Protein–RNA interactions for Protein: Q9H0L4

CSTF2T, Cleavage stimulation factor subunit 2 tau variant, humanhuman

Known RBP eCLIP

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2TQ9H0L4 LMBR1-215ENST00000461603 612 ntTSL 46.99□□□□□ -1.292e-8■■■■□ 19.8
CSTF2TQ9H0L4 LMBR1-212ENST00000448926 3629 ntTSL 23.66□□□□□ -1.822e-8■■■■□ 19.8
CSTF2TQ9H0L4 MAD1L1-207ENST00000429779 555 ntTSL 417.93■□□□□ 0.462e-10■■■■□ 19.8
CSTF2TQ9H0L4 SUPT5H-203ENST00000402194 3698 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.632e-10■■■■□ 19.8
CSTF2TQ9H0L4 SUPT5H-201ENST00000359191 3770 ntAPPRIS ALT1 TSL 1 (best) BASIC10.95□□□□□ -0.662e-10■■■■□ 19.8
CSTF2TQ9H0L4 SUPT5H-213ENST00000598725 3742 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.762e-10■■■■□ 19.8
CSTF2TQ9H0L4 SUPT5H-204ENST00000432763 3710 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.782e-10■■■■□ 19.8
CSTF2TQ9H0L4 SUPT5H-215ENST00000599117 3902 ntAPPRIS P3 TSL 5 BASIC10.02□□□□□ -0.812e-10■■■■□ 19.8
CSTF2TQ9H0L4 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC24.21■■□□□ 1.473e-6■■■■□ 19.8
CSTF2TQ9H0L4 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.323e-6■■■■□ 19.8
CSTF2TQ9H0L4 ST6GALNAC6-207ENST00000463086 505 ntTSL 522.65■■□□□ 1.223e-6■■■■□ 19.8
CSTF2TQ9H0L4 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC22.43■■□□□ 1.183e-6■■■■□ 19.8
CSTF2TQ9H0L4 ST6GALNAC6-209ENST00000480417 777 ntTSL 222.1■■□□□ 1.133e-6■■■■□ 19.8
CSTF2TQ9H0L4 ST6GALNAC6-208ENST00000478319 452 ntTSL 519.44■□□□□ 0.73e-6■■■■□ 19.8
CSTF2TQ9H0L4 ST6GALNAC6-212ENST00000485320 2357 ntTSL 518.47■□□□□ 0.553e-6■■■■□ 19.8
CSTF2TQ9H0L4 ST6GALNAC6-214ENST00000494611 474 ntTSL 517.66■□□□□ 0.423e-6■■■■□ 19.8
CSTF2TQ9H0L4 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.143e-6■■■■□ 19.8
CSTF2TQ9H0L4 ST6GALNAC6-210ENST00000481355 466 ntTSL 315.03■□□□□ -03e-6■■■■□ 19.8
CSTF2TQ9H0L4 GPC1-208ENST00000469694 2862 ntTSL 213.27□□□□□ -0.291e-6■■■■□ 19.8
CSTF2TQ9H0L4 ST6GALNAC6-213ENST00000494541 712 ntTSL 313.14□□□□□ -0.313e-6■■■■□ 19.8
CSTF2TQ9H0L4 ST6GALNAC6-206ENST00000447681 802 ntTSL 212.25□□□□□ -0.453e-6■■■■□ 19.8
CSTF2TQ9H0L4 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.199e-8■■■■□ 19.8
CSTF2TQ9H0L4 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC15.83■□□□□ 0.129e-8■■■■□ 19.8
CSTF2TQ9H0L4 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC14.17□□□□□ -0.149e-8■■■■□ 19.8
CSTF2TQ9H0L4 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC12.83□□□□□ -0.369e-8■■■■□ 19.8
CSTF2TQ9H0L4 PPP3CA-209ENST00000529324 579 ntTSL 38.54□□□□□ -1.049e-8■■■■□ 19.8
CSTF2TQ9H0L4 PPP3CA-205ENST00000507176 1958 ntTSL 1 (best) BASIC8.36□□□□□ -1.079e-8■■■■□ 19.8
CSTF2TQ9H0L4 PPP3CA-208ENST00000525819 569 ntTSL 43.94□□□□□ -1.789e-8■■■■□ 19.8
CSTF2TQ9H0L4 PRDM10-206ENST00000527581 620 ntTSL 315.63■□□□□ 0.096e-14■■■■□ 19.8
CSTF2TQ9H0L4 PRDM10-202ENST00000358825 6322 ntTSL 1 (best) BASIC12.7□□□□□ -0.386e-14■■■■□ 19.8
CSTF2TQ9H0L4 PRDM10-203ENST00000360871 6301 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.386e-14■■■■□ 19.8
CSTF2TQ9H0L4 PRDM10-207ENST00000528746 6182 ntTSL 5 BASIC9.91□□□□□ -0.826e-14■■■■□ 19.8
CSTF2TQ9H0L4 PRDM10-208ENST00000531431 528 ntTSL 44.94□□□□□ -1.626e-14■■■■□ 19.8
CSTF2TQ9H0L4 APLP2-218ENST00000533532 584 ntTSL 219.73■□□□□ 0.754e-10■■■■□ 19.8
CSTF2TQ9H0L4 APLP2-224ENST00000534582 556 ntTSL 519.73■□□□□ 0.754e-10■■■■□ 19.8
CSTF2TQ9H0L4 APLP2-209ENST00000527702 579 ntTSL 419.73■□□□□ 0.754e-10■■■■□ 19.8
CSTF2TQ9H0L4 APLP2-214ENST00000530132 542 ntTSL 419.73■□□□□ 0.754e-10■■■■□ 19.8
CSTF2TQ9H0L4 APLP2-223ENST00000534001 585 ntTSL 419.73■□□□□ 0.754e-10■■■■□ 19.8
CSTF2TQ9H0L4 APLP2-221ENST00000533713 560 ntTSL 419.73■□□□□ 0.754e-10■■■■□ 19.8
CSTF2TQ9H0L4 APLP2-213ENST00000529701 573 ntTSL 519.73■□□□□ 0.754e-10■■■■□ 19.8
CSTF2TQ9H0L4 APLP2-208ENST00000526330 582 ntTSL 319.73■□□□□ 0.754e-10■■■■□ 19.8
CSTF2TQ9H0L4 APLP2-217ENST00000533195 560 ntTSL 419.73■□□□□ 0.754e-10■■■■□ 19.8
CSTF2TQ9H0L4 APLP2-220ENST00000533618 574 ntTSL 419.73■□□□□ 0.754e-10■■■■□ 19.8
CSTF2TQ9H0L4 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC18.75■□□□□ 0.594e-10■■■■□ 19.8
CSTF2TQ9H0L4 APLP2-216ENST00000532456 664 ntTSL 418.43■□□□□ 0.544e-10■■■■□ 19.8
CSTF2TQ9H0L4 APLP2-219ENST00000533616 2041 ntTSL 216.99■□□□□ 0.314e-10■■■■□ 19.8
CSTF2TQ9H0L4 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC16.76■□□□□ 0.274e-10■■■■□ 19.8
CSTF2TQ9H0L4 APLP2-225ENST00000534761 551 ntTSL 515.88■□□□□ 0.134e-10■■■■□ 19.8
CSTF2TQ9H0L4 APLP2-211ENST00000529235 537 ntTSL 413.82□□□□□ -0.24e-10■■■■□ 19.8
CSTF2TQ9H0L4 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.244e-10■■■■□ 19.8
CSTF2TQ9H0L4 APLP2-201ENST00000263574 3727 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.44e-10■■■■□ 19.8
CSTF2TQ9H0L4 APLP2-202ENST00000278756 3687 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.444e-10■■■■□ 19.8
CSTF2TQ9H0L4 LINC01748-201ENST00000439156 1798 ntTSL 511.66□□□□□ -0.545e-8■■■■□ 19.8
CSTF2TQ9H0L4 LINC01748-202ENST00000634281 2864 ntTSL 5 BASIC8.48□□□□□ -1.055e-8■■■■□ 19.8
CSTF2TQ9H0L4 LINC01748-205ENST00000635616 2143 ntTSL 5 BASIC7.8□□□□□ -1.165e-8■■■■□ 19.8
CSTF2TQ9H0L4 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC5.4□□□□□ -1.555e-8■■■■□ 19.8
CSTF2TQ9H0L4 GAS8-210ENST00000564853 416 ntTSL 1 (best)20.22■□□□□ 0.837e-7■■■■□ 19.8
CSTF2TQ9H0L4 GAS8-204ENST00000540721 1308 ntTSL 218.32■□□□□ 0.527e-7■■■■□ 19.8
CSTF2TQ9H0L4 GAS8-212ENST00000565062 1394 ntTSL 216.73■□□□□ 0.277e-7■■■■□ 19.8
CSTF2TQ9H0L4 GAS8-203ENST00000537797 1080 ntTSL 214.49□□□□□ -0.097e-7■■■■□ 19.8
CSTF2TQ9H0L4 GAS8-220ENST00000620723 3308 ntTSL 2 BASIC12.42□□□□□ -0.427e-7■■■■□ 19.8
CSTF2TQ9H0L4 GAS8-201ENST00000268699 3185 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.457e-7■■■■□ 19.8
CSTF2TQ9H0L4 GAS8-214ENST00000566266 3174 ntTSL 1 (best)9.91□□□□□ -0.827e-7■■■■□ 19.8
CSTF2TQ9H0L4 GAS8-207ENST00000564392 479 ntTSL 38.03□□□□□ -1.127e-7■■■■□ 19.8
CSTF2TQ9H0L4 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.588e-7■■■■□ 19.8
CSTF2TQ9H0L4 AGAP3-226ENST00000622464 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.548e-7■■■■□ 19.8
CSTF2TQ9H0L4 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC7.21□□□□□ -1.262e-7■■■■□ 19.7
CSTF2TQ9H0L4 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.478e-7■■■■□ 19.7
CSTF2TQ9H0L4 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.428e-7■■■■□ 19.7
CSTF2TQ9H0L4 PPFIA1-222ENST00000532504 5159 ntTSL 1 (best)15.18■□□□□ 0.028e-7■■■■□ 19.7
CSTF2TQ9H0L4 PPFIA1-206ENST00000526262 4537 ntTSL 1 (best)8.2□□□□□ -1.18e-7■■■■□ 19.7
CSTF2TQ9H0L4 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC18.95■□□□□ 0.628e-8■■■■□ 19.7
CSTF2TQ9H0L4 SPRED2-205ENST00000440972 555 ntTSL 312.19□□□□□ -0.463e-8■■■■□ 19.7
CSTF2TQ9H0L4 SPRED2-201ENST00000356388 4097 ntTSL 1 (best) BASIC11.73□□□□□ -0.533e-8■■■■□ 19.7
CSTF2TQ9H0L4 ZFPM2-208ENST00000522160 468 ntTSL 34.82□□□□□ -1.648e-7■■■■□ 19.7
CSTF2TQ9H0L4 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC25.75■■□□□ 1.712e-10■■■■□ 19.7
CSTF2TQ9H0L4 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.881e-10■■■■□ 19.7
CSTF2TQ9H0L4 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.232e-7■■■■□ 19.7
CSTF2TQ9H0L4 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.272e-7■■■■□ 19.7
CSTF2TQ9H0L4 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.13e-6■■■■□ 19.7
CSTF2TQ9H0L4 ZC3H7B-202ENST00000486331 5262 ntTSL 212.4□□□□□ -0.423e-6■■■■□ 19.7
CSTF2TQ9H0L4 VCL-205ENST00000478896 727 ntTSL 512.61□□□□□ -0.391e-12■■■■□ 19.7
CSTF2TQ9H0L4 VCL-202ENST00000372755 6489 ntAPPRIS ALT1 TSL 1 (best) BASIC11.12□□□□□ -0.631e-12■■■■□ 19.7
CSTF2TQ9H0L4 VCL-201ENST00000211998 5490 ntAPPRIS P4 TSL 1 (best) BASIC10.11□□□□□ -0.791e-12■■■■□ 19.7
CSTF2TQ9H0L4 VCL-206ENST00000623461 7995 ntTSL 1 (best)8.63□□□□□ -1.031e-12■■■■□ 19.7
CSTF2TQ9H0L4 VCL-207ENST00000624354 3307 ntTSL 28.29□□□□□ -1.081e-12■■■■□ 19.7
CSTF2TQ9H0L4 CORO1C-205ENST00000546571 899 ntTSL 412.57□□□□□ -0.46e-11■■■■□ 19.7
CSTF2TQ9H0L4 TCF3-208ENST00000586318 631 ntTSL 315.28■□□□□ 0.046e-7■■■■□ 19.7
CSTF2TQ9H0L4 RABL6-208ENST00000464941 3361 ntTSL 215.13■□□□□ 0.017e-8■■■■□ 19.7
CSTF2TQ9H0L4 AMDHD2-205ENST00000563145 859 ntTSL 218.38■□□□□ 0.532e-23■■■■□ 19.7
CSTF2TQ9H0L4 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.444e-8■■■■□ 19.7
CSTF2TQ9H0L4 AMDHD2-215ENST00000568263 1482 ntTSL 216.9■□□□□ 0.33e-8■■■■□ 19.7
CSTF2TQ9H0L4 AMDHD2-206ENST00000563444 529 ntTSL 213.54□□□□□ -0.242e-23■■■■□ 19.7
CSTF2TQ9H0L4 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC29.26■■■□□ 2.271e-6■■■■□ 19.7
CSTF2TQ9H0L4 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC29.15■■■□□ 2.261e-6■■■■□ 19.7
CSTF2TQ9H0L4 PRR5-205ENST00000431834 1612 ntTSL 527.19■■□□□ 1.947e-7■■■■□ 19.7
CSTF2TQ9H0L4 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.374e-6■■■■□ 19.7
CSTF2TQ9H0L4 EMC10-207ENST00000599293 1926 ntTSL 323.31■■□□□ 1.324e-6■■■■□ 19.7
CSTF2TQ9H0L4 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.294e-6■■■■□ 19.7
CSTF2TQ9H0L4 PRR5-204ENST00000403696 789 ntTSL 322.95■■□□□ 1.262e-6■■■■□ 19.7
Retrieved 100 of 19,151 protein–RNA pairs in 170.3 ms