RNA–Protein interactions for RNA: ENST00000399788.6

KDM5A-201, Transcript of lysine demethylase 5A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDM5A, Length 10,763 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5A-201ENST00000399788 DCAF8L2P0C7V8 631 aa14.48□□□□□ -0.09
KDM5A-201ENST00000399788 SUPT5HO00267 1087 aaKnown RBP13.29□□□□□ -0.28
KDM5A-201ENST00000399788 FAM9AQ8IZU1 332 aaPredicted RBP13.29□□□□□ -0.28
KDM5A-201ENST00000399788 EHMT2Q96KQ7 1210 aa13.22□□□□□ -0.29
KDM5A-201ENST00000399788 PELP1Q8IZL8 1130 aaKnown RBP13.2□□□□□ -0.3
KDM5A-201ENST00000399788 APLP2Q06481 763 aa13.14□□□□□ -0.31
KDM5A-201ENST00000399788 SHROOM4Q9ULL8 1493 aa12.91□□□□□ -0.34
KDM5A-201ENST00000399788 ATP1B4Q9UN42 357 aaPredicted RBP12.78□□□□□ -0.36
KDM5A-201ENST00000399788 TTBK1Q5TCY1 1321 aaPredicted RBP12.74□□□□□ -0.37
KDM5A-201ENST00000399788 RANGAP1P46060 587 aaPredicted RBP12.71□□□□□ -0.37
KDM5A-201ENST00000399788 ERICH6Q7L0X2 663 aa12.71□□□□□ -0.38
KDM5A-201ENST00000399788 CCER1Q8TC90 406 aaPredicted RBP12.65□□□□□ -0.38
KDM5A-201ENST00000399788 MYT1LQ9UL68 1186 aa12.57□□□□□ -0.4
KDM5A-201ENST00000399788 PCGF6Q9BYE7 350 aa12.48□□□□□ -0.41
KDM5A-201ENST00000399788 NISCHQ9Y2I1 1504 aa12.43□□□□□ -0.42
KDM5A-201ENST00000399788 UBTFP17480 764 aaKnown RBP12.38□□□□□ -0.43
KDM5A-201ENST00000399788 NEFLP07196 543 aa12.37□□□□□ -0.43
KDM5A-201ENST00000399788 CENPBP07199 599 aaPredicted RBP12.35□□□□□ -0.43
KDM5A-201ENST00000399788 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.33□□□□□ -0.44
KDM5A-201ENST00000399788 HNRNPUL2Q1KMD3 747 aaKnown RBP12.33□□□□□ -0.44
KDM5A-201ENST00000399788 CHIC1Q5VXU3 224 aa12.33□□□□□ -0.44
KDM5A-201ENST00000399788 TRIM41Q8WV44 630 aa12.29□□□□□ -0.44
KDM5A-201ENST00000399788 POLR3GLQ9BT43 218 aa12.25□□□□□ -0.45
KDM5A-201ENST00000399788 DAXXQ9UER7 740 aaPredicted RBP12.25□□□□□ -0.45
KDM5A-201ENST00000399788 SLC4A1APQ9BWU0 796 aaKnown RBP12.23□□□□□ -0.45
KDM5A-201ENST00000399788 ZEB1P37275 1124 aaPredicted RBP12.16□□□□□ -0.46
KDM5A-201ENST00000399788 YTHDC1Q96MU7 727 aaKnown RBP12.11□□□□□ -0.47
KDM5A-201ENST00000399788 CNGB1Q14028 1251 aaPredicted RBP12.09□□□□□ -0.47
KDM5A-201ENST00000399788 ITGAEP38570 1179 aa12.07□□□□□ -0.48
KDM5A-201ENST00000399788 MYT1Q01538 1121 aa12.05□□□□□ -0.48
KDM5A-201ENST00000399788 PPARGC1BQ86YN6 1023 aaKnown RBP11.97□□□□□ -0.49
KDM5A-201ENST00000399788 CLSPNQ9HAW4 1339 aa11.96□□□□□ -0.49
KDM5A-201ENST00000399788 SLC24A1O60721 1099 aa11.93□□□□□ -0.5
KDM5A-201ENST00000399788 ZNF316A6NFI3 1004 aaPredicted RBP11.88□□□□□ -0.51
KDM5A-201ENST00000399788 BCANQ96GW7 911 aa11.88□□□□□ -0.51
KDM5A-201ENST00000399788 ZBTB47Q9UFB7 747 aaPredicted RBP11.86□□□□□ -0.51
KDM5A-201ENST00000399788 FBLN2P98095 1184 aa11.74□□□□□ -0.53
KDM5A-201ENST00000399788 TRIM52Q96A61 297 aa11.74□□□□□ -0.53
KDM5A-201ENST00000399788 BCL11AQ9H165 835 aa11.74□□□□□ -0.53
KDM5A-201ENST00000399788 NEFMP07197 916 aa11.71□□□□□ -0.53
KDM5A-201ENST00000399788 FAM50AQ14320 339 aaKnown RBP11.71□□□□□ -0.54
KDM5A-201ENST00000399788 RTL5Q5HYW3 569 aaPredicted RBP11.7□□□□□ -0.54
KDM5A-201ENST00000399788 ESF1Q9H501 851 aaKnown RBP11.69□□□□□ -0.54
KDM5A-201ENST00000399788 PLPPR3Q6T4P5 718 aa11.65□□□□□ -0.54
KDM5A-201ENST00000399788 ZNF326Q5BKZ1 582 aaKnown RBP11.64□□□□□ -0.55
KDM5A-201ENST00000399788 TRIM26Q12899 539 aaPredicted RBP11.62□□□□□ -0.55
KDM5A-201ENST00000399788 CANXP27824 592 aaKnown RBP11.61□□□□□ -0.55
KDM5A-201ENST00000399788 NEUROD1Q13562 356 aa11.56□□□□□ -0.56
KDM5A-201ENST00000399788 STAG3Q9UJ98 1225 aa11.56□□□□□ -0.56
KDM5A-201ENST00000399788 A0A0G2JS52 829 aa11.48□□□□□ -0.57
KDM5A-201ENST00000399788 PABPN1Q86U42 306 aaKnown RBP eCLIP11.48□□□□□ -0.57
KDM5A-201ENST00000399788 SCAF1Q9H7N4 1312 aaKnown RBP11.47□□□□□ -0.57
KDM5A-201ENST00000399788 NPM1P06748 294 aaKnown RBP eCLIP11.47□□□□□ -0.57
KDM5A-201ENST00000399788 CHGAP10645 457 aaKnown RBP11.45□□□□□ -0.58
KDM5A-201ENST00000399788 HRCP23327 699 aa11.45□□□□□ -0.58
KDM5A-201ENST00000399788 ARID3CA6NKF2 412 aa11.43□□□□□ -0.58
KDM5A-201ENST00000399788 ANP32CO43423 234 aa11.42□□□□□ -0.58
KDM5A-201ENST00000399788 ZNF777Q9ULD5 760 aaPredicted RBP11.42□□□□□ -0.58
KDM5A-201ENST00000399788 LOC105371045A0A1W2PR82 267 aa11.41□□□□□ -0.58
KDM5A-201ENST00000399788 NPM2Q86SE8 214 aaKnown RBP11.39□□□□□ -0.59
KDM5A-201ENST00000399788 CDK11AQ9UQ88 783 aaPredicted RBP11.36□□□□□ -0.59
KDM5A-201ENST00000399788 CDK11BP21127 795 aaKnown RBP11.35□□□□□ -0.59
KDM5A-201ENST00000399788 HSP90AA1P07900 732 aaKnown RBP11.35□□□□□ -0.59
KDM5A-201ENST00000399788 DIEXFQ68CQ4 756 aaKnown RBP11.33□□□□□ -0.59
KDM5A-201ENST00000399788 P3H3Q8IVL6 736 aa11.32□□□□□ -0.6
KDM5A-201ENST00000399788 ANP32BQ92688 251 aaKnown RBP11.32□□□□□ -0.6
KDM5A-201ENST00000399788 ABCC9O60706 1549 aa11.3□□□□□ -0.6
KDM5A-201ENST00000399788 PLEKHG5O94827 1062 aa11.29□□□□□ -0.6
KDM5A-201ENST00000399788 C14orf37Q86TY3 774 aa11.27□□□□□ -0.61
KDM5A-201ENST00000399788 ZBTB7CA1YPR0 619 aa11.27□□□□□ -0.61
KDM5A-201ENST00000399788 HAP1P54257 671 aaPredicted RBP11.26□□□□□ -0.61
KDM5A-201ENST00000399788 UPF2Q9HAU5 1272 aaKnown RBP11.23□□□□□ -0.61
KDM5A-201ENST00000399788 ANP32AP39687 249 aaKnown RBP11.21□□□□□ -0.61
KDM5A-201ENST00000399788 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.2□□□□□ -0.629e-7■■□□□ 12.7
KDM5A-201ENST00000399788 ARXQ96QS3 562 aa11.18□□□□□ -0.62
KDM5A-201ENST00000399788 TULP1O00294 542 aaPredicted RBP11.16□□□□□ -0.62
KDM5A-201ENST00000399788 PPP1R15AO75807 674 aaPredicted RBP11.15□□□□□ -0.63
KDM5A-201ENST00000399788 NPHP1O15259 732 aa11.14□□□□□ -0.63
KDM5A-201ENST00000399788 ARID4BQ4LE39 1312 aaPredicted RBP11.13□□□□□ -0.63
KDM5A-201ENST00000399788 SENP3Q9H4L4 574 aaPredicted RBP11.12□□□□□ -0.63
KDM5A-201ENST00000399788 SALL2Q9Y467 1007 aaPredicted RBP11.12□□□□□ -0.63
KDM5A-201ENST00000399788 MYH16Q9H6N6 1097 aa11.11□□□□□ -0.63
KDM5A-201ENST00000399788 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.11□□□□□ -0.63
KDM5A-201ENST00000399788 WDR43Q15061 677 aaKnown RBP eCLIP11.09□□□□□ -0.63
KDM5A-201ENST00000399788 TSPY4P0CV99 314 aa11.06□□□□□ -0.64
KDM5A-201ENST00000399788 TSPY10P0CW01 314 aa11.06□□□□□ -0.64
KDM5A-201ENST00000399788 TONSLQ96HA7 1378 aa11.05□□□□□ -0.64
KDM5A-201ENST00000399788 TMC1Q8TDI8 760 aa11.04□□□□□ -0.64
KDM5A-201ENST00000399788 LMOD2Q6P5Q4 547 aa11.03□□□□□ -0.64
KDM5A-201ENST00000399788 KDM2AQ9Y2K7 1162 aa11.03□□□□□ -0.64
KDM5A-201ENST00000399788 EIF5BO60841 1220 aaKnown RBP11.02□□□□□ -0.64
KDM5A-201ENST00000399788 FAM9BQ8IZU0 186 aa11.02□□□□□ -0.65
KDM5A-201ENST00000399788 CHMP7Q8WUX9 453 aaPredicted RBP11.02□□□□□ -0.65
KDM5A-201ENST00000399788 NCBP3Q53F19 620 aaKnown RBP11.02□□□□□ -0.65
KDM5A-201ENST00000399788 CHIC2Q9UKJ5 165 aa10.99□□□□□ -0.65
KDM5A-201ENST00000399788 TRHP20396 242 aaPredicted RBP10.99□□□□□ -0.65
KDM5A-201ENST00000399788 ZRSR1Q15695 479 aaKnown RBP10.98□□□□□ -0.65
KDM5A-201ENST00000399788 GTF3C3Q9Y5Q9 886 aa10.98□□□□□ -0.65
KDM5A-201ENST00000399788 KCNH8Q96L42 1107 aa10.98□□□□□ -0.65
KDM5A-201ENST00000399788 NCLP19338 710 aaKnown RBP10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms