Protein–RNA interactions for Protein: Q9NRF8

CTPS2, CTP synthase 2, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS2Q9NRF8 PTBP1P-201ENST00000554374 1601 ntBASIC18.34■□□□□ 0.53
CTPS2Q9NRF8 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CTPS2Q9NRF8 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CTPS2Q9NRF8 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CTPS2Q9NRF8 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC18.34■□□□□ 0.53
CTPS2Q9NRF8 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.34■□□□□ 0.53
CTPS2Q9NRF8 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CTPS2Q9NRF8 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CTPS2Q9NRF8 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC18.34■□□□□ 0.53
CTPS2Q9NRF8 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CTPS2Q9NRF8 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC18.34■□□□□ 0.53
CTPS2Q9NRF8 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
CTPS2Q9NRF8 AC090192.1-201ENST00000517740 490 ntBASIC18.34■□□□□ 0.53
CTPS2Q9NRF8 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC18.34■□□□□ 0.53
CTPS2Q9NRF8 TK2-208ENST00000545043 1120 ntTSL 2 BASIC18.34■□□□□ 0.53
CTPS2Q9NRF8 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CTPS2Q9NRF8 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC18.34■□□□□ 0.53
CTPS2Q9NRF8 AL589743.5-201ENST00000616611 1050 ntBASIC18.34■□□□□ 0.53
CTPS2Q9NRF8 MARS-234ENST00000630571 216 ntTSL 5 BASIC18.34■□□□□ 0.53
CTPS2Q9NRF8 MARS-235ENST00000630803 183 ntTSL 3 BASIC18.34■□□□□ 0.53
CTPS2Q9NRF8 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.34■□□□□ 0.53
CTPS2Q9NRF8 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CTPS2Q9NRF8 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CTPS2Q9NRF8 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.34■□□□□ 0.53
CTPS2Q9NRF8 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CTPS2Q9NRF8 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.34■□□□□ 0.53
CTPS2Q9NRF8 AC020763.4-201ENST00000623414 4170 ntBASIC18.34■□□□□ 0.53
CTPS2Q9NRF8 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CTPS2Q9NRF8 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.34■□□□□ 0.53
CTPS2Q9NRF8 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CTPS2Q9NRF8 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC18.33■□□□□ 0.53
CTPS2Q9NRF8 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC18.33■□□□□ 0.53
CTPS2Q9NRF8 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.33■□□□□ 0.53
CTPS2Q9NRF8 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CTPS2Q9NRF8 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CTPS2Q9NRF8 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CTPS2Q9NRF8 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CTPS2Q9NRF8 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
CTPS2Q9NRF8 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CTPS2Q9NRF8 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC18.33■□□□□ 0.52
CTPS2Q9NRF8 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CTPS2Q9NRF8 NCF1B-203ENST00000435988 1254 ntBASIC18.33■□□□□ 0.52
CTPS2Q9NRF8 MAP2K4P1-201ENST00000438453 1195 ntBASIC18.33■□□□□ 0.52
CTPS2Q9NRF8 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC18.33■□□□□ 0.52
CTPS2Q9NRF8 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC18.33■□□□□ 0.52
CTPS2Q9NRF8 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CTPS2Q9NRF8 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CTPS2Q9NRF8 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
CTPS2Q9NRF8 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CTPS2Q9NRF8 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
CTPS2Q9NRF8 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.33■□□□□ 0.52
CTPS2Q9NRF8 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
CTPS2Q9NRF8 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CTPS2Q9NRF8 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CTPS2Q9NRF8 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CTPS2Q9NRF8 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
CTPS2Q9NRF8 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CTPS2Q9NRF8 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
CTPS2Q9NRF8 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC18.32■□□□□ 0.52
CTPS2Q9NRF8 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.32■□□□□ 0.52
CTPS2Q9NRF8 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CTPS2Q9NRF8 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC18.32■□□□□ 0.52
CTPS2Q9NRF8 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CTPS2Q9NRF8 LSM12P1-201ENST00000411836 588 ntBASIC18.32■□□□□ 0.52
CTPS2Q9NRF8 BX276092.2-201ENST00000417668 665 ntBASIC18.32■□□□□ 0.52
CTPS2Q9NRF8 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CTPS2Q9NRF8 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC18.32■□□□□ 0.52
CTPS2Q9NRF8 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC18.32■□□□□ 0.52
CTPS2Q9NRF8 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC18.32■□□□□ 0.52
CTPS2Q9NRF8 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
CTPS2Q9NRF8 GXYLT1P5-201ENST00000614548 1189 ntBASIC18.32■□□□□ 0.52
CTPS2Q9NRF8 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC18.32■□□□□ 0.52
CTPS2Q9NRF8 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC18.32■□□□□ 0.52
CTPS2Q9NRF8 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CTPS2Q9NRF8 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CTPS2Q9NRF8 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CTPS2Q9NRF8 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CTPS2Q9NRF8 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CTPS2Q9NRF8 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.32■□□□□ 0.52
CTPS2Q9NRF8 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CTPS2Q9NRF8 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CTPS2Q9NRF8 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CTPS2Q9NRF8 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CTPS2Q9NRF8 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CTPS2Q9NRF8 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.31■□□□□ 0.52
CTPS2Q9NRF8 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.31■□□□□ 0.52
CTPS2Q9NRF8 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CTPS2Q9NRF8 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CTPS2Q9NRF8 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CTPS2Q9NRF8 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC18.31■□□□□ 0.52
CTPS2Q9NRF8 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CTPS2Q9NRF8 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
CTPS2Q9NRF8 GPX1P1-201ENST00000388829 606 ntBASIC18.31■□□□□ 0.52
CTPS2Q9NRF8 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
CTPS2Q9NRF8 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.31■□□□□ 0.52
CTPS2Q9NRF8 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC18.31■□□□□ 0.52
CTPS2Q9NRF8 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC18.31■□□□□ 0.52
CTPS2Q9NRF8 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC18.31■□□□□ 0.52
CTPS2Q9NRF8 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC18.31■□□□□ 0.52
CTPS2Q9NRF8 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms