RNA–Protein interactions for RNA: ENST00000448926.5

LMBR1-212, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 3,629 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-212ENST00000448926 NISCHQ9Y2I1 1504 aa8.83□□□□□ -1
LMBR1-212ENST00000448926 SHROOM4Q9ULL8 1493 aa7.78□□□□□ -1.16
LMBR1-212ENST00000448926 DCAF8L2P0C7V8 631 aa7.72□□□□□ -1.17
LMBR1-212ENST00000448926 SUPT5HO00267 1087 aaKnown RBP7.54□□□□□ -1.2
LMBR1-212ENST00000448926 CCDC180Q9P1Z9 1646 aa7.44□□□□□ -1.22
LMBR1-212ENST00000448926 ZCCHC6Q5VYS8 1495 aaKnown RBP7.42□□□□□ -1.22
LMBR1-212ENST00000448926 ABCC9O60706 1549 aa7.31□□□□□ -1.24
LMBR1-212ENST00000448926 SCRIBQ14160 1630 aa7.21□□□□□ -1.26
LMBR1-212ENST00000448926 EHMT2Q96KQ7 1210 aa7.13□□□□□ -1.27
LMBR1-212ENST00000448926 CHIC1Q5VXU3 224 aa7.13□□□□□ -1.27
LMBR1-212ENST00000448926 MYO15BQ96JP2 1530 aa7.13□□□□□ -1.27
LMBR1-212ENST00000448926 POTEDQ86YR6 584 aa7.08□□□□□ -1.28
LMBR1-212ENST00000448926 DCAF1Q9Y4B6 1507 aa7.08□□□□□ -1.28
LMBR1-212ENST00000448926 LOC105371045A0A1W2PR82 267 aa7.06□□□□□ -1.28
LMBR1-212ENST00000448926 PABPN1Q86U42 306 aaKnown RBP eCLIP7.05□□□□□ -1.28
LMBR1-212ENST00000448926 FAM9AQ8IZU1 332 aaPredicted RBP7.04□□□□□ -1.28
LMBR1-212ENST00000448926 CECR2Q9BXF3 1484 aa7.03□□□□□ -1.28
LMBR1-212ENST00000448926 RSF1Q96T23 1441 aaPredicted RBP7□□□□□ -1.29
LMBR1-212ENST00000448926 RB1CC1Q8TDY2 1594 aa6.96□□□□□ -1.29
LMBR1-212ENST00000448926 MROH2BQ7Z745 1585 aa6.95□□□□□ -1.3
LMBR1-212ENST00000448926 NACADO15069 1562 aa6.94□□□□□ -1.3
LMBR1-212ENST00000448926 WIZO95785 1651 aa6.92□□□□□ -1.3
LMBR1-212ENST00000448926 TRIM41Q8WV44 630 aa6.91□□□□□ -1.3
LMBR1-212ENST00000448926 PCGF6Q9BYE7 350 aa6.9□□□□□ -1.31
LMBR1-212ENST00000448926 PPARGC1BQ86YN6 1023 aaKnown RBP6.87□□□□□ -1.31
LMBR1-212ENST00000448926 UNC13AQ9UPW8 1703 aa6.87□□□□□ -1.31
LMBR1-212ENST00000448926 AEBP2Q6ZN18 517 aaPredicted RBP6.84□□□□□ -1.31
LMBR1-212ENST00000448926 TTBK1Q5TCY1 1321 aaPredicted RBP6.83□□□□□ -1.32
LMBR1-212ENST00000448926 ABCC8Q09428 1581 aa6.78□□□□□ -1.32
LMBR1-212ENST00000448926 BICRAQ9NZM4 1560 aa6.77□□□□□ -1.33
LMBR1-212ENST00000448926 BAZ1AQ9NRL2 1556 aaPredicted RBP6.76□□□□□ -1.33
LMBR1-212ENST00000448926 SMARCA4P51532 1647 aa6.76□□□□□ -1.33
LMBR1-212ENST00000448926 RANGAP1P46060 587 aaPredicted RBP6.75□□□□□ -1.33
LMBR1-212ENST00000448926 CCDC88BA6NC98 1476 aa6.75□□□□□ -1.33
LMBR1-212ENST00000448926 SMARCA2P51531 1590 aa6.7□□□□□ -1.34
LMBR1-212ENST00000448926 TOP2AP11388 1531 aaKnown RBP6.69□□□□□ -1.34
LMBR1-212ENST00000448926 RUSC2Q8N2Y8 1516 aa6.69□□□□□ -1.34
LMBR1-212ENST00000448926 SOGA1O94964 1423 aa6.68□□□□□ -1.34
LMBR1-212ENST00000448926 HRCP23327 699 aa6.67□□□□□ -1.34
LMBR1-212ENST00000448926 UBTFP17480 764 aaKnown RBP6.65□□□□□ -1.35
LMBR1-212ENST00000448926 EIF4G1Q04637 1599 aaKnown RBP6.64□□□□□ -1.35
LMBR1-212ENST00000448926 BAZ1BQ9UIG0 1483 aaKnown RBP6.63□□□□□ -1.35
LMBR1-212ENST00000448926 ATAD2BQ9ULI0 1458 aa6.63□□□□□ -1.35
LMBR1-212ENST00000448926 TRIM26Q12899 539 aaPredicted RBP6.62□□□□□ -1.35
LMBR1-212ENST00000448926 DNAJC5BQ9UF47 199 aa6.59□□□□□ -1.35
LMBR1-212ENST00000448926 SYNJ1O43426 1573 aa6.58□□□□□ -1.36
LMBR1-212ENST00000448926 WRNQ14191 1432 aaPredicted RBP eCLIP6.58□□□□□ -1.36
LMBR1-212ENST00000448926 CSRNP3Q8WYN3 585 aa6.57□□□□□ -1.36
LMBR1-212ENST00000448926 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.57□□□□□ -1.36
LMBR1-212ENST00000448926 CEP162Q5TB80 1403 aa6.53□□□□□ -1.36
LMBR1-212ENST00000448926 PEG3Q9GZU2 1588 aa6.51□□□□□ -1.37
LMBR1-212ENST00000448926 RAPGEF2Q9Y4G8 1499 aa6.49□□□□□ -1.37
LMBR1-212ENST00000448926 HNRNPUL2Q1KMD3 747 aaKnown RBP6.49□□□□□ -1.37
LMBR1-212ENST00000448926 NESP48681 1621 aa6.47□□□□□ -1.37
LMBR1-212ENST00000448926 CC2D2AQ9P2K1 1620 aa6.47□□□□□ -1.37
LMBR1-212ENST00000448926 CCER1Q8TC90 406 aaPredicted RBP6.47□□□□□ -1.37
LMBR1-212ENST00000448926 P3H3Q8IVL6 736 aa6.46□□□□□ -1.37
LMBR1-212ENST00000448926 NCAPD3P42695 1498 aa6.46□□□□□ -1.38
LMBR1-212ENST00000448926 CUX1P39880 1505 aa6.45□□□□□ -1.38
LMBR1-212ENST00000448926 GOLGA3Q08378 1498 aa6.45□□□□□ -1.38
LMBR1-212ENST00000448926 TNIKQ9UKE5 1360 aa6.45□□□□□ -1.38
LMBR1-212ENST00000448926 ATP1B4Q9UN42 357 aaPredicted RBP6.44□□□□□ -1.38
LMBR1-212ENST00000448926 CLIP1P30622 1438 aa6.44□□□□□ -1.38
LMBR1-212ENST00000448926 ITGAEP38570 1179 aa6.43□□□□□ -1.38
LMBR1-212ENST00000448926 TOP2BQ02880 1626 aa6.41□□□□□ -1.38
LMBR1-212ENST00000448926 HMGXB3Q12766 1538 aa6.41□□□□□ -1.38
LMBR1-212ENST00000448926 CEP164Q9UPV0 1460 aa6.41□□□□□ -1.38
LMBR1-212ENST00000448926 CFTRP13569 1480 aa6.4□□□□□ -1.38
LMBR1-212ENST00000448926 APLP2Q06481 763 aa6.4□□□□□ -1.38
LMBR1-212ENST00000448926 KANK4Q5T7N3 995 aaPredicted RBP6.4□□□□□ -1.38
LMBR1-212ENST00000448926 CUX2O14529 1486 aa6.4□□□□□ -1.38
LMBR1-212ENST00000448926 RAD54L2Q9Y4B4 1467 aa6.4□□□□□ -1.38
LMBR1-212ENST00000448926 CADPSQ9ULU8 1353 aa6.39□□□□□ -1.39
LMBR1-212ENST00000448926 EEA1Q15075 1411 aa6.39□□□□□ -1.39
LMBR1-212ENST00000448926 ARID3CA6NKF2 412 aa6.37□□□□□ -1.39
LMBR1-212ENST00000448926 FGD5Q6ZNL6 1462 aa6.37□□□□□ -1.39
LMBR1-212ENST00000448926 BIVM-ERCC5R4GMW8 1640 aa6.36□□□□□ -1.39
LMBR1-212ENST00000448926 FANCD2Q9BXW9 1451 aa6.36□□□□□ -1.39
LMBR1-212ENST00000448926 KIF27Q86VH2 1401 aa6.36□□□□□ -1.39
LMBR1-212ENST00000448926 KIF21BO75037 1637 aa6.36□□□□□ -1.39
LMBR1-212ENST00000448926 TDRD9Q8NDG6 1382 aaKnown RBP6.35□□□□□ -1.39
LMBR1-212ENST00000448926 ARAP1Q96P48 1450 aa6.35□□□□□ -1.39
LMBR1-212ENST00000448926 VPS8Q8N3P4 1428 aa6.34□□□□□ -1.39
LMBR1-212ENST00000448926 IGF1RP08069 1367 aa6.33□□□□□ -1.4
LMBR1-212ENST00000448926 PRXQ9BXM0 1461 aa6.33□□□□□ -1.4
LMBR1-212ENST00000448926 CARMIL1Q5VZK9 1371 aa6.32□□□□□ -1.4
LMBR1-212ENST00000448926 ZEB1P37275 1124 aaPredicted RBP6.31□□□□□ -1.4
LMBR1-212ENST00000448926 PHF23Q9BUL5 403 aaPredicted RBP6.3□□□□□ -1.4
LMBR1-212ENST00000448926 POLA1P09884 1462 aaPredicted RBP6.3□□□□□ -1.4
LMBR1-212ENST00000448926 ARHGAP35Q9NRY4 1499 aa6.3□□□□□ -1.4
LMBR1-212ENST00000448926 TOPBP1Q92547 1522 aa6.29□□□□□ -1.4
LMBR1-212ENST00000448926 FHOD3Q2V2M9 1422 aa6.29□□□□□ -1.4
LMBR1-212ENST00000448926 URB2Q14146 1524 aaKnown RBP6.29□□□□□ -1.4
LMBR1-212ENST00000448926 FAM50AQ14320 339 aaKnown RBP6.28□□□□□ -1.4
LMBR1-212ENST00000448926 KIF21AQ7Z4S6 1674 aa6.27□□□□□ -1.41
LMBR1-212ENST00000448926 PRDM2Q13029 1718 aa6.27□□□□□ -1.41
LMBR1-212ENST00000448926 FBLN2P98095 1184 aa6.26□□□□□ -1.41
LMBR1-212ENST00000448926 YTHDC1Q96MU7 727 aaKnown RBP6.26□□□□□ -1.41
LMBR1-212ENST00000448926 AQRO60306 1485 aaKnown RBP eCLIP6.26□□□□□ -1.411e-6■■■■■ 33.8
LMBR1-212ENST00000448926 ERICH3Q5RHP9 1530 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms