RNA–Protein interactions for RNA: ENST00000375726.6

CASP12-201, Transcript of caspase 12 (gene/pseudogene), humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene CASP12, Length 1,306 nt, Biotype polymorphic pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP12-201ENST00000375726 AEBP2Q6ZN18 517 aaPredicted RBP22.59■■□□□ 1.21
CASP12-201ENST00000375726 CHIC1Q5VXU3 224 aa21.84■■□□□ 1.09
CASP12-201ENST00000375726 PHF23Q9BUL5 403 aaPredicted RBP19.2■□□□□ 0.66
CASP12-201ENST00000375726 SENP3Q9H4L4 574 aaPredicted RBP19.2■□□□□ 0.66
CASP12-201ENST00000375726 NISCHQ9Y2I1 1504 aa17.96■□□□□ 0.47
CASP12-201ENST00000375726 FOXD1Q16676 465 aa17.84■□□□□ 0.45
CASP12-201ENST00000375726 PLPPR3Q6T4P5 718 aa17.63■□□□□ 0.41
CASP12-201ENST00000375726 PPP6R1Q9UPN7 881 aa17■□□□□ 0.31
CASP12-201ENST00000375726 ADRA2BP18089 450 aa16.96■□□□□ 0.31
CASP12-201ENST00000375726 PIAS4Q8N2W9 510 aaPredicted RBP16.77■□□□□ 0.28
CASP12-201ENST00000375726 MSH5O43196 834 aa16.53■□□□□ 0.24
CASP12-201ENST00000375726 CCDC180Q9P1Z9 1646 aa15.96■□□□□ 0.15
CASP12-201ENST00000375726 PPP4R3CPQ6ZMV5 832 aa15.52■□□□□ 0.08
CASP12-201ENST00000375726 SCAF1Q9H7N4 1312 aaKnown RBP15.51■□□□□ 0.07
CASP12-201ENST00000375726 MAPK8IP2Q13387 824 aaPredicted RBP15.46■□□□□ 0.07
CASP12-201ENST00000375726 POTEDQ86YR6 584 aa15.44■□□□□ 0.06
CASP12-201ENST00000375726 DMRT2Q9Y5R5 561 aa15.29■□□□□ 0.04
CASP12-201ENST00000375726 ABCC9O60706 1549 aa15.14■□□□□ 0.01
CASP12-201ENST00000375726 CNKSR2Q8WXI2 1034 aa15.13■□□□□ 0.01
CASP12-201ENST00000375726 ZCCHC6Q5VYS8 1495 aaKnown RBP15.07■□□□□ 0
CASP12-201ENST00000375726 NCBP3Q53F19 620 aaKnown RBP15.03■□□□□ -0
CASP12-201ENST00000375726 DCAF1Q9Y4B6 1507 aa14.92□□□□□ -0.02
CASP12-201ENST00000375726 KCNA4P22459 653 aa14.91□□□□□ -0.02
CASP12-201ENST00000375726 HOXD11P31277 338 aaPredicted RBP14.9□□□□□ -0.02
CASP12-201ENST00000375726 RNF216Q9NWF9 866 aaPredicted RBP14.89□□□□□ -0.03
CASP12-201ENST00000375726 NACADO15069 1562 aa14.85□□□□□ -0.03
CASP12-201ENST00000375726 MYO15BQ96JP2 1530 aa14.84□□□□□ -0.03
CASP12-201ENST00000375726 NPM3O75607 178 aaKnown RBP14.83□□□□□ -0.04
CASP12-201ENST00000375726 DCAF8L2P0C7V8 631 aa14.82□□□□□ -0.04
CASP12-201ENST00000375726 RB1CC1Q8TDY2 1594 aa14.82□□□□□ -0.04
CASP12-201ENST00000375726 DCAF8L1A6NGE4 600 aa14.62□□□□□ -0.07
CASP12-201ENST00000375726 SCRIBQ14160 1630 aa14.54□□□□□ -0.08
CASP12-201ENST00000375726 UNC13AQ9UPW8 1703 aa14.48□□□□□ -0.09
CASP12-201ENST00000375726 DNAJC5BQ9UF47 199 aa14.44□□□□□ -0.1
CASP12-201ENST00000375726 SHROOM4Q9ULL8 1493 aa14.39□□□□□ -0.11
CASP12-201ENST00000375726 BICRAQ9NZM4 1560 aa14.24□□□□□ -0.13
CASP12-201ENST00000375726 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.17□□□□□ -0.14
CASP12-201ENST00000375726 SLC4A1APQ9BWU0 796 aaKnown RBP14.15□□□□□ -0.14
CASP12-201ENST00000375726 RNF39Q9H2S5 420 aa14.15□□□□□ -0.14
CASP12-201ENST00000375726 PABPN1Q86U42 306 aaKnown RBP eCLIP14.12□□□□□ -0.15
CASP12-201ENST00000375726 SLC4A2P04920 1241 aa14.07□□□□□ -0.16
CASP12-201ENST00000375726 BAZ1AQ9NRL2 1556 aaPredicted RBP13.97□□□□□ -0.17
CASP12-201ENST00000375726 C1QBPQ07021 282 aaKnown RBP13.96□□□□□ -0.17
CASP12-201ENST00000375726 CACNB1Q02641 598 aaPredicted RBP13.93□□□□□ -0.18
CASP12-201ENST00000375726 U3KPZ7 1027 aaPredicted RBP13.93□□□□□ -0.18
CASP12-201ENST00000375726 SMARCA4P51532 1647 aa13.93□□□□□ -0.18
CASP12-201ENST00000375726 CECR2Q9BXF3 1484 aa13.89□□□□□ -0.19
CASP12-201ENST00000375726 EIF4G1Q04637 1599 aaKnown RBP13.89□□□□□ -0.19
CASP12-201ENST00000375726 MROH2BQ7Z745 1585 aa13.83□□□□□ -0.2
CASP12-201ENST00000375726 SMARCA2P51531 1590 aa13.78□□□□□ -0.2
CASP12-201ENST00000375726 FOXD4L1Q9NU39 408 aa13.78□□□□□ -0.2
CASP12-201ENST00000375726 RSF1Q96T23 1441 aaPredicted RBP13.78□□□□□ -0.2
CASP12-201ENST00000375726 PEG3Q9GZU2 1588 aa13.76□□□□□ -0.21
CASP12-201ENST00000375726 WIZO95785 1651 aa13.75□□□□□ -0.21
CASP12-201ENST00000375726 CC2D2AQ9P2K1 1620 aa13.74□□□□□ -0.21
CASP12-201ENST00000375726 ZBTB22O15209 634 aa13.72□□□□□ -0.21
CASP12-201ENST00000375726 SUPT5HO00267 1087 aaKnown RBP13.7□□□□□ -0.22
CASP12-201ENST00000375726 MYCNP04198 464 aaPredicted RBP13.7□□□□□ -0.22
CASP12-201ENST00000375726 ATAD2BQ9ULI0 1458 aa13.68□□□□□ -0.22
CASP12-201ENST00000375726 HMGXB3Q12766 1538 aa13.68□□□□□ -0.22
CASP12-201ENST00000375726 BAZ1BQ9UIG0 1483 aaKnown RBP13.67□□□□□ -0.22
CASP12-201ENST00000375726 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.66□□□□□ -0.22
CASP12-201ENST00000375726 HNRNPUL2Q1KMD3 747 aaKnown RBP13.66□□□□□ -0.22
CASP12-201ENST00000375726 TOP2AP11388 1531 aaKnown RBP13.66□□□□□ -0.22
CASP12-201ENST00000375726 SAMD1Q6SPF0 538 aaPredicted RBP13.62□□□□□ -0.23
CASP12-201ENST00000375726 NCAPD3P42695 1498 aa13.61□□□□□ -0.23
CASP12-201ENST00000375726 SPINK5Q9NQ38 1064 aaPredicted RBP13.61□□□□□ -0.23
CASP12-201ENST00000375726 APLP2Q06481 763 aa13.58□□□□□ -0.24
CASP12-201ENST00000375726 CAPN15O75808 1086 aa13.55□□□□□ -0.24
CASP12-201ENST00000375726 EHMT2Q96KQ7 1210 aa13.49□□□□□ -0.25
CASP12-201ENST00000375726 CSRNP3Q8WYN3 585 aa13.45□□□□□ -0.26
CASP12-201ENST00000375726 TRHP20396 242 aaPredicted RBP13.43□□□□□ -0.26
CASP12-201ENST00000375726 ZNF219Q9P2Y4 722 aaPredicted RBP13.43□□□□□ -0.26
CASP12-201ENST00000375726 CCDC88BA6NC98 1476 aa13.4□□□□□ -0.26
CASP12-201ENST00000375726 DSG3P32926 999 aa13.39□□□□□ -0.27
CASP12-201ENST00000375726 PRDM2Q13029 1718 aa13.37□□□□□ -0.27
CASP12-201ENST00000375726 ATF5Q9Y2D1 282 aaPredicted RBP13.37□□□□□ -0.27
CASP12-201ENST00000375726 ATXN8OSP0DMR3 200 aa13.32□□□□□ -0.28
CASP12-201ENST00000375726 LAMC3Q9Y6N6 1575 aa13.3□□□□□ -0.28
CASP12-201ENST00000375726 ABCB7O75027 752 aa13.29□□□□□ -0.28
CASP12-201ENST00000375726 CFTRP13569 1480 aa13.24□□□□□ -0.29
CASP12-201ENST00000375726 DNAJC5Q9H3Z4 198 aa13.24□□□□□ -0.29
CASP12-201ENST00000375726 CADPSQ9ULU8 1353 aa13.22□□□□□ -0.29
CASP12-201ENST00000375726 POLA2Q14181 598 aa13.17□□□□□ -0.3
CASP12-201ENST00000375726 NESP48681 1621 aa13.17□□□□□ -0.3
CASP12-201ENST00000375726 PDS5BQ9NTI5 1447 aa13.16□□□□□ -0.3
CASP12-201ENST00000375726 KIF21AQ7Z4S6 1674 aa13.15□□□□□ -0.3
CASP12-201ENST00000375726 FANCD2Q9BXW9 1451 aa13.13□□□□□ -0.31
CASP12-201ENST00000375726 CEP164Q9UPV0 1460 aa13.13□□□□□ -0.31
CASP12-201ENST00000375726 ERCC6Q03468 1493 aa13.1□□□□□ -0.31
CASP12-201ENST00000375726 ABCC8Q09428 1581 aa13.08□□□□□ -0.32
CASP12-201ENST00000375726 WRNQ14191 1432 aaPredicted RBP eCLIP13.04□□□□□ -0.32
CASP12-201ENST00000375726 BIVM-ERCC5R4GMW8 1640 aa13.04□□□□□ -0.32
CASP12-201ENST00000375726 DNMBPQ6XZF7 1577 aa13.02□□□□□ -0.32
CASP12-201ENST00000375726 MRC2Q9UBG0 1479 aa13.02□□□□□ -0.33
CASP12-201ENST00000375726 TOP2BQ02880 1626 aa13.02□□□□□ -0.33
CASP12-201ENST00000375726 SYNJ1O43426 1573 aa13.01□□□□□ -0.33
CASP12-201ENST00000375726 THOC2Q8NI27 1593 aaKnown RBP12.99□□□□□ -0.33
CASP12-201ENST00000375726 CUX2O14529 1486 aa12.98□□□□□ -0.33
CASP12-201ENST00000375726 CUX1P39880 1505 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms