Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 GOLGA6L1-201ENST00000614055 2620 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
RSPO4Q2I0M5 LINC01180-201ENST00000589259 2025 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
RSPO4Q2I0M5 RYBP-201ENST00000477973 7215 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
RSPO4Q2I0M5 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
RSPO4Q2I0M5 BRS3-201ENST00000370648 2833 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
RSPO4Q2I0M5 CASP12-201ENST00000375726 1306 ntAPPRIS P5 TSL 1 (best) BASIC7.28□□□□□ -1.24
RSPO4Q2I0M5 CLDN16-201ENST00000264734 3273 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
RSPO4Q2I0M5 RECQL5-203ENST00000420326 3710 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
RSPO4Q2I0M5 LINC02312-201ENST00000555187 3046 ntTSL 2 BASIC7.28□□□□□ -1.24
RSPO4Q2I0M5 SSPO-201ENST00000378016 15589 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
RSPO4Q2I0M5 TRAPPC2-203ENST00000380579 2776 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
RSPO4Q2I0M5 LINC01427-204ENST00000635299 1978 ntTSL 5 BASIC7.28□□□□□ -1.24
RSPO4Q2I0M5 THADA-202ENST00000402360 2974 ntTSL 5 BASIC7.28□□□□□ -1.24
RSPO4Q2I0M5 GANC-206ENST00000566442 2512 ntTSL 2 BASIC7.28□□□□□ -1.24
RSPO4Q2I0M5 COPG1-201ENST00000314797 3078 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
RSPO4Q2I0M5 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC7.28□□□□□ -1.24
RSPO4Q2I0M5 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC7.28□□□□□ -1.24
RSPO4Q2I0M5 MIR99A-201ENST00000384906 81 ntBASIC7.28□□□□□ -1.24
RSPO4Q2I0M5 H2AFZP3-201ENST00000394213 387 ntBASIC7.28□□□□□ -1.24
RSPO4Q2I0M5 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC7.28□□□□□ -1.24
RSPO4Q2I0M5 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC7.28□□□□□ -1.24
RSPO4Q2I0M5 RPL18AP14-201ENST00000417685 526 ntBASIC7.28□□□□□ -1.24
RSPO4Q2I0M5 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC7.28□□□□□ -1.24
RSPO4Q2I0M5 AL109924.2-201ENST00000419800 934 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
RSPO4Q2I0M5 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC7.28□□□□□ -1.24
RSPO4Q2I0M5 RPL23AP85-201ENST00000421838 433 ntBASIC7.28□□□□□ -1.24
RSPO4Q2I0M5 ZDHHC20P2-201ENST00000424108 429 ntBASIC7.28□□□□□ -1.24
RSPO4Q2I0M5 AC005534.2-201ENST00000431047 433 ntBASIC7.28□□□□□ -1.24
RSPO4Q2I0M5 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC7.28□□□□□ -1.24
RSPO4Q2I0M5 AL161626.1-201ENST00000441480 490 ntBASIC7.28□□□□□ -1.24
RSPO4Q2I0M5 AC245291.3-201ENST00000443400 292 ntBASIC7.28□□□□□ -1.24
RSPO4Q2I0M5 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC7.28□□□□□ -1.24
RSPO4Q2I0M5 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC7.28□□□□□ -1.24
RSPO4Q2I0M5 SNRPGP9-201ENST00000456025 225 ntBASIC7.28□□□□□ -1.24
RSPO4Q2I0M5 RN7SL392P-201ENST00000473024 299 ntBASIC7.28□□□□□ -1.24
RSPO4Q2I0M5 MYL6P4-201ENST00000477911 453 ntBASIC7.28□□□□□ -1.24
RSPO4Q2I0M5 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
RSPO4Q2I0M5 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC7.28□□□□□ -1.24
RSPO4Q2I0M5 AC006499.4-201ENST00000510947 694 ntBASIC7.28□□□□□ -1.24
RSPO4Q2I0M5 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC7.28□□□□□ -1.24
RSPO4Q2I0M5 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
RSPO4Q2I0M5 AC115676.1-201ENST00000538416 329 ntTSL 3 BASIC7.28□□□□□ -1.24
RSPO4Q2I0M5 MUCL1-202ENST00000546809 439 ntAPPRIS ALT2 TSL 3 BASIC7.28□□□□□ -1.24
RSPO4Q2I0M5 FCF1-203ENST00000553615 954 ntTSL 3 BASIC7.28□□□□□ -1.24
RSPO4Q2I0M5 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC7.28□□□□□ -1.24
RSPO4Q2I0M5 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC7.28□□□□□ -1.24
RSPO4Q2I0M5 LINC01572-204ENST00000570035 831 ntTSL 3 BASIC7.28□□□□□ -1.24
RSPO4Q2I0M5 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC7.28□□□□□ -1.24
RSPO4Q2I0M5 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC7.28□□□□□ -1.24
RSPO4Q2I0M5 DYNLL1P1-201ENST00000595442 269 ntBASIC7.28□□□□□ -1.24
RSPO4Q2I0M5 AC092032.1-201ENST00000603090 165 ntBASIC7.28□□□□□ -1.24
RSPO4Q2I0M5 AL133247.2-201ENST00000603236 482 ntBASIC7.28□□□□□ -1.24
RSPO4Q2I0M5 CDC37L1-AS1-201ENST00000607997 463 ntTSL 5 BASIC7.28□□□□□ -1.24
RSPO4Q2I0M5 AC040896.1-201ENST00000613819 479 ntBASIC7.28□□□□□ -1.24
RSPO4Q2I0M5 CCL14-202ENST00000618404 898 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
RSPO4Q2I0M5 AC008121.3-201ENST00000618726 433 ntBASIC7.28□□□□□ -1.24
RSPO4Q2I0M5 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC7.28□□□□□ -1.24
RSPO4Q2I0M5 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC7.28□□□□□ -1.24
RSPO4Q2I0M5 CASC19-212ENST00000641153 1287 ntBASIC7.28□□□□□ -1.24
RSPO4Q2I0M5 XRCC6P2-201ENST00000457831 1822 ntBASIC7.28□□□□□ -1.24
RSPO4Q2I0M5 ANKRD30A-205ENST00000611781 4474 ntAPPRIS ALT2 TSL 5 BASIC7.28□□□□□ -1.24
RSPO4Q2I0M5 BTN2A1-201ENST00000312541 2920 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
RSPO4Q2I0M5 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC7.28□□□□□ -1.24
RSPO4Q2I0M5 TAF1-204ENST00000423759 7722 ntAPPRIS ALT2 TSL 5 BASIC7.28□□□□□ -1.24
RSPO4Q2I0M5 MGAT4A-202ENST00000393487 8382 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
RSPO4Q2I0M5 KDM5A-201ENST00000399788 10763 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
RSPO4Q2I0M5 KLHL8-208ENST00000512111 3245 ntAPPRIS P1 TSL 2 BASIC7.28□□□□□ -1.24
RSPO4Q2I0M5 SF3A3P1-201ENST00000446317 1477 ntBASIC7.28□□□□□ -1.24
RSPO4Q2I0M5 ANKS1B-215ENST00000549493 3328 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
RSPO4Q2I0M5 ZNF670-ZNF695-202ENST00000474541 2751 ntAPPRIS ALT2 TSL 2 BASIC7.28□□□□□ -1.24
RSPO4Q2I0M5 FPR3-202ENST00000595991 2222 ntAPPRIS P1 TSL 4 BASIC7.28□□□□□ -1.24
RSPO4Q2I0M5 AFF1-211ENST00000544085 3644 ntAPPRIS ALT2 TSL 5 BASIC7.28□□□□□ -1.24
RSPO4Q2I0M5 ATG4A-203ENST00000372232 2315 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
RSPO4Q2I0M5 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
RSPO4Q2I0M5 ERC1-203ENST00000360905 5789 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
RSPO4Q2I0M5 DGKB-205ENST00000406247 3257 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
RSPO4Q2I0M5 ARHGEF9-234ENST00000637557 4775 ntTSL 5 BASIC7.28□□□□□ -1.24
RSPO4Q2I0M5 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
RSPO4Q2I0M5 LYRM4-201ENST00000330636 7312 ntAPPRIS P3 TSL 1 (best) BASIC7.28□□□□□ -1.24
RSPO4Q2I0M5 CLDN12-201ENST00000287916 3565 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
RSPO4Q2I0M5 PTPDC1-204ENST00000620992 4437 ntAPPRIS ALT2 TSL 2 BASIC7.28□□□□□ -1.24
RSPO4Q2I0M5 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
RSPO4Q2I0M5 MCM8-205ENST00000610722 7486 ntAPPRIS P4 TSL 1 (best) BASIC7.27□□□□□ -1.24
RSPO4Q2I0M5 NEK2P2-201ENST00000438441 1338 ntBASIC7.27□□□□□ -1.24
RSPO4Q2I0M5 USP32P1-202ENST00000393005 3846 ntTSL 5 BASIC7.27□□□□□ -1.25
RSPO4Q2I0M5 CPSF7-206ENST00000448745 1749 ntAPPRIS ALT1 TSL 5 BASIC7.27□□□□□ -1.25
RSPO4Q2I0M5 AC087359.1-201ENST00000508335 1740 ntBASIC7.27□□□□□ -1.25
RSPO4Q2I0M5 AC131392.2-201ENST00000505635 4332 ntBASIC7.27□□□□□ -1.25
RSPO4Q2I0M5 EHF-201ENST00000257831 3150 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
RSPO4Q2I0M5 MID1-204ENST00000380782 3352 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
RSPO4Q2I0M5 PIWIL2-204ENST00000521356 3488 ntTSL 2 BASIC7.27□□□□□ -1.25
RSPO4Q2I0M5 ALDH1A1-201ENST00000297785 2107 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
RSPO4Q2I0M5 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
RSPO4Q2I0M5 THAP12P6-201ENST00000431978 2310 ntBASIC7.27□□□□□ -1.25
RSPO4Q2I0M5 AOAH-208ENST00000612871 2336 ntAPPRIS ALT2 TSL 2 BASIC7.27□□□□□ -1.25
RSPO4Q2I0M5 LRP1-201ENST00000243077 14897 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
RSPO4Q2I0M5 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
RSPO4Q2I0M5 RIT2-201ENST00000326695 1092 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
RSPO4Q2I0M5 Y_RNA.38-201ENST00000362617 102 ntBASIC7.27□□□□□ -1.25
RSPO4Q2I0M5 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC7.27□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms