RNA–Protein interactions for RNA: ENST00000548493.5

PMEL-204, Transcript of premelanosome protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene PMEL, Length 2,204 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMEL-204ENST00000548493 NISCHQ9Y2I1 1504 aa25.53■■□□□ 1.68
PMEL-204ENST00000548493 SHROOM4Q9ULL8 1493 aa21.71■■□□□ 1.07
PMEL-204ENST00000548493 CCDC180Q9P1Z9 1646 aa21.7■■□□□ 1.06
PMEL-204ENST00000548493 ZCCHC6Q5VYS8 1495 aaKnown RBP21.63■■□□□ 1.05
PMEL-204ENST00000548493 SUPT5HO00267 1087 aaKnown RBP21.35■■□□□ 1.01
PMEL-204ENST00000548493 DCAF1Q9Y4B6 1507 aa21■□□□□ 0.95
PMEL-204ENST00000548493 DCAF8L2P0C7V8 631 aa20.98■□□□□ 0.95
PMEL-204ENST00000548493 CHIC1Q5VXU3 224 aa20.88■□□□□ 0.93
PMEL-204ENST00000548493 MYO15BQ96JP2 1530 aa20.83■□□□□ 0.92
PMEL-204ENST00000548493 HRCP23327 699 aa20.43■□□□□ 0.86
PMEL-204ENST00000548493 ABCC9O60706 1549 aa20.43■□□□□ 0.86
PMEL-204ENST00000548493 PCGF6Q9BYE7 350 aa20.29■□□□□ 0.84
PMEL-204ENST00000548493 SCRIBQ14160 1630 aa20.27■□□□□ 0.84
PMEL-204ENST00000548493 RSF1Q96T23 1441 aaPredicted RBP20.22■□□□□ 0.83
PMEL-204ENST00000548493 LOC105371045A0A1W2PR82 267 aa20.22■□□□□ 0.83
PMEL-204ENST00000548493 RB1CC1Q8TDY2 1594 aa20.05■□□□□ 0.8
PMEL-204ENST00000548493 NACADO15069 1562 aa20.02■□□□□ 0.79
PMEL-204ENST00000548493 TRIM26Q12899 539 aaPredicted RBP19.95■□□□□ 0.78
PMEL-204ENST00000548493 TRIM41Q8WV44 630 aa19.92■□□□□ 0.78
PMEL-204ENST00000548493 PPARGC1BQ86YN6 1023 aaKnown RBP19.91■□□□□ 0.78
PMEL-204ENST00000548493 CECR2Q9BXF3 1484 aa19.86■□□□□ 0.77
PMEL-204ENST00000548493 MROH2BQ7Z745 1585 aa19.83■□□□□ 0.76
PMEL-204ENST00000548493 WIZO95785 1651 aa19.73■□□□□ 0.75
PMEL-204ENST00000548493 FAM9AQ8IZU1 332 aaPredicted RBP19.7■□□□□ 0.74
PMEL-204ENST00000548493 BAZ1AQ9NRL2 1556 aaPredicted RBP19.65■□□□□ 0.74
PMEL-204ENST00000548493 ZEB1P37275 1124 aaPredicted RBP19.59■□□□□ 0.73
PMEL-204ENST00000548493 EIF4G1Q04637 1599 aaKnown RBP19.57■□□□□ 0.72
PMEL-204ENST00000548493 PELP1Q8IZL8 1130 aaKnown RBP19.56■□□□□ 0.72
PMEL-204ENST00000548493 EHMT2Q96KQ7 1210 aa19.48■□□□□ 0.71
PMEL-204ENST00000548493 TOP2AP11388 1531 aaKnown RBP19.46■□□□□ 0.71
PMEL-204ENST00000548493 SMARCA4P51532 1647 aa19.42■□□□□ 0.7
PMEL-204ENST00000548493 UNC13AQ9UPW8 1703 aa19.36■□□□□ 0.69
PMEL-204ENST00000548493 CCDC88BA6NC98 1476 aa19.35■□□□□ 0.69
PMEL-204ENST00000548493 SMARCA2P51531 1590 aa19.34■□□□□ 0.69
PMEL-204ENST00000548493 MYT1Q01538 1121 aa19.33■□□□□ 0.68
PMEL-204ENST00000548493 ABCC8Q09428 1581 aa19.3■□□□□ 0.68
PMEL-204ENST00000548493 WRNQ14191 1432 aaPredicted RBP eCLIP19.19■□□□□ 0.66
PMEL-204ENST00000548493 SOGA1O94964 1423 aa19.14■□□□□ 0.65
PMEL-204ENST00000548493 EEA1Q15075 1411 aa19.14■□□□□ 0.65
PMEL-204ENST00000548493 CEP162Q5TB80 1403 aa19.13■□□□□ 0.65
PMEL-204ENST00000548493 TNIKQ9UKE5 1360 aa19.12■□□□□ 0.65
PMEL-204ENST00000548493 BICRAQ9NZM4 1560 aa19.11■□□□□ 0.65
PMEL-204ENST00000548493 PEG3Q9GZU2 1588 aa19.08■□□□□ 0.65
PMEL-204ENST00000548493 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.07■□□□□ 0.64
PMEL-204ENST00000548493 CSRNP3Q8WYN3 585 aa19.06■□□□□ 0.64
PMEL-204ENST00000548493 CCER1Q8TC90 406 aaPredicted RBP19.04■□□□□ 0.64
PMEL-204ENST00000548493 RUSC2Q8N2Y8 1516 aa19.04■□□□□ 0.64
PMEL-204ENST00000548493 PABPN1Q86U42 306 aaKnown RBP eCLIP19.01■□□□□ 0.63
PMEL-204ENST00000548493 GOLGA3Q08378 1498 aa18.98■□□□□ 0.63
PMEL-204ENST00000548493 UBTFP17480 764 aaKnown RBP18.94■□□□□ 0.62
PMEL-204ENST00000548493 SCAF1Q9H7N4 1312 aaKnown RBP18.92■□□□□ 0.62
PMEL-204ENST00000548493 SYNJ1O43426 1573 aa18.9■□□□□ 0.62
PMEL-204ENST00000548493 TTBK1Q5TCY1 1321 aaPredicted RBP18.89■□□□□ 0.61
PMEL-204ENST00000548493 ATAD2BQ9ULI0 1458 aa18.88■□□□□ 0.61
PMEL-204ENST00000548493 KIF21BO75037 1637 aa18.87■□□□□ 0.61
PMEL-204ENST00000548493 CEP164Q9UPV0 1460 aa18.87■□□□□ 0.61
PMEL-204ENST00000548493 BAZ1BQ9UIG0 1483 aaKnown RBP18.83■□□□□ 0.6
PMEL-204ENST00000548493 CLIP1P30622 1438 aa18.74■□□□□ 0.59
PMEL-204ENST00000548493 DIEXFQ68CQ4 756 aaKnown RBP18.74■□□□□ 0.59
PMEL-204ENST00000548493 VPS8Q8N3P4 1428 aa18.7■□□□□ 0.58
PMEL-204ENST00000548493 TOP2BQ02880 1626 aa18.69■□□□□ 0.58
PMEL-204ENST00000548493 RAPGEF2Q9Y4G8 1499 aa18.68■□□□□ 0.58
PMEL-204ENST00000548493 ACIN1Q9UKV3 1341 aaKnown RBP18.68■□□□□ 0.58
PMEL-204ENST00000548493 BIVM-ERCC5R4GMW8 1640 aa18.63■□□□□ 0.57
PMEL-204ENST00000548493 NEUROD1Q13562 356 aa18.62■□□□□ 0.57
PMEL-204ENST00000548493 ZNF316A6NFI3 1004 aaPredicted RBP18.61■□□□□ 0.57
PMEL-204ENST00000548493 HNRNPUL2Q1KMD3 747 aaKnown RBP18.58■□□□□ 0.56
PMEL-204ENST00000548493 APLP2Q06481 763 aa18.57■□□□□ 0.56
PMEL-204ENST00000548493 CENPBP07199 599 aaPredicted RBP18.56■□□□□ 0.56
PMEL-204ENST00000548493 ERICH3Q5RHP9 1530 aa18.56■□□□□ 0.56
PMEL-204ENST00000548493 HMGXB3Q12766 1538 aa18.53■□□□□ 0.56
PMEL-204ENST00000548493 PRXQ9BXM0 1461 aa18.53■□□□□ 0.56
PMEL-204ENST00000548493 NCAPD3P42695 1498 aa18.51■□□□□ 0.55
PMEL-204ENST00000548493 RANGAP1P46060 587 aaPredicted RBP18.46■□□□□ 0.55
PMEL-204ENST00000548493 CUX1P39880 1505 aa18.45■□□□□ 0.54
PMEL-204ENST00000548493 ARAP1Q96P48 1450 aa18.45■□□□□ 0.54
PMEL-204ENST00000548493 GTF3C3Q9Y5Q9 886 aa18.43■□□□□ 0.54
PMEL-204ENST00000548493 KIF27Q86VH2 1401 aa18.4■□□□□ 0.54
PMEL-204ENST00000548493 CFTRP13569 1480 aa18.39■□□□□ 0.53
PMEL-204ENST00000548493 CLSPNQ9HAW4 1339 aa18.35■□□□□ 0.53
PMEL-204ENST00000548493 MIER1Q8N108 512 aa18.32■□□□□ 0.52
PMEL-204ENST00000548493 KANK4Q5T7N3 995 aaPredicted RBP18.31■□□□□ 0.52
PMEL-204ENST00000548493 DHX57Q6P158 1386 aaKnown RBP18.31■□□□□ 0.52
PMEL-204ENST00000548493 RRBP1Q9P2E9 1410 aaKnown RBP18.3■□□□□ 0.52
PMEL-204ENST00000548493 PRDM2Q13029 1718 aa18.29■□□□□ 0.52
PMEL-204ENST00000548493 ARHGAP35Q9NRY4 1499 aa18.27■□□□□ 0.52
PMEL-204ENST00000548493 YTHDC1Q96MU7 727 aaKnown RBP18.24■□□□□ 0.51
PMEL-204ENST00000548493 CUX2O14529 1486 aa18.23■□□□□ 0.51
PMEL-204ENST00000548493 CCNB3Q8WWL7 1395 aa18.19■□□□□ 0.5
PMEL-204ENST00000548493 IGF1RP08069 1367 aa18.18■□□□□ 0.5
PMEL-204ENST00000548493 CADPSQ9ULU8 1353 aa18.14■□□□□ 0.49
PMEL-204ENST00000548493 MAP3K1Q13233 1512 aa18.14■□□□□ 0.49
PMEL-204ENST00000548493 PRKCSHP14314 528 aaPredicted RBP18.13■□□□□ 0.49
PMEL-204ENST00000548493 TIAM1Q13009 1591 aa18.11■□□□□ 0.49
PMEL-204ENST00000548493 FGD5Q6ZNL6 1462 aa18.1■□□□□ 0.49
PMEL-204ENST00000548493 CARMIL1Q5VZK9 1371 aa18.1■□□□□ 0.49
PMEL-204ENST00000548493 LRRC9Q6ZRR7 1453 aa18.04■□□□□ 0.48
PMEL-204ENST00000548493 RAB3GAP2Q9H2M9 1393 aa18.02■□□□□ 0.48
PMEL-204ENST00000548493 ITGAEP38570 1179 aa18.02■□□□□ 0.47
PMEL-204ENST00000548493 FHAD1B1AJZ9 1412 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms