RNA–Protein interactions for RNA: ENST00000380782.6

MID1-204, Transcript of midline 1, humanhuman

TSL 1 (best) BASIC

Gene MID1, Length 3,352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MID1-204ENST00000380782 NISCHQ9Y2I1 1504 aa14.94□□□□□ -0.02
MID1-204ENST00000380782 HRCP23327 699 aa14.17□□□□□ -0.14
MID1-204ENST00000380782 PPARGC1BQ86YN6 1023 aaKnown RBP14.05□□□□□ -0.16
MID1-204ENST00000380782 PCGF6Q9BYE7 350 aa13.95□□□□□ -0.18
MID1-204ENST00000380782 PELP1Q8IZL8 1130 aaKnown RBP13.85□□□□□ -0.19
MID1-204ENST00000380782 SUPT5HO00267 1087 aaKnown RBP13.83□□□□□ -0.19
MID1-204ENST00000380782 SHROOM4Q9ULL8 1493 aa13.78□□□□□ -0.2
MID1-204ENST00000380782 MYO15BQ96JP2 1530 aa13.59□□□□□ -0.23
MID1-204ENST00000380782 SCAF1Q9H7N4 1312 aaKnown RBP13.58□□□□□ -0.24
MID1-204ENST00000380782 CHIC1Q5VXU3 224 aa13.51□□□□□ -0.25
MID1-204ENST00000380782 LOC105371045A0A1W2PR82 267 aa13.36□□□□□ -0.27
MID1-204ENST00000380782 MYT1Q01538 1121 aa13.32□□□□□ -0.28
MID1-204ENST00000380782 TRIM26Q12899 539 aaPredicted RBP13.3□□□□□ -0.28
MID1-204ENST00000380782 DCAF1Q9Y4B6 1507 aa13.2□□□□□ -0.3
MID1-204ENST00000380782 ZEB1P37275 1124 aaPredicted RBP13.19□□□□□ -0.3
MID1-204ENST00000380782 NEUROD1Q13562 356 aa13.17□□□□□ -0.3
MID1-204ENST00000380782 ACIN1Q9UKV3 1341 aaKnown RBP13.15□□□□□ -0.3
MID1-204ENST00000380782 GTF3C3Q9Y5Q9 886 aa13.14□□□□□ -0.31
MID1-204ENST00000380782 CCDC180Q9P1Z9 1646 aa13.04□□□□□ -0.32
MID1-204ENST00000380782 CENPBP07199 599 aaPredicted RBP12.97□□□□□ -0.33
MID1-204ENST00000380782 EHMT2Q96KQ7 1210 aa12.94□□□□□ -0.34
MID1-204ENST00000380782 DCAF8L2P0C7V8 631 aa12.93□□□□□ -0.34
MID1-204ENST00000380782 DIEXFQ68CQ4 756 aaKnown RBP12.87□□□□□ -0.35
MID1-204ENST00000380782 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.87□□□□□ -0.35
MID1-204ENST00000380782 FAM9AQ8IZU1 332 aaPredicted RBP12.85□□□□□ -0.35
MID1-204ENST00000380782 YTHDC1Q96MU7 727 aaKnown RBP12.84□□□□□ -0.35
MID1-204ENST00000380782 CCER1Q8TC90 406 aaPredicted RBP12.83□□□□□ -0.36
MID1-204ENST00000380782 ZCCHC6Q5VYS8 1495 aaKnown RBP12.7□□□□□ -0.38
MID1-204ENST00000380782 TRIM41Q8WV44 630 aa12.67□□□□□ -0.38
MID1-204ENST00000380782 BCL11AQ9H165 835 aa12.66□□□□□ -0.38
MID1-204ENST00000380782 TTBK1Q5TCY1 1321 aaPredicted RBP12.64□□□□□ -0.39
MID1-204ENST00000380782 MIER1Q8N108 512 aa12.55□□□□□ -0.4
MID1-204ENST00000380782 ZNF316A6NFI3 1004 aaPredicted RBP12.53□□□□□ -0.4
MID1-204ENST00000380782 ANP32EQ9BTT0 268 aa12.49□□□□□ -0.41
MID1-204ENST00000380782 CSRNP3Q8WYN3 585 aa12.43□□□□□ -0.42
MID1-204ENST00000380782 PRKCSHP14314 528 aaPredicted RBP12.43□□□□□ -0.42
MID1-204ENST00000380782 TSHZ2Q9NRE2 1034 aa12.39□□□□□ -0.43
MID1-204ENST00000380782 SUPT16HQ9Y5B9 1047 aaKnown RBP12.39□□□□□ -0.43
MID1-204ENST00000380782 BCANQ96GW7 911 aa12.28□□□□□ -0.44
MID1-204ENST00000380782 HNRNPUL2Q1KMD3 747 aaKnown RBP12.24□□□□□ -0.45
MID1-204ENST00000380782 RSF1Q96T23 1441 aaPredicted RBP12.19□□□□□ -0.46
MID1-204ENST00000380782 RB1CC1Q8TDY2 1594 aa12.16□□□□□ -0.46
MID1-204ENST00000380782 CLSPNQ9HAW4 1339 aa12.15□□□□□ -0.46
MID1-204ENST00000380782 FKBP8Q14318 412 aa12.1□□□□□ -0.47
MID1-204ENST00000380782 RBM19Q9Y4C8 960 aaKnown RBP12.1□□□□□ -0.47
MID1-204ENST00000380782 ABCC9O60706 1549 aa12.08□□□□□ -0.48
MID1-204ENST00000380782 KCNH8Q96L42 1107 aa12.07□□□□□ -0.48
MID1-204ENST00000380782 ITGAEP38570 1179 aa12.07□□□□□ -0.48
MID1-204ENST00000380782 UBTFP17480 764 aaKnown RBP12.06□□□□□ -0.48
MID1-204ENST00000380782 CEP162Q5TB80 1403 aa12.04□□□□□ -0.48
MID1-204ENST00000380782 WRNQ14191 1432 aaPredicted RBP eCLIP12.01□□□□□ -0.49
MID1-204ENST00000380782 MSH5O43196 834 aa12.01□□□□□ -0.49
MID1-204ENST00000380782 ERICH6Q7L0X2 663 aa11.99□□□□□ -0.49
MID1-204ENST00000380782 NEFLP07196 543 aa11.96□□□□□ -0.49
MID1-204ENST00000380782 RANGAP1P46060 587 aaPredicted RBP11.93□□□□□ -0.5
MID1-204ENST00000380782 ANO8Q9HCE9 1232 aaPredicted RBP11.91□□□□□ -0.5
MID1-204ENST00000380782 SCRIBQ14160 1630 aa11.91□□□□□ -0.5
MID1-204ENST00000380782 TRIM52Q96A61 297 aa11.89□□□□□ -0.51
MID1-204ENST00000380782 TNIKQ9UKE5 1360 aa11.88□□□□□ -0.51
MID1-204ENST00000380782 APLP2Q06481 763 aa11.88□□□□□ -0.51
MID1-204ENST00000380782 DEKP35659 375 aaKnown RBP11.87□□□□□ -0.51
MID1-204ENST00000380782 SOGA1O94964 1423 aa11.86□□□□□ -0.51
MID1-204ENST00000380782 CCDC88BA6NC98 1476 aa11.85□□□□□ -0.51
MID1-204ENST00000380782 DDX10Q13206 875 aaKnown RBP11.84□□□□□ -0.51
MID1-204ENST00000380782 ABCC8Q09428 1581 aa11.84□□□□□ -0.51
MID1-204ENST00000380782 IRX6P78412 446 aaPredicted RBP11.83□□□□□ -0.52
MID1-204ENST00000380782 CECR2Q9BXF3 1484 aa11.83□□□□□ -0.52
MID1-204ENST00000380782 CCDC136Q96JN2 1154 aa11.81□□□□□ -0.52
MID1-204ENST00000380782 DHX57Q6P158 1386 aaKnown RBP11.79□□□□□ -0.52
MID1-204ENST00000380782 RUSC2Q8N2Y8 1516 aa11.79□□□□□ -0.52
MID1-204ENST00000380782 NBR1Q14596 966 aa11.79□□□□□ -0.52
MID1-204ENST00000380782 CDK11AQ9UQ88 783 aaPredicted RBP11.79□□□□□ -0.52
MID1-204ENST00000380782 FANCIQ9NVI1 1328 aa11.77□□□□□ -0.53
MID1-204ENST00000380782 MROH2BQ7Z745 1585 aa11.77□□□□□ -0.53
MID1-204ENST00000380782 HIRIP3Q9BW71 556 aaPredicted RBP11.76□□□□□ -0.53
MID1-204ENST00000380782 SALL2Q9Y467 1007 aaPredicted RBP11.76□□□□□ -0.53
MID1-204ENST00000380782 WIZO95785 1651 aa11.74□□□□□ -0.53
MID1-204ENST00000380782 RTN4Q9NQC3 1192 aaKnown RBP11.71□□□□□ -0.54
MID1-204ENST00000380782 MYT1LQ9UL68 1186 aa11.69□□□□□ -0.54
MID1-204ENST00000380782 CLIP1P30622 1438 aa11.69□□□□□ -0.54
MID1-204ENST00000380782 GOLGA3Q08378 1498 aa11.69□□□□□ -0.54
MID1-204ENST00000380782 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.68□□□□□ -0.54
MID1-204ENST00000380782 ANP32CO43423 234 aa11.66□□□□□ -0.54
MID1-204ENST00000380782 PAK3O75914 559 aaPredicted RBP11.64□□□□□ -0.55
MID1-204ENST00000380782 IL27Q8NEV9 243 aa11.64□□□□□ -0.55
MID1-204ENST00000380782 HNRNPUQ00839 825 aaKnown RBP eCLIP11.63□□□□□ -0.55
MID1-204ENST00000380782 VPS8Q8N3P4 1428 aa11.63□□□□□ -0.55
MID1-204ENST00000380782 KANK4Q5T7N3 995 aaPredicted RBP11.62□□□□□ -0.55
MID1-204ENST00000380782 NOP58Q9Y2X3 529 aaKnown RBP11.62□□□□□ -0.55
MID1-204ENST00000380782 SIN3AQ96ST3 1273 aa11.61□□□□□ -0.55
MID1-204ENST00000380782 PPP1R15AO75807 674 aaPredicted RBP11.6□□□□□ -0.55
MID1-204ENST00000380782 B4GALNT3Q6L9W6 998 aa11.6□□□□□ -0.55
MID1-204ENST00000380782 EEA1Q15075 1411 aa11.6□□□□□ -0.55
MID1-204ENST00000380782 EIF4G1Q04637 1599 aaKnown RBP11.6□□□□□ -0.55
MID1-204ENST00000380782 RTL5Q5HYW3 569 aaPredicted RBP11.58□□□□□ -0.56
MID1-204ENST00000380782 CCER2I3L3R5 266 aa11.58□□□□□ -0.56
MID1-204ENST00000380782 PPP4R2Q9NY27 417 aa11.54□□□□□ -0.56
MID1-204ENST00000380782 ERICH6BQ5W0A0 696 aa11.54□□□□□ -0.56
MID1-204ENST00000380782 CEP164Q9UPV0 1460 aa11.53□□□□□ -0.56
MID1-204ENST00000380782 BAZ1AQ9NRL2 1556 aaPredicted RBP11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 119.5 ms