RNA–Protein interactions for RNA: ENST00000553615.5

FCF1-203, Transcript of FCF1, rRNA-processing protein, humanhuman

TSL 3 BASIC

Gene FCF1, Length 954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FCF1-203ENST00000553615 AEBP2Q6ZN18 517 aaPredicted RBP22.9■■□□□ 1.26
FCF1-203ENST00000553615 CHIC1Q5VXU3 224 aa22.47■■□□□ 1.19
FCF1-203ENST00000553615 PHF23Q9BUL5 403 aaPredicted RBP19.72■□□□□ 0.75
FCF1-203ENST00000553615 SENP3Q9H4L4 574 aaPredicted RBP19.5■□□□□ 0.71
FCF1-203ENST00000553615 PLPPR3Q6T4P5 718 aa18.3■□□□□ 0.52
FCF1-203ENST00000553615 FOXD1Q16676 465 aa18.05■□□□□ 0.48
FCF1-203ENST00000553615 ADRA2BP18089 450 aa17.39■□□□□ 0.37
FCF1-203ENST00000553615 PPP6R1Q9UPN7 881 aa17.38■□□□□ 0.37
FCF1-203ENST00000553615 PIAS4Q8N2W9 510 aaPredicted RBP17.06■□□□□ 0.32
FCF1-203ENST00000553615 MSH5O43196 834 aa16.68■□□□□ 0.26
FCF1-203ENST00000553615 POTEDQ86YR6 584 aa16.52■□□□□ 0.24
FCF1-203ENST00000553615 PPP4R3CPQ6ZMV5 832 aa16.11■□□□□ 0.17
FCF1-203ENST00000553615 SCAF1Q9H7N4 1312 aaKnown RBP16■□□□□ 0.15
FCF1-203ENST00000553615 KCNA4P22459 653 aa15.78■□□□□ 0.12
FCF1-203ENST00000553615 NCBP3Q53F19 620 aaKnown RBP15.76■□□□□ 0.11
FCF1-203ENST00000553615 MAPK8IP2Q13387 824 aaPredicted RBP15.75■□□□□ 0.11
FCF1-203ENST00000553615 CNKSR2Q8WXI2 1034 aa15.67■□□□□ 0.1
FCF1-203ENST00000553615 DMRT2Q9Y5R5 561 aa15.55■□□□□ 0.08
FCF1-203ENST00000553615 NPM3O75607 178 aaKnown RBP15.46■□□□□ 0.07
FCF1-203ENST00000553615 RNF216Q9NWF9 866 aaPredicted RBP15.34■□□□□ 0.05
FCF1-203ENST00000553615 HOXD11P31277 338 aaPredicted RBP15.25■□□□□ 0.03
FCF1-203ENST00000553615 SLC4A1APQ9BWU0 796 aaKnown RBP15.07■□□□□ 0
FCF1-203ENST00000553615 DNAJC5BQ9UF47 199 aa15.02■□□□□ -0
FCF1-203ENST00000553615 DCAF8L1A6NGE4 600 aa14.91□□□□□ -0.02
FCF1-203ENST00000553615 EHMT2Q96KQ7 1210 aa14.69□□□□□ -0.06
FCF1-203ENST00000553615 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.58□□□□□ -0.08
FCF1-203ENST00000553615 SLC4A2P04920 1241 aa14.56□□□□□ -0.08
FCF1-203ENST00000553615 FOXD4L1Q9NU39 408 aa14.54□□□□□ -0.08
FCF1-203ENST00000553615 ZBTB22O15209 634 aa14.49□□□□□ -0.09
FCF1-203ENST00000553615 CSRNP3Q8WYN3 585 aa14.47□□□□□ -0.09
FCF1-203ENST00000553615 MYCNP04198 464 aaPredicted RBP14.33□□□□□ -0.12
FCF1-203ENST00000553615 U3KPZ7 1027 aaPredicted RBP14.29□□□□□ -0.12
FCF1-203ENST00000553615 RNF39Q9H2S5 420 aa14.26□□□□□ -0.13
FCF1-203ENST00000553615 CACNB1Q02641 598 aaPredicted RBP14.22□□□□□ -0.13
FCF1-203ENST00000553615 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.21□□□□□ -0.13
FCF1-203ENST00000553615 HNRNPUL2Q1KMD3 747 aaKnown RBP14.21□□□□□ -0.13
FCF1-203ENST00000553615 SAMD1Q6SPF0 538 aaPredicted RBP14.15□□□□□ -0.14
FCF1-203ENST00000553615 C1QBPQ07021 282 aaKnown RBP14.13□□□□□ -0.15
FCF1-203ENST00000553615 APLP2Q06481 763 aa14.08□□□□□ -0.16
FCF1-203ENST00000553615 ATXN8OSP0DMR3 200 aa14.05□□□□□ -0.16
FCF1-203ENST00000553615 ATF5Q9Y2D1 282 aaPredicted RBP13.88□□□□□ -0.19
FCF1-203ENST00000553615 SPINK5Q9NQ38 1064 aaPredicted RBP13.87□□□□□ -0.19
FCF1-203ENST00000553615 CAPN15O75808 1086 aa13.86□□□□□ -0.19
FCF1-203ENST00000553615 ZNF219Q9P2Y4 722 aaPredicted RBP13.83□□□□□ -0.2
FCF1-203ENST00000553615 TRHP20396 242 aaPredicted RBP13.81□□□□□ -0.2
FCF1-203ENST00000553615 ABCB7O75027 752 aa13.59□□□□□ -0.23
FCF1-203ENST00000553615 POLA2Q14181 598 aa13.59□□□□□ -0.23
FCF1-203ENST00000553615 DSG3P32926 999 aa13.58□□□□□ -0.24
FCF1-203ENST00000553615 ZBTB12Q9Y330 459 aaPredicted RBP13.42□□□□□ -0.26
FCF1-203ENST00000553615 FBLN2P98095 1184 aa13.38□□□□□ -0.27
FCF1-203ENST00000553615 MKRN4PQ13434 485 aaPredicted RBP13.28□□□□□ -0.28
FCF1-203ENST00000553615 FKBP8Q14318 412 aa13.11□□□□□ -0.31
FCF1-203ENST00000553615 OSCARQ8IYS5 282 aa13.11□□□□□ -0.31
FCF1-203ENST00000553615 SPDYE4A6NLX3 237 aa13.06□□□□□ -0.32
FCF1-203ENST00000553615 SPDYE2BA6NHP3 402 aa13.03□□□□□ -0.32
FCF1-203ENST00000553615 SPDYE6P0CI01 402 aa13.03□□□□□ -0.32
FCF1-203ENST00000553615 SPDYE2Q495Y8 402 aa13.03□□□□□ -0.32
FCF1-203ENST00000553615 RBM42Q9BTD8 480 aaKnown RBP13.01□□□□□ -0.33
FCF1-203ENST00000553615 ZNF692Q9BU19 519 aaPredicted RBP12.99□□□□□ -0.33
FCF1-203ENST00000553615 SSUH2Q9Y2M2 353 aa12.9□□□□□ -0.34
FCF1-203ENST00000553615 POTEHQ6S545 545 aa12.88□□□□□ -0.35
FCF1-203ENST00000553615 AKT1S1Q96B36 256 aa12.83□□□□□ -0.36
FCF1-203ENST00000553615 PROM2Q8N271 834 aa12.82□□□□□ -0.36
FCF1-203ENST00000553615 PABPN1Q86U42 306 aaKnown RBP eCLIP12.8□□□□□ -0.36
FCF1-203ENST00000553615 FBXO3Q9UK99 471 aa12.69□□□□□ -0.38
FCF1-203ENST00000553615 REM2Q8IYK8 340 aaPredicted RBP12.68□□□□□ -0.38
FCF1-203ENST00000553615 STAG3Q9UJ98 1225 aa12.65□□□□□ -0.38
FCF1-203ENST00000553615 SPDYE1Q8NFV5 336 aaPredicted RBP12.64□□□□□ -0.39
FCF1-203ENST00000553615 PELP1Q8IZL8 1130 aaKnown RBP12.59□□□□□ -0.39
FCF1-203ENST00000553615 CLEC11AQ9Y240 323 aa12.57□□□□□ -0.4
FCF1-203ENST00000553615 PITPNM1O00562 1244 aa12.53□□□□□ -0.4
FCF1-203ENST00000553615 PRR29P0C7W0 189 aa12.48□□□□□ -0.41
FCF1-203ENST00000553615 MYT1Q01538 1121 aa12.47□□□□□ -0.41
FCF1-203ENST00000553615 VASPP50552 380 aaPredicted RBP12.46□□□□□ -0.41
FCF1-203ENST00000553615 CHRDL2Q6WN34 429 aa12.4□□□□□ -0.42
FCF1-203ENST00000553615 MIER1Q8N108 512 aa12.4□□□□□ -0.42
FCF1-203ENST00000553615 PLCD3Q8N3E9 789 aa12.4□□□□□ -0.42
FCF1-203ENST00000553615 PLEKHG5O94827 1062 aa12.39□□□□□ -0.43
FCF1-203ENST00000553615 FXR2P51116 673 aaKnown RBP eCLIP12.29□□□□□ -0.44
FCF1-203ENST00000553615 ZBTB47Q9UFB7 747 aaPredicted RBP12.29□□□□□ -0.44
FCF1-203ENST00000553615 IFNLR1Q8IU57 520 aaPredicted RBP12.28□□□□□ -0.44
FCF1-203ENST00000553615 KLHL34Q8N239 644 aa12.28□□□□□ -0.44
FCF1-203ENST00000553615 CREBZFQ9NS37 354 aa12.28□□□□□ -0.44
FCF1-203ENST00000553615 PRKAR2AP13861 404 aaKnown RBP12.24□□□□□ -0.45
FCF1-203ENST00000553615 PIP4P2Q8N4L2 257 aa12.24□□□□□ -0.45
FCF1-203ENST00000553615 CHADLQ6NUI6 762 aa12.23□□□□□ -0.45
FCF1-203ENST00000553615 SPOCK2Q92563 424 aa12.16□□□□□ -0.46
FCF1-203ENST00000553615 NPM1P06748 294 aaKnown RBP eCLIP12.15□□□□□ -0.46
FCF1-203ENST00000553615 MNX1P50219 401 aaPredicted RBP12.15□□□□□ -0.46
FCF1-203ENST00000553615 FARP1Q9Y4F1 1045 aaPredicted RBP12.13□□□□□ -0.47
FCF1-203ENST00000553615 AMER1Q5JTC6 1135 aaPredicted RBP12.07□□□□□ -0.48
FCF1-203ENST00000553615 NUBP1P53384 320 aa12.03□□□□□ -0.48
FCF1-203ENST00000553615 TTBK1Q5TCY1 1321 aaPredicted RBP12□□□□□ -0.49
FCF1-203ENST00000553615 FAM212AQ96EL1 285 aa11.99□□□□□ -0.49
FCF1-203ENST00000553615 RTN4Q9NQC3 1192 aaKnown RBP11.98□□□□□ -0.49
FCF1-203ENST00000553615 GSE1Q14687 1217 aa11.97□□□□□ -0.49
FCF1-203ENST00000553615 RASEFQ8IZ41 740 aa11.97□□□□□ -0.49
FCF1-203ENST00000553615 CIZ1Q9ULV3 898 aaPredicted RBP11.97□□□□□ -0.49
FCF1-203ENST00000553615 DCAF8Q5TAQ9 597 aa11.96□□□□□ -0.49
FCF1-203ENST00000553615 PAK3O75914 559 aaPredicted RBP11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 109.2 ms