RNA–Protein interactions for RNA: ENST00000438441.1

NEK2P2-201, Transcript of NEK2 pseudogene 2, humanhuman

BASIC

Gene NEK2P2, Length 1,338 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK2P2-201ENST00000438441 AEBP2Q6ZN18 517 aaPredicted RBP23.35■■□□□ 1.33
NEK2P2-201ENST00000438441 CHIC1Q5VXU3 224 aa22.5■■□□□ 1.19
NEK2P2-201ENST00000438441 SENP3Q9H4L4 574 aaPredicted RBP19.83■□□□□ 0.77
NEK2P2-201ENST00000438441 PHF23Q9BUL5 403 aaPredicted RBP19.77■□□□□ 0.76
NEK2P2-201ENST00000438441 FOXD1Q16676 465 aa18.48■□□□□ 0.55
NEK2P2-201ENST00000438441 PLPPR3Q6T4P5 718 aa18.14■□□□□ 0.49
NEK2P2-201ENST00000438441 PPP6R1Q9UPN7 881 aa17.58■□□□□ 0.4
NEK2P2-201ENST00000438441 ADRA2BP18089 450 aa17.57■□□□□ 0.4
NEK2P2-201ENST00000438441 PIAS4Q8N2W9 510 aaPredicted RBP17.37■□□□□ 0.37
NEK2P2-201ENST00000438441 MSH5O43196 834 aa17.11■□□□□ 0.33
NEK2P2-201ENST00000438441 POTEDQ86YR6 584 aa16.13■□□□□ 0.17
NEK2P2-201ENST00000438441 MAPK8IP2Q13387 824 aaPredicted RBP16.05■□□□□ 0.16
NEK2P2-201ENST00000438441 SCAF1Q9H7N4 1312 aaKnown RBP16.02■□□□□ 0.15
NEK2P2-201ENST00000438441 PPP4R3CPQ6ZMV5 832 aa15.99■□□□□ 0.15
NEK2P2-201ENST00000438441 DMRT2Q9Y5R5 561 aa15.77■□□□□ 0.12
NEK2P2-201ENST00000438441 CNKSR2Q8WXI2 1034 aa15.57■□□□□ 0.08
NEK2P2-201ENST00000438441 KCNA4P22459 653 aa15.5■□□□□ 0.07
NEK2P2-201ENST00000438441 NCBP3Q53F19 620 aaKnown RBP15.47■□□□□ 0.07
NEK2P2-201ENST00000438441 EHMT2Q96KQ7 1210 aa15.34■□□□□ 0.05
NEK2P2-201ENST00000438441 HOXD11P31277 338 aaPredicted RBP15.32■□□□□ 0.04
NEK2P2-201ENST00000438441 RNF216Q9NWF9 866 aaPredicted RBP15.32■□□□□ 0.04
NEK2P2-201ENST00000438441 DCAF8L1A6NGE4 600 aa15.25■□□□□ 0.03
NEK2P2-201ENST00000438441 NPM3O75607 178 aaKnown RBP15.23■□□□□ 0.03
NEK2P2-201ENST00000438441 NISCHQ9Y2I1 1504 aa15□□□□□ -0.01
NEK2P2-201ENST00000438441 SLC4A1APQ9BWU0 796 aaKnown RBP14.89□□□□□ -0.03
NEK2P2-201ENST00000438441 CSRNP3Q8WYN3 585 aa14.76□□□□□ -0.05
NEK2P2-201ENST00000438441 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.7□□□□□ -0.06
NEK2P2-201ENST00000438441 DNAJC5BQ9UF47 199 aa14.68□□□□□ -0.06
NEK2P2-201ENST00000438441 RNF39Q9H2S5 420 aa14.64□□□□□ -0.07
NEK2P2-201ENST00000438441 CACNB1Q02641 598 aaPredicted RBP14.55□□□□□ -0.08
NEK2P2-201ENST00000438441 SLC4A2P04920 1241 aa14.46□□□□□ -0.09
NEK2P2-201ENST00000438441 C1QBPQ07021 282 aaKnown RBP14.43□□□□□ -0.1
NEK2P2-201ENST00000438441 U3KPZ7 1027 aaPredicted RBP14.37□□□□□ -0.11
NEK2P2-201ENST00000438441 ZBTB22O15209 634 aa14.28□□□□□ -0.12
NEK2P2-201ENST00000438441 FOXD4L1Q9NU39 408 aa14.17□□□□□ -0.14
NEK2P2-201ENST00000438441 SPINK5Q9NQ38 1064 aaPredicted RBP14.1□□□□□ -0.15
NEK2P2-201ENST00000438441 CAPN15O75808 1086 aa14.08□□□□□ -0.16
NEK2P2-201ENST00000438441 MYCNP04198 464 aaPredicted RBP14.07□□□□□ -0.16
NEK2P2-201ENST00000438441 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.06□□□□□ -0.16
NEK2P2-201ENST00000438441 HNRNPUL2Q1KMD3 747 aaKnown RBP14.06□□□□□ -0.16
NEK2P2-201ENST00000438441 SAMD1Q6SPF0 538 aaPredicted RBP14.01□□□□□ -0.17
NEK2P2-201ENST00000438441 APLP2Q06481 763 aa13.98□□□□□ -0.17
NEK2P2-201ENST00000438441 TRHP20396 242 aaPredicted RBP13.96□□□□□ -0.17
NEK2P2-201ENST00000438441 DSG3P32926 999 aa13.85□□□□□ -0.19
NEK2P2-201ENST00000438441 ZNF219Q9P2Y4 722 aaPredicted RBP13.85□□□□□ -0.19
NEK2P2-201ENST00000438441 ABCB7O75027 752 aa13.81□□□□□ -0.2
NEK2P2-201ENST00000438441 ATF5Q9Y2D1 282 aaPredicted RBP13.77□□□□□ -0.21
NEK2P2-201ENST00000438441 ATXN8OSP0DMR3 200 aa13.67□□□□□ -0.22
NEK2P2-201ENST00000438441 POLA2Q14181 598 aa13.64□□□□□ -0.23
NEK2P2-201ENST00000438441 RTN4Q9NQC3 1192 aaKnown RBP13.38□□□□□ -0.27
NEK2P2-201ENST00000438441 FKBP8Q14318 412 aa13.34□□□□□ -0.27
NEK2P2-201ENST00000438441 AMER1Q5JTC6 1135 aaPredicted RBP13.33□□□□□ -0.28
NEK2P2-201ENST00000438441 ZBTB12Q9Y330 459 aaPredicted RBP13.31□□□□□ -0.28
NEK2P2-201ENST00000438441 SLC24A1O60721 1099 aa13.2□□□□□ -0.3
NEK2P2-201ENST00000438441 FBLN2P98095 1184 aa13.2□□□□□ -0.3
NEK2P2-201ENST00000438441 RBM42Q9BTD8 480 aaKnown RBP13.18□□□□□ -0.3
NEK2P2-201ENST00000438441 OSCARQ8IYS5 282 aa13.17□□□□□ -0.3
NEK2P2-201ENST00000438441 MKRN4PQ13434 485 aaPredicted RBP13.13□□□□□ -0.31
NEK2P2-201ENST00000438441 CCDC180Q9P1Z9 1646 aa13.05□□□□□ -0.32
NEK2P2-201ENST00000438441 AKT1S1Q96B36 256 aa12.96□□□□□ -0.33
NEK2P2-201ENST00000438441 SPDYE2BA6NHP3 402 aa12.94□□□□□ -0.34
NEK2P2-201ENST00000438441 SPDYE6P0CI01 402 aa12.94□□□□□ -0.34
NEK2P2-201ENST00000438441 SPDYE2Q495Y8 402 aa12.94□□□□□ -0.34
NEK2P2-201ENST00000438441 ZNF692Q9BU19 519 aaPredicted RBP12.9□□□□□ -0.34
NEK2P2-201ENST00000438441 REM2Q8IYK8 340 aaPredicted RBP12.88□□□□□ -0.35
NEK2P2-201ENST00000438441 SSUH2Q9Y2M2 353 aa12.8□□□□□ -0.36
NEK2P2-201ENST00000438441 CHRDL2Q6WN34 429 aa12.79□□□□□ -0.36
NEK2P2-201ENST00000438441 SPDYE4A6NLX3 237 aa12.74□□□□□ -0.37
NEK2P2-201ENST00000438441 PABPN1Q86U42 306 aaKnown RBP eCLIP12.74□□□□□ -0.37
NEK2P2-201ENST00000438441 PITPNM1O00562 1244 aa12.73□□□□□ -0.37
NEK2P2-201ENST00000438441 POTEHQ6S545 545 aa12.71□□□□□ -0.37
NEK2P2-201ENST00000438441 CLEC11AQ9Y240 323 aa12.69□□□□□ -0.38
NEK2P2-201ENST00000438441 SPDYE1Q8NFV5 336 aaPredicted RBP12.65□□□□□ -0.38
NEK2P2-201ENST00000438441 ZCCHC6Q5VYS8 1495 aaKnown RBP12.63□□□□□ -0.39
NEK2P2-201ENST00000438441 FBXO3Q9UK99 471 aa12.61□□□□□ -0.39
NEK2P2-201ENST00000438441 PIP4P2Q8N4L2 257 aa12.57□□□□□ -0.4
NEK2P2-201ENST00000438441 FXR2P51116 673 aaKnown RBP eCLIP12.52□□□□□ -0.41
NEK2P2-201ENST00000438441 PRR29P0C7W0 189 aa12.5□□□□□ -0.41
NEK2P2-201ENST00000438441 PROM2Q8N271 834 aa12.5□□□□□ -0.41
NEK2P2-201ENST00000438441 DCAF1Q9Y4B6 1507 aa12.45□□□□□ -0.42
NEK2P2-201ENST00000438441 VASPP50552 380 aaPredicted RBP12.44□□□□□ -0.42
NEK2P2-201ENST00000438441 PRKAR2AP13861 404 aaKnown RBP12.43□□□□□ -0.42
NEK2P2-201ENST00000438441 STAG3Q9UJ98 1225 aa12.41□□□□□ -0.42
NEK2P2-201ENST00000438441 CHADLQ6NUI6 762 aa12.4□□□□□ -0.42
NEK2P2-201ENST00000438441 IFNLR1Q8IU57 520 aaPredicted RBP12.34□□□□□ -0.43
NEK2P2-201ENST00000438441 DCAF8L2P0C7V8 631 aa12.32□□□□□ -0.44
NEK2P2-201ENST00000438441 PLCB2Q00722 1185 aa12.31□□□□□ -0.44
NEK2P2-201ENST00000438441 HAX1O00165 279 aa12.3□□□□□ -0.44
NEK2P2-201ENST00000438441 MYO15BQ96JP2 1530 aa12.29□□□□□ -0.44
NEK2P2-201ENST00000438441 ABCC9O60706 1549 aa12.26□□□□□ -0.45
NEK2P2-201ENST00000438441 CREBZFQ9NS37 354 aa12.24□□□□□ -0.45
NEK2P2-201ENST00000438441 FARP1Q9Y4F1 1045 aaPredicted RBP12.2□□□□□ -0.46
NEK2P2-201ENST00000438441 HAP1P54257 671 aaPredicted RBP12.19□□□□□ -0.46
NEK2P2-201ENST00000438441 PKD2Q13563 968 aa12.18□□□□□ -0.46
NEK2P2-201ENST00000438441 EVX2Q03828 476 aa12.15□□□□□ -0.46
NEK2P2-201ENST00000438441 MIER1Q8N108 512 aa12.13□□□□□ -0.47
NEK2P2-201ENST00000438441 NACADO15069 1562 aa12.13□□□□□ -0.47
NEK2P2-201ENST00000438441 SHROOM4Q9ULL8 1493 aa12.13□□□□□ -0.47
NEK2P2-201ENST00000438441 KLHL34Q8N239 644 aa12.11□□□□□ -0.47
NEK2P2-201ENST00000438441 C19orf67A6NJJ6 358 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms