RNA–Protein interactions for RNA: ENST00000589259.1

LINC01180-201, Transcript of long intergenic non-protein coding RNA 1180, humanhuman

TSL 1 (best) BASIC

Gene LINC01180, Length 2,025 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01180-201ENST00000589259 NISCHQ9Y2I1 1504 aa18.78■□□□□ 0.6
LINC01180-201ENST00000589259 CHIC1Q5VXU3 224 aa18.28■□□□□ 0.52
LINC01180-201ENST00000589259 AEBP2Q6ZN18 517 aaPredicted RBP17.39■□□□□ 0.37
LINC01180-201ENST00000589259 SLC24A1O60721 1099 aa16.4■□□□□ 0.22
LINC01180-201ENST00000589259 PHF23Q9BUL5 403 aaPredicted RBP16.39■□□□□ 0.21
LINC01180-201ENST00000589259 EHMT2Q96KQ7 1210 aa16.31■□□□□ 0.2
LINC01180-201ENST00000589259 CCDC180Q9P1Z9 1646 aa16.3■□□□□ 0.2
LINC01180-201ENST00000589259 ZCCHC6Q5VYS8 1495 aaKnown RBP15.81■□□□□ 0.12
LINC01180-201ENST00000589259 DCAF1Q9Y4B6 1507 aa15.57■□□□□ 0.08
LINC01180-201ENST00000589259 PLPPR3Q6T4P5 718 aa15.5■□□□□ 0.07
LINC01180-201ENST00000589259 KCNA4P22459 653 aa15.4■□□□□ 0.06
LINC01180-201ENST00000589259 DCAF8L2P0C7V8 631 aa15.38■□□□□ 0.05
LINC01180-201ENST00000589259 CSRNP3Q8WYN3 585 aa15.36■□□□□ 0.05
LINC01180-201ENST00000589259 MYO15BQ96JP2 1530 aa15.35■□□□□ 0.05
LINC01180-201ENST00000589259 RTN4Q9NQC3 1192 aaKnown RBP15.33■□□□□ 0.04
LINC01180-201ENST00000589259 SHROOM4Q9ULL8 1493 aa15.32■□□□□ 0.04
LINC01180-201ENST00000589259 ABCC9O60706 1549 aa15.27■□□□□ 0.04
LINC01180-201ENST00000589259 NACADO15069 1562 aa15.17■□□□□ 0.02
LINC01180-201ENST00000589259 AMER1Q5JTC6 1135 aaPredicted RBP15.07■□□□□ 0
LINC01180-201ENST00000589259 RB1CC1Q8TDY2 1594 aa14.99□□□□□ -0.01
LINC01180-201ENST00000589259 SCRIBQ14160 1630 aa14.96□□□□□ -0.01
LINC01180-201ENST00000589259 SLC4A1APQ9BWU0 796 aaKnown RBP14.82□□□□□ -0.04
LINC01180-201ENST00000589259 SUPT5HO00267 1087 aaKnown RBP14.82□□□□□ -0.04
LINC01180-201ENST00000589259 NCBP3Q53F19 620 aaKnown RBP14.68□□□□□ -0.06
LINC01180-201ENST00000589259 ADRA2BP18089 450 aa14.66□□□□□ -0.06
LINC01180-201ENST00000589259 UNC13AQ9UPW8 1703 aa14.63□□□□□ -0.07
LINC01180-201ENST00000589259 RSF1Q96T23 1441 aaPredicted RBP14.62□□□□□ -0.07
LINC01180-201ENST00000589259 CECR2Q9BXF3 1484 aa14.56□□□□□ -0.08
LINC01180-201ENST00000589259 BICRAQ9NZM4 1560 aa14.54□□□□□ -0.08
LINC01180-201ENST00000589259 MROH2BQ7Z745 1585 aa14.49□□□□□ -0.09
LINC01180-201ENST00000589259 BAZ1AQ9NRL2 1556 aaPredicted RBP14.49□□□□□ -0.09
LINC01180-201ENST00000589259 POTEDQ86YR6 584 aa14.46□□□□□ -0.09
LINC01180-201ENST00000589259 SENP3Q9H4L4 574 aaPredicted RBP14.45□□□□□ -0.1
LINC01180-201ENST00000589259 PABPN1Q86U42 306 aaKnown RBP eCLIP14.42□□□□□ -0.1
LINC01180-201ENST00000589259 SMARCA4P51532 1647 aa14.39□□□□□ -0.11
LINC01180-201ENST00000589259 WIZO95785 1651 aa14.34□□□□□ -0.11
LINC01180-201ENST00000589259 DAXXQ9UER7 740 aaPredicted RBP14.34□□□□□ -0.11
LINC01180-201ENST00000589259 PRKCSHP14314 528 aaPredicted RBP14.33□□□□□ -0.12
LINC01180-201ENST00000589259 ZBTB22O15209 634 aa14.28□□□□□ -0.12
LINC01180-201ENST00000589259 PEG3Q9GZU2 1588 aa14.25□□□□□ -0.13
LINC01180-201ENST00000589259 TOP2AP11388 1531 aaKnown RBP14.24□□□□□ -0.13
LINC01180-201ENST00000589259 ATAD2BQ9ULI0 1458 aa14.15□□□□□ -0.15
LINC01180-201ENST00000589259 SMARCA2P51531 1590 aa14.13□□□□□ -0.15
LINC01180-201ENST00000589259 CCDC88BA6NC98 1476 aa14.1□□□□□ -0.15
LINC01180-201ENST00000589259 EIF4G1Q04637 1599 aaKnown RBP14.09□□□□□ -0.15
LINC01180-201ENST00000589259 BAZ1BQ9UIG0 1483 aaKnown RBP14.05□□□□□ -0.16
LINC01180-201ENST00000589259 NCAPD3P42695 1498 aa14.03□□□□□ -0.16
LINC01180-201ENST00000589259 PPP6R1Q9UPN7 881 aa14.02□□□□□ -0.17
LINC01180-201ENST00000589259 TAOK2Q9UL54 1235 aa14.01□□□□□ -0.17
LINC01180-201ENST00000589259 HMGXB3Q12766 1538 aa14□□□□□ -0.17
LINC01180-201ENST00000589259 TRIM41Q8WV44 630 aa13.95□□□□□ -0.18
LINC01180-201ENST00000589259 BCANQ96GW7 911 aa13.93□□□□□ -0.18
LINC01180-201ENST00000589259 PLCB2Q00722 1185 aa13.88□□□□□ -0.19
LINC01180-201ENST00000589259 PPP4R3CPQ6ZMV5 832 aa13.88□□□□□ -0.19
LINC01180-201ENST00000589259 TIMELESSQ9UNS1 1208 aa13.87□□□□□ -0.19
LINC01180-201ENST00000589259 NPM3O75607 178 aaKnown RBP13.86□□□□□ -0.19
LINC01180-201ENST00000589259 ARXQ96QS3 562 aa13.84□□□□□ -0.19
LINC01180-201ENST00000589259 CC2D2AQ9P2K1 1620 aa13.83□□□□□ -0.2
LINC01180-201ENST00000589259 ABCC8Q09428 1581 aa13.8□□□□□ -0.2
LINC01180-201ENST00000589259 TPRNQ4KMQ1 711 aa13.77□□□□□ -0.21
LINC01180-201ENST00000589259 FKBP8Q14318 412 aa13.76□□□□□ -0.21
LINC01180-201ENST00000589259 WRNQ14191 1432 aaPredicted RBP eCLIP13.74□□□□□ -0.21
LINC01180-201ENST00000589259 CFTRP13569 1480 aa13.74□□□□□ -0.21
LINC01180-201ENST00000589259 LOC105371045A0A1W2PR82 267 aa13.72□□□□□ -0.21
LINC01180-201ENST00000589259 HAP1P54257 671 aaPredicted RBP13.71□□□□□ -0.21
LINC01180-201ENST00000589259 TULP1O00294 542 aaPredicted RBP13.7□□□□□ -0.22
LINC01180-201ENST00000589259 SYNJ1O43426 1573 aa13.66□□□□□ -0.22
LINC01180-201ENST00000589259 CADPSQ9ULU8 1353 aa13.66□□□□□ -0.22
LINC01180-201ENST00000589259 FAM9AQ8IZU1 332 aaPredicted RBP13.65□□□□□ -0.22
LINC01180-201ENST00000589259 EEA1Q15075 1411 aa13.64□□□□□ -0.23
LINC01180-201ENST00000589259 TOP2BQ02880 1626 aa13.62□□□□□ -0.23
LINC01180-201ENST00000589259 PRDM2Q13029 1718 aa13.6□□□□□ -0.23
LINC01180-201ENST00000589259 SOGA1O94964 1423 aa13.6□□□□□ -0.23
LINC01180-201ENST00000589259 BIVM-ERCC5R4GMW8 1640 aa13.59□□□□□ -0.23
LINC01180-201ENST00000589259 FOXD4L1Q9NU39 408 aa13.59□□□□□ -0.23
LINC01180-201ENST00000589259 CUX1P39880 1505 aa13.54□□□□□ -0.24
LINC01180-201ENST00000589259 RUSC2Q8N2Y8 1516 aa13.52□□□□□ -0.24
LINC01180-201ENST00000589259 FOXD1Q16676 465 aa13.51□□□□□ -0.25
LINC01180-201ENST00000589259 LAMC3Q9Y6N6 1575 aa13.5□□□□□ -0.25
LINC01180-201ENST00000589259 FANCD2Q9BXW9 1451 aa13.49□□□□□ -0.25
LINC01180-201ENST00000589259 NESP48681 1621 aa13.45□□□□□ -0.26
LINC01180-201ENST00000589259 HOMEZQ8IX15 550 aa13.44□□□□□ -0.26
LINC01180-201ENST00000589259 DNAJC5BQ9UF47 199 aa13.44□□□□□ -0.26
LINC01180-201ENST00000589259 VSIG10Q8N0Z9 540 aa13.44□□□□□ -0.26
LINC01180-201ENST00000589259 TNIKQ9UKE5 1360 aa13.43□□□□□ -0.26
LINC01180-201ENST00000589259 GOLGA3Q08378 1498 aa13.43□□□□□ -0.26
LINC01180-201ENST00000589259 CEP164Q9UPV0 1460 aa13.43□□□□□ -0.26
LINC01180-201ENST00000589259 KIF21BO75037 1637 aa13.42□□□□□ -0.26
LINC01180-201ENST00000589259 GTF3C3Q9Y5Q9 886 aa13.4□□□□□ -0.26
LINC01180-201ENST00000589259 PDS5BQ9NTI5 1447 aa13.4□□□□□ -0.26
LINC01180-201ENST00000589259 KIF27Q86VH2 1401 aa13.39□□□□□ -0.27
LINC01180-201ENST00000589259 DNMBPQ6XZF7 1577 aa13.38□□□□□ -0.27
LINC01180-201ENST00000589259 FGD5Q6ZNL6 1462 aa13.37□□□□□ -0.27
LINC01180-201ENST00000589259 TOPBP1Q92547 1522 aa13.36□□□□□ -0.27
LINC01180-201ENST00000589259 PRXQ9BXM0 1461 aa13.35□□□□□ -0.27
LINC01180-201ENST00000589259 CEP162Q5TB80 1403 aa13.34□□□□□ -0.27
LINC01180-201ENST00000589259 ERICH3Q5RHP9 1530 aa13.33□□□□□ -0.28
LINC01180-201ENST00000589259 UBTFP17480 764 aaKnown RBP13.32□□□□□ -0.28
LINC01180-201ENST00000589259 RAPGEF2Q9Y4G8 1499 aa13.32□□□□□ -0.28
LINC01180-201ENST00000589259 URB2Q14146 1524 aaKnown RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms