Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HMG20AQ9NP66 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HMG20AQ9NP66 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HMG20AQ9NP66 MIR939-201ENST00000401314 82 ntBASIC17.92■□□□□ 0.46
HMG20AQ9NP66 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC17.92■□□□□ 0.46
HMG20AQ9NP66 NALT1-201ENST00000429224 738 ntTSL 5 BASIC17.92■□□□□ 0.46
HMG20AQ9NP66 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC17.92■□□□□ 0.46
HMG20AQ9NP66 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HMG20AQ9NP66 AC105233.4-201ENST00000642045 216 ntBASIC17.92■□□□□ 0.46
HMG20AQ9NP66 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HMG20AQ9NP66 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HMG20AQ9NP66 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
HMG20AQ9NP66 AC135050.7-201ENST00000624508 2218 ntBASIC17.92■□□□□ 0.46
HMG20AQ9NP66 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HMG20AQ9NP66 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
HMG20AQ9NP66 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HMG20AQ9NP66 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HMG20AQ9NP66 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HMG20AQ9NP66 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HMG20AQ9NP66 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HMG20AQ9NP66 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HMG20AQ9NP66 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HMG20AQ9NP66 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HMG20AQ9NP66 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HMG20AQ9NP66 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC17.91■□□□□ 0.46
HMG20AQ9NP66 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
HMG20AQ9NP66 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HMG20AQ9NP66 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.91■□□□□ 0.46
HMG20AQ9NP66 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HMG20AQ9NP66 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
HMG20AQ9NP66 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
HMG20AQ9NP66 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.91■□□□□ 0.46
HMG20AQ9NP66 AC091305.1-201ENST00000479476 895 ntBASIC17.91■□□□□ 0.46
HMG20AQ9NP66 AF213884.3-201ENST00000563833 479 ntBASIC17.91■□□□□ 0.46
HMG20AQ9NP66 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC17.91■□□□□ 0.46
HMG20AQ9NP66 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HMG20AQ9NP66 AL133373.2-201ENST00000623187 2828 ntBASIC17.91■□□□□ 0.46
HMG20AQ9NP66 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HMG20AQ9NP66 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HMG20AQ9NP66 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
HMG20AQ9NP66 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
HMG20AQ9NP66 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC17.91■□□□□ 0.46
HMG20AQ9NP66 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
HMG20AQ9NP66 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
HMG20AQ9NP66 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.9■□□□□ 0.46
HMG20AQ9NP66 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HMG20AQ9NP66 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HMG20AQ9NP66 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
HMG20AQ9NP66 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HMG20AQ9NP66 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HMG20AQ9NP66 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.9■□□□□ 0.46
HMG20AQ9NP66 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HMG20AQ9NP66 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HMG20AQ9NP66 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HMG20AQ9NP66 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HMG20AQ9NP66 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
HMG20AQ9NP66 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
HMG20AQ9NP66 PXK-203ENST00000383715 1756 ntTSL 5 BASIC17.9■□□□□ 0.46
HMG20AQ9NP66 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
HMG20AQ9NP66 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HMG20AQ9NP66 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC17.9■□□□□ 0.46
HMG20AQ9NP66 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC17.9■□□□□ 0.46
HMG20AQ9NP66 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC17.9■□□□□ 0.46
HMG20AQ9NP66 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC17.9■□□□□ 0.46
HMG20AQ9NP66 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC17.9■□□□□ 0.46
HMG20AQ9NP66 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC17.9■□□□□ 0.46
HMG20AQ9NP66 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
HMG20AQ9NP66 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
HMG20AQ9NP66 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.9■□□□□ 0.46
HMG20AQ9NP66 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
HMG20AQ9NP66 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HMG20AQ9NP66 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.9■□□□□ 0.46
HMG20AQ9NP66 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC17.9■□□□□ 0.46
HMG20AQ9NP66 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.9■□□□□ 0.46
HMG20AQ9NP66 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.9■□□□□ 0.46
HMG20AQ9NP66 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HMG20AQ9NP66 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC17.9■□□□□ 0.46
HMG20AQ9NP66 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
HMG20AQ9NP66 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HMG20AQ9NP66 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC17.89■□□□□ 0.45
HMG20AQ9NP66 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
HMG20AQ9NP66 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.89■□□□□ 0.45
HMG20AQ9NP66 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
HMG20AQ9NP66 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
HMG20AQ9NP66 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HMG20AQ9NP66 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HMG20AQ9NP66 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HMG20AQ9NP66 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
HMG20AQ9NP66 AL031432.3-201ENST00000607698 485 ntBASIC17.89■□□□□ 0.45
HMG20AQ9NP66 AL136967.2-201ENST00000623968 743 ntBASIC17.89■□□□□ 0.45
HMG20AQ9NP66 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HMG20AQ9NP66 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HMG20AQ9NP66 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HMG20AQ9NP66 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
HMG20AQ9NP66 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
HMG20AQ9NP66 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HMG20AQ9NP66 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.88■□□□□ 0.45
HMG20AQ9NP66 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
HMG20AQ9NP66 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HMG20AQ9NP66 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms