1851 ntAPPRIS P3 TSL 2 BASIC2.11□□□□□ -2.07
KRTAP4-4Q9BYR3 ZNF619-209ENST00000521353 1869 ntAPPRIS P4 TSL 5 BASIC2.11□□□□□ -2.07
KRTAP4-4Q9BYR3 MED12-203ENST00000374102 6827 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
KRTAP4-4Q9BYR3 GIMAP6-203ENST00000618759 3910 ntAPPRIS ALT2 TSL 2 BASIC2.11□□□□□ -2.07
KRTAP4-4Q9BYR3 LRIT2-201ENST00000372113 3081 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
KRTAP4-4Q9BYR3 ZFP1-203ENST00000464850 3067 ntTSL 2 BASIC2.11□□□□□ -2.07
KRTAP4-4Q9BYR3 HSPA4L-201ENST00000296464 10790 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
KRTAP4-4Q9BYR3 PMEL-204ENST00000548493 2204 ntAPPRIS P3 TSL 2 BASIC2.11□□□□□ -2.07
KRTAP4-4Q9BYR3 ARHGEF39-201ENST00000378387 3769 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
KRTAP4-4Q9BYR3 JDP2-204ENST00000437176 3775 ntAPPRIS P1 TSL 3 BASIC2.11□□□□□ -2.07
KRTAP4-4Q9BYR3 SCG2-201ENST00000305409 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
KRTAP4-4Q9BYR3 FUT6-203ENST00000524754 2598 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
KRTAP4-4Q9BYR3 LINC01567-201ENST00000414816 2907 ntTSL 2 BASIC2.11□□□□□ -2.07
KRTAP4-4Q9BYR3 HPS4-202ENST00000398145 4497 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
KRTAP4-4Q9BYR3 CALN1-202ENST00000395275 9459 ntAPPRIS ALT1 TSL 5 BASIC2.11□□□□□ -2.07
KRTAP4-4Q9BYR3 FP565260.1-201ENST00000617716 3264 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
KRTAP4-4Q9BYR3 ABCC12-201ENST00000311303 5168 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
KRTAP4-4Q9BYR3 PRAMEF6-201ENST00000376189 1720 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
KRTAP4-4Q9BYR3 PRAMEF6-202ENST00000415464 1720 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
KRTAP4-4Q9BYR3 PRAMEF5-201ENST00000622421 1720 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
KRTAP4-4Q9BYR3 EXTL2-202ENST00000370114 3985 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
KRTAP4-4Q9BYR3 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
KRTAP4-4Q9BYR3 AC074281.1-201ENST00000436419 2081 ntBASIC2.11□□□□□ -2.07
KRTAP4-4Q9BYR3 AC024651.2-201ENST00000562480 2098 ntBASIC2.11□□□□□ -2.07
KRTAP4-4Q9BYR3 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC2.11□□□□□ -2.07
KRTAP4-4Q9BYR3 RFC5-201ENST00000392542 2449 ntTSL 2 BASIC2.11□□□□□ -2.07
KRTAP4-4Q9BYR3 AC002519.1-201ENST00000570073 2792 ntBASIC2.11□□□□□ -2.07
KRTAP4-4Q9BYR3 NOP2-223ENST00000620535 2791 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
KRTAP4-4Q9BYR3 PXN-202ENST00000267257 3835 ntAPPRIS ALT2 TSL 5 BASIC2.11□□□□□ -2.07
KRTAP4-4Q9BYR3 GOLGA8F-201ENST00000526619 5237 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
KRTAP4-4Q9BYR3 DERL1-201ENST00000259512 3340 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
KRTAP4-4Q9BYR3 RASGEF1B-201ENST00000264400 2277 ntAPPRIS P3 TSL 2 BASIC2.11□□□□□ -2.07
KRTAP4-4Q9BYR3 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
KRTAP4-4Q9BYR3 POLR3C-202ENST00000369294 1590 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
KRTAP4-4Q9BYR3 ATXN1L-201ENST00000427980 7886 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
KRTAP4-4Q9BYR3 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC2.11□□□□□ -2.07
KRTAP4-4Q9BYR3 TRPC7-206ENST00000513104 2987 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
KRTAP4-4Q9BYR3 ANKLE2-208ENST00000542282 3302 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
KRTAP4-4Q9BYR3 FAM153A-223ENST00000614127 1912 ntAPPRIS ALT2 TSL 5 BASIC2.11□□□□□ -2.07
KRTAP4-4Q9BYR3 CMIP-211ENST00000621537 4000 ntTSL 5 BASIC2.11□□□□□ -2.07
KRTAP4-4Q9BYR3 MAP3K14-202ENST00000376926 4583 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
KRTAP4-4Q9BYR3 RRP12-203ENST00000414986 4242 ntAPPRIS ALT1 TSL 2 BASIC2.11□□□□□ -2.07
KRTAP4-4Q9BYR3 PRRC2B-203ENST00000405995 9157 ntTSL 5 BASIC2.11□□□□□ -2.07
KRTAP4-4Q9BYR3 CISD1-201ENST00000333926 2479 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
KRTAP4-4Q9BYR3 PRPF38B-201ENST00000370021 3728 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 133.5 ms