RNA–Protein interactions for RNA: ENST00000549493.6

ANKS1B-215, Transcript of ankyrin repeat and sterile alpha motif domain containing 1B, human

TSL 1 (best) BASIC

Gene ANKS1B, Length 3,328 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ANKS1B-215	ENST00000549493	NISCH	Q9Y2I1	1504 aa		16.49	■□□□□ 0.23
ANKS1B-215	ENST00000549493	SHROOM4	Q9ULL8	1493 aa		14.49	□□□□□ -0.09
ANKS1B-215	ENST00000549493	SUPT5H	O00267	1087 aa	Known RBP	14.24	□□□□□ -0.13
ANKS1B-215	ENST00000549493	DCAF8L2	P0C7V8	631 aa		14.08	□□□□□ -0.15
ANKS1B-215	ENST00000549493	ZCCHC6	Q5VYS8	1495 aa	Known RBP	13.92	□□□□□ -0.18
ANKS1B-215	ENST00000549493	CCDC180	Q9P1Z9	1646 aa		13.78	□□□□□ -0.2
ANKS1B-215	ENST00000549493	CHIC1	Q5VXU3	224 aa		13.74	□□□□□ -0.21
ANKS1B-215	ENST00000549493	MYO15B	Q96JP2	1530 aa		13.7	□□□□□ -0.22
ANKS1B-215	ENST00000549493	PCGF6	Q9BYE7	350 aa		13.52	□□□□□ -0.25
ANKS1B-215	ENST00000549493	LOC105371045	A0A1W2PR82	267 aa		13.49	□□□□□ -0.25
ANKS1B-215	ENST00000549493	HRC	P23327	699 aa		13.42	□□□□□ -0.26
ANKS1B-215	ENST00000549493	AEBP2	Q6ZN18	517 aa	Predicted RBP	13.4	□□□□□ -0.26
ANKS1B-215	ENST00000549493	DCAF1	Q9Y4B6	1507 aa		13.35	□□□□□ -0.27
ANKS1B-215	ENST00000549493	PPARGC1B	Q86YN6	1023 aa	Known RBP	13.34	□□□□□ -0.27
ANKS1B-215	ENST00000549493	EHMT2	Q96KQ7	1210 aa		13.25	□□□□□ -0.29
ANKS1B-215	ENST00000549493	SCRIB	Q14160	1630 aa		13.22	□□□□□ -0.29
ANKS1B-215	ENST00000549493	FAM9A	Q8IZU1	332 aa	Predicted RBP	13.22	□□□□□ -0.29
ANKS1B-215	ENST00000549493	RSF1	Q96T23	1441 aa	Predicted RBP	13.16	□□□□□ -0.3
ANKS1B-215	ENST00000549493	TRIM41	Q8WV44	630 aa		13.14	□□□□□ -0.31
ANKS1B-215	ENST00000549493	ABCC9	O60706	1549 aa		13.13	□□□□□ -0.31
ANKS1B-215	ENST00000549493	TRIM26	Q12899	539 aa	Predicted RBP	13.07	□□□□□ -0.32
ANKS1B-215	ENST00000549493	RB1CC1	Q8TDY2	1594 aa		13.04	□□□□□ -0.32
ANKS1B-215	ENST00000549493	CECR2	Q9BXF3	1484 aa		13.01	□□□□□ -0.33
ANKS1B-215	ENST00000549493	MROH2B	Q7Z745	1585 aa		12.91	□□□□□ -0.34
ANKS1B-215	ENST00000549493	WIZ	O95785	1651 aa		12.83	□□□□□ -0.36
ANKS1B-215	ENST00000549493	NACAD	O15069	1562 aa		12.81	□□□□□ -0.36
ANKS1B-215	ENST00000549493	TTBK1	Q5TCY1	1321 aa	Predicted RBP	12.8	□□□□□ -0.36
ANKS1B-215	ENST00000549493	PELP1	Q8IZL8	1130 aa	Known RBP	12.75	□□□□□ -0.37
ANKS1B-215	ENST00000549493	ZEB1	P37275	1124 aa	Predicted RBP	12.71	□□□□□ -0.37
ANKS1B-215	ENST00000549493	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	12.71	□□□□□ -0.38
ANKS1B-215	ENST00000549493	PABPN1	Q86U42	306 aa	Known RBP eCLIP	12.66	□□□□□ -0.38
ANKS1B-215	ENST00000549493	MYT1	Q01538	1121 aa		12.65	□□□□□ -0.38
ANKS1B-215	ENST00000549493	ABCC8	Q09428	1581 aa		12.65	□□□□□ -0.38
ANKS1B-215	ENST00000549493	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	12.62	□□□□□ -0.39
ANKS1B-215	ENST00000549493	CCDC88B	A6NC98	1476 aa		12.62	□□□□□ -0.39
ANKS1B-215	ENST00000549493	CCER1	Q8TC90	406 aa	Predicted RBP	12.62	□□□□□ -0.39
ANKS1B-215	ENST00000549493	SOGA1	O94964	1423 aa		12.57	□□□□□ -0.4
ANKS1B-215	ENST00000549493	UBTF	P17480	764 aa	Known RBP	12.56	□□□□□ -0.4
ANKS1B-215	ENST00000549493	SLC24A1	O60721	1099 aa		12.55	□□□□□ -0.4
ANKS1B-215	ENST00000549493	EIF4G1	Q04637	1599 aa	Known RBP	12.54	□□□□□ -0.4
ANKS1B-215	ENST00000549493	RUSC2	Q8N2Y8	1516 aa		12.53	□□□□□ -0.4
ANKS1B-215	ENST00000549493	TOP2A	P11388	1531 aa	Known RBP	12.52	□□□□□ -0.41
ANKS1B-215	ENST00000549493	SMARCA4	P51532	1647 aa		12.51	□□□□□ -0.41
ANKS1B-215	ENST00000549493	SMARCA2	P51531	1590 aa		12.5	□□□□□ -0.41
ANKS1B-215	ENST00000549493	SCAF1	Q9H7N4	1312 aa	Known RBP	12.49	□□□□□ -0.41
ANKS1B-215	ENST00000549493	CSRNP3	Q8WYN3	585 aa		12.49	□□□□□ -0.41
ANKS1B-215	ENST00000549493	CEP162	Q5TB80	1403 aa		12.49	□□□□□ -0.41
ANKS1B-215	ENST00000549493	RANGAP1	P46060	587 aa	Predicted RBP	12.48	□□□□□ -0.41
ANKS1B-215	ENST00000549493	UNC13A	Q9UPW8	1703 aa		12.44	□□□□□ -0.42
ANKS1B-215	ENST00000549493	TNIK	Q9UKE5	1360 aa		12.4	□□□□□ -0.43
ANKS1B-215	ENST00000549493	HNRNPUL2	Q1KMD3	747 aa	Known RBP	12.38	□□□□□ -0.43
ANKS1B-215	ENST00000549493	PRKCSH	P14314	528 aa	Predicted RBP	12.37	□□□□□ -0.43
ANKS1B-215	ENST00000549493	DIEXF	Q68CQ4	756 aa	Known RBP	12.37	□□□□□ -0.43
ANKS1B-215	ENST00000549493	WRN	Q14191	1432 aa	Predicted RBP eCLIP	12.36	□□□□□ -0.43
ANKS1B-215	ENST00000549493	NEUROD1	Q13562	356 aa		12.35	□□□□□ -0.43
ANKS1B-215	ENST00000549493	BICRA	Q9NZM4	1560 aa		12.33	□□□□□ -0.44
ANKS1B-215	ENST00000549493	GOLGA3	Q08378	1498 aa		12.3	□□□□□ -0.44
ANKS1B-215	ENST00000549493	EEA1	Q15075	1411 aa		12.28	□□□□□ -0.44
ANKS1B-215	ENST00000549493	ACIN1	Q9UKV3	1341 aa	Known RBP	12.28	□□□□□ -0.44
ANKS1B-215	ENST00000549493	SYNJ1	O43426	1573 aa		12.27	□□□□□ -0.44
ANKS1B-215	ENST00000549493	YTHDC1	Q96MU7	727 aa	Known RBP	12.24	□□□□□ -0.45
ANKS1B-215	ENST00000549493	CLIP1	P30622	1438 aa		12.24	□□□□□ -0.45
ANKS1B-215	ENST00000549493	ATAD2B	Q9ULI0	1458 aa		12.24	□□□□□ -0.45
ANKS1B-215	ENST00000549493	GTF3C3	Q9Y5Q9	886 aa		12.23	□□□□□ -0.45
ANKS1B-215	ENST00000549493	APLP2	Q06481	763 aa		12.22	□□□□□ -0.45
ANKS1B-215	ENST00000549493	BAZ1B	Q9UIG0	1483 aa	Known RBP	12.22	□□□□□ -0.45
ANKS1B-215	ENST00000549493	RAPGEF2	Q9Y4G8	1499 aa		12.22	□□□□□ -0.45
ANKS1B-215	ENST00000549493	ZNF316	A6NFI3	1004 aa	Predicted RBP	12.21	□□□□□ -0.45
ANKS1B-215	ENST00000549493	CEP164	Q9UPV0	1460 aa		12.21	□□□□□ -0.46
ANKS1B-215	ENST00000549493	PEG3	Q9GZU2	1588 aa		12.16	□□□□□ -0.46
ANKS1B-215	ENST00000549493	CENPB	P07199	599 aa	Predicted RBP	12.16	□□□□□ -0.46
ANKS1B-215	ENST00000549493	MIER1	Q8N108	512 aa		12.14	□□□□□ -0.47
ANKS1B-215	ENST00000549493	VPS8	Q8N3P4	1428 aa		12.14	□□□□□ -0.47
ANKS1B-215	ENST00000549493	KIF21B	O75037	1637 aa		12.11	□□□□□ -0.47
ANKS1B-215	ENST00000549493	KANK4	Q5T7N3	995 aa	Predicted RBP	12.11	□□□□□ -0.47
ANKS1B-215	ENST00000549493	ITGAE	P38570	1179 aa		12.08	□□□□□ -0.48
ANKS1B-215	ENST00000549493	TOP2B	Q02880	1626 aa		12.03	□□□□□ -0.48
ANKS1B-215	ENST00000549493	ARAP1	Q96P48	1450 aa		11.99	□□□□□ -0.49
ANKS1B-215	ENST00000549493	PRX	Q9BXM0	1461 aa		11.99	□□□□□ -0.49
ANKS1B-215	ENST00000549493	CUX1	P39880	1505 aa		11.98	□□□□□ -0.49
ANKS1B-215	ENST00000549493	ERICH6	Q7L0X2	663 aa		11.98	□□□□□ -0.49
ANKS1B-215	ENST00000549493	DHX57	Q6P158	1386 aa	Known RBP	11.96	□□□□□ -0.49
ANKS1B-215	ENST00000549493	KIF27	Q86VH2	1401 aa		11.95	□□□□□ -0.5
ANKS1B-215	ENST00000549493	P3H3	Q8IVL6	736 aa		11.94	□□□□□ -0.5
ANKS1B-215	ENST00000549493	ATP1B4	Q9UN42	357 aa	Predicted RBP	11.94	□□□□□ -0.5
ANKS1B-215	ENST00000549493	NCAPD3	P42695	1498 aa		11.93	□□□□□ -0.5
ANKS1B-215	ENST00000549493	BIVM-ERCC5	R4GMW8	1640 aa		11.92	□□□□□ -0.5
ANKS1B-215	ENST00000549493	ERICH3	Q5RHP9	1530 aa		11.9	□□□□□ -0.5
ANKS1B-215	ENST00000549493	ARHGAP35	Q9NRY4	1499 aa		11.89	□□□□□ -0.51
ANKS1B-215	ENST00000549493	CUX2	O14529	1486 aa		11.88	□□□□□ -0.51
ANKS1B-215	ENST00000549493	CFTR	P13569	1480 aa		11.88	□□□□□ -0.51
ANKS1B-215	ENST00000549493	CCNB3	Q8WWL7	1395 aa		11.87	□□□□□ -0.51
ANKS1B-215	ENST00000549493	IGF1R	P08069	1367 aa		11.86	□□□□□ -0.51
ANKS1B-215	ENST00000549493	FAM50A	Q14320	339 aa	Known RBP	11.85	□□□□□ -0.51
ANKS1B-215	ENST00000549493	HMGXB3	Q12766	1538 aa		11.85	□□□□□ -0.51
ANKS1B-215	ENST00000549493	SENP3	Q9H4L4	574 aa	Predicted RBP	11.84	□□□□□ -0.51
ANKS1B-215	ENST00000549493	RRBP1	Q9P2E9	1410 aa	Known RBP	11.84	□□□□□ -0.51
ANKS1B-215	ENST00000549493	KCNH8	Q96L42	1107 aa		11.83	□□□□□ -0.52
ANKS1B-215	ENST00000549493	CARMIL1	Q5VZK9	1371 aa		11.82	□□□□□ -0.52
ANKS1B-215	ENST00000549493	SIN3A	Q96ST3	1273 aa		11.82	□□□□□ -0.52

Retrieved 100 of 20,778 RNA–protein pairs in 13 ms