RNA–Protein interactions for RNA: ENST00000372113.6

LRIT2-201, Transcript of leucine rich repeat, Ig-like and transmembrane domains 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRIT2, Length 3,081 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT2-201ENST00000372113 NISCHQ9Y2I1 1504 aa23■■□□□ 1.27
LRIT2-201ENST00000372113 SHROOM4Q9ULL8 1493 aa20.06■□□□□ 0.8
LRIT2-201ENST00000372113 SUPT5HO00267 1087 aaKnown RBP19.87■□□□□ 0.77
LRIT2-201ENST00000372113 CCDC180Q9P1Z9 1646 aa19.71■□□□□ 0.75
LRIT2-201ENST00000372113 HRCP23327 699 aa19.53■□□□□ 0.72
LRIT2-201ENST00000372113 MYO15BQ96JP2 1530 aa19.44■□□□□ 0.7
LRIT2-201ENST00000372113 PCGF6Q9BYE7 350 aa19.38■□□□□ 0.69
LRIT2-201ENST00000372113 ZCCHC6Q5VYS8 1495 aaKnown RBP19.38■□□□□ 0.69
LRIT2-201ENST00000372113 CHIC1Q5VXU3 224 aa19.36■□□□□ 0.69
LRIT2-201ENST00000372113 PPARGC1BQ86YN6 1023 aaKnown RBP19.33■□□□□ 0.68
LRIT2-201ENST00000372113 DCAF8L2P0C7V8 631 aa19.2■□□□□ 0.66
LRIT2-201ENST00000372113 LOC105371045A0A1W2PR82 267 aa19.02■□□□□ 0.63
LRIT2-201ENST00000372113 DCAF1Q9Y4B6 1507 aa18.86■□□□□ 0.61
LRIT2-201ENST00000372113 TRIM26Q12899 539 aaPredicted RBP18.7■□□□□ 0.58
LRIT2-201ENST00000372113 ABCC9O60706 1549 aa18.64■□□□□ 0.57
LRIT2-201ENST00000372113 EHMT2Q96KQ7 1210 aa18.44■□□□□ 0.54
LRIT2-201ENST00000372113 SCRIBQ14160 1630 aa18.44■□□□□ 0.54
LRIT2-201ENST00000372113 FAM9AQ8IZU1 332 aaPredicted RBP18.43■□□□□ 0.54
LRIT2-201ENST00000372113 SCAF1Q9H7N4 1312 aaKnown RBP18.4■□□□□ 0.54
LRIT2-201ENST00000372113 ZEB1P37275 1124 aaPredicted RBP18.36■□□□□ 0.53
LRIT2-201ENST00000372113 NACADO15069 1562 aa18.32■□□□□ 0.52
LRIT2-201ENST00000372113 TRIM41Q8WV44 630 aa18.31■□□□□ 0.52
LRIT2-201ENST00000372113 PELP1Q8IZL8 1130 aaKnown RBP18.26■□□□□ 0.51
LRIT2-201ENST00000372113 RSF1Q96T23 1441 aaPredicted RBP18.15■□□□□ 0.5
LRIT2-201ENST00000372113 RB1CC1Q8TDY2 1594 aa18.11■□□□□ 0.49
LRIT2-201ENST00000372113 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.07■□□□□ 0.48
LRIT2-201ENST00000372113 NEUROD1Q13562 356 aa18.01■□□□□ 0.47
LRIT2-201ENST00000372113 CECR2Q9BXF3 1484 aa18■□□□□ 0.47
LRIT2-201ENST00000372113 ACIN1Q9UKV3 1341 aaKnown RBP17.97■□□□□ 0.47
LRIT2-201ENST00000372113 CCER1Q8TC90 406 aaPredicted RBP17.97■□□□□ 0.47
LRIT2-201ENST00000372113 TTBK1Q5TCY1 1321 aaPredicted RBP17.92■□□□□ 0.46
LRIT2-201ENST00000372113 MROH2BQ7Z745 1585 aa17.88■□□□□ 0.45
LRIT2-201ENST00000372113 GTF3C3Q9Y5Q9 886 aa17.87■□□□□ 0.45
LRIT2-201ENST00000372113 UNC13AQ9UPW8 1703 aa17.86■□□□□ 0.45
LRIT2-201ENST00000372113 DIEXFQ68CQ4 756 aaKnown RBP17.84■□□□□ 0.45
LRIT2-201ENST00000372113 WIZO95785 1651 aa17.76■□□□□ 0.43
LRIT2-201ENST00000372113 PABPN1Q86U42 306 aaKnown RBP eCLIP17.76■□□□□ 0.43
LRIT2-201ENST00000372113 CENPBP07199 599 aaPredicted RBP17.72■□□□□ 0.43
LRIT2-201ENST00000372113 BAZ1AQ9NRL2 1556 aaPredicted RBP17.68■□□□□ 0.42
LRIT2-201ENST00000372113 BICRAQ9NZM4 1560 aa17.67■□□□□ 0.42
LRIT2-201ENST00000372113 YTHDC1Q96MU7 727 aaKnown RBP17.64■□□□□ 0.41
LRIT2-201ENST00000372113 SMARCA4P51532 1647 aa17.59■□□□□ 0.41
LRIT2-201ENST00000372113 ZNF316A6NFI3 1004 aaPredicted RBP17.53■□□□□ 0.4
LRIT2-201ENST00000372113 ABCC8Q09428 1581 aa17.49■□□□□ 0.39
LRIT2-201ENST00000372113 CCDC88BA6NC98 1476 aa17.48■□□□□ 0.39
LRIT2-201ENST00000372113 CEP162Q5TB80 1403 aa17.48■□□□□ 0.39
LRIT2-201ENST00000372113 MIER1Q8N108 512 aa17.46■□□□□ 0.39
LRIT2-201ENST00000372113 TOP2AP11388 1531 aaKnown RBP17.45■□□□□ 0.38
LRIT2-201ENST00000372113 UBTFP17480 764 aaKnown RBP17.44■□□□□ 0.38
LRIT2-201ENST00000372113 SOGA1O94964 1423 aa17.43■□□□□ 0.38
LRIT2-201ENST00000372113 WRNQ14191 1432 aaPredicted RBP eCLIP17.43■□□□□ 0.38
LRIT2-201ENST00000372113 EIF4G1Q04637 1599 aaKnown RBP17.42■□□□□ 0.38
LRIT2-201ENST00000372113 HNRNPUL2Q1KMD3 747 aaKnown RBP17.41■□□□□ 0.38
LRIT2-201ENST00000372113 MYT1Q01538 1121 aa17.38■□□□□ 0.37
LRIT2-201ENST00000372113 RUSC2Q8N2Y8 1516 aa17.37■□□□□ 0.37
LRIT2-201ENST00000372113 SMARCA2P51531 1590 aa17.36■□□□□ 0.37
LRIT2-201ENST00000372113 TNIKQ9UKE5 1360 aa17.34■□□□□ 0.37
LRIT2-201ENST00000372113 CSRNP3Q8WYN3 585 aa17.34■□□□□ 0.37
LRIT2-201ENST00000372113 PEG3Q9GZU2 1588 aa17.27■□□□□ 0.36
LRIT2-201ENST00000372113 ATAD2BQ9ULI0 1458 aa17.25■□□□□ 0.35
LRIT2-201ENST00000372113 RANGAP1P46060 587 aaPredicted RBP17.23■□□□□ 0.35
LRIT2-201ENST00000372113 BAZ1BQ9UIG0 1483 aaKnown RBP17.16■□□□□ 0.34
LRIT2-201ENST00000372113 GOLGA3Q08378 1498 aa17.15■□□□□ 0.34
LRIT2-201ENST00000372113 EEA1Q15075 1411 aa17.1■□□□□ 0.33
LRIT2-201ENST00000372113 APLP2Q06481 763 aa17.07■□□□□ 0.32
LRIT2-201ENST00000372113 CLIP1P30622 1438 aa17.05■□□□□ 0.32
LRIT2-201ENST00000372113 SUPT16HQ9Y5B9 1047 aaKnown RBP17.03■□□□□ 0.32
LRIT2-201ENST00000372113 NCAPD3P42695 1498 aa16.98■□□□□ 0.31
LRIT2-201ENST00000372113 CEP164Q9UPV0 1460 aa16.97■□□□□ 0.31
LRIT2-201ENST00000372113 VPS8Q8N3P4 1428 aa16.97■□□□□ 0.31
LRIT2-201ENST00000372113 RAPGEF2Q9Y4G8 1499 aa16.93■□□□□ 0.3
LRIT2-201ENST00000372113 SYNJ1O43426 1573 aa16.93■□□□□ 0.3
LRIT2-201ENST00000372113 HMGXB3Q12766 1538 aa16.92■□□□□ 0.3
LRIT2-201ENST00000372113 DHX57Q6P158 1386 aaKnown RBP16.91■□□□□ 0.3
LRIT2-201ENST00000372113 KCNH8Q96L42 1107 aa16.9■□□□□ 0.3
LRIT2-201ENST00000372113 TSHZ2Q9NRE2 1034 aa16.9■□□□□ 0.3
LRIT2-201ENST00000372113 KIF21BO75037 1637 aa16.88■□□□□ 0.29
LRIT2-201ENST00000372113 KANK4Q5T7N3 995 aaPredicted RBP16.87■□□□□ 0.29
LRIT2-201ENST00000372113 BCANQ96GW7 911 aa16.85■□□□□ 0.29
LRIT2-201ENST00000372113 ITGAEP38570 1179 aa16.83■□□□□ 0.29
LRIT2-201ENST00000372113 CLSPNQ9HAW4 1339 aa16.78■□□□□ 0.28
LRIT2-201ENST00000372113 CC2D2AQ9P2K1 1620 aa16.77■□□□□ 0.28
LRIT2-201ENST00000372113 ANP32EQ9BTT0 268 aa16.75■□□□□ 0.27
LRIT2-201ENST00000372113 CFTRP13569 1480 aa16.73■□□□□ 0.27
LRIT2-201ENST00000372113 TOP2BQ02880 1626 aa16.72■□□□□ 0.27
LRIT2-201ENST00000372113 ARAP1Q96P48 1450 aa16.7■□□□□ 0.26
LRIT2-201ENST00000372113 FKBP8Q14318 412 aa16.7■□□□□ 0.26
LRIT2-201ENST00000372113 DDX10Q13206 875 aaKnown RBP16.67■□□□□ 0.26
LRIT2-201ENST00000372113 CUX1P39880 1505 aa16.67■□□□□ 0.26
LRIT2-201ENST00000372113 BIVM-ERCC5R4GMW8 1640 aa16.66■□□□□ 0.26
LRIT2-201ENST00000372113 HIRIP3Q9BW71 556 aaPredicted RBP16.64■□□□□ 0.25
LRIT2-201ENST00000372113 CADPSQ9ULU8 1353 aa16.62■□□□□ 0.25
LRIT2-201ENST00000372113 SIN3AQ96ST3 1273 aa16.61■□□□□ 0.25
LRIT2-201ENST00000372113 RRBP1Q9P2E9 1410 aaKnown RBP16.61■□□□□ 0.25
LRIT2-201ENST00000372113 CCNB3Q8WWL7 1395 aa16.61■□□□□ 0.25
LRIT2-201ENST00000372113 RAB3GAP2Q9H2M9 1393 aa16.58■□□□□ 0.25
LRIT2-201ENST00000372113 PRXQ9BXM0 1461 aa16.57■□□□□ 0.24
LRIT2-201ENST00000372113 TRIM52Q96A61 297 aa16.57■□□□□ 0.24
LRIT2-201ENST00000372113 BCL11AQ9H165 835 aa16.56■□□□□ 0.24
LRIT2-201ENST00000372113 DNAJC5BQ9UF47 199 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms