RNA–Protein interactions for RNA: ENST00000635616.1

LINC01748-205, Transcript of long intergenic non-protein coding RNA 1748, humanhuman

TSL 5 BASIC

Gene LINC01748, Length 2,143 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01748-205ENST00000635616 AEBP2Q6ZN18 517 aaPredicted RBP20.91■□□□□ 0.94
LINC01748-205ENST00000635616 CHIC1Q5VXU3 224 aa20.14■□□□□ 0.81
LINC01748-205ENST00000635616 PHF23Q9BUL5 403 aaPredicted RBP18.13■□□□□ 0.49
LINC01748-205ENST00000635616 SENP3Q9H4L4 574 aaPredicted RBP17.99■□□□□ 0.47
LINC01748-205ENST00000635616 NISCHQ9Y2I1 1504 aa17.74■□□□□ 0.43
LINC01748-205ENST00000635616 PLPPR3Q6T4P5 718 aa16.73■□□□□ 0.27
LINC01748-205ENST00000635616 FOXD1Q16676 465 aa16.64■□□□□ 0.25
LINC01748-205ENST00000635616 EHMT2Q96KQ7 1210 aa16.51■□□□□ 0.23
LINC01748-205ENST00000635616 KCNA4P22459 653 aa16.16■□□□□ 0.18
LINC01748-205ENST00000635616 ADRA2BP18089 450 aa16.15■□□□□ 0.18
LINC01748-205ENST00000635616 PPP6R1Q9UPN7 881 aa15.74■□□□□ 0.11
LINC01748-205ENST00000635616 CSRNP3Q8WYN3 585 aa15.68■□□□□ 0.1
LINC01748-205ENST00000635616 MSH5O43196 834 aa15.67■□□□□ 0.1
LINC01748-205ENST00000635616 PIAS4Q8N2W9 510 aaPredicted RBP15.64■□□□□ 0.09
LINC01748-205ENST00000635616 CCDC180Q9P1Z9 1646 aa15.49■□□□□ 0.07
LINC01748-205ENST00000635616 SLC4A1APQ9BWU0 796 aaKnown RBP15.37■□□□□ 0.05
LINC01748-205ENST00000635616 SLC24A1O60721 1099 aa15.08■□□□□ 0.01
LINC01748-205ENST00000635616 ZBTB22O15209 634 aa15.03■□□□□ -0
LINC01748-205ENST00000635616 PPP4R3CPQ6ZMV5 832 aa15.02■□□□□ -0
LINC01748-205ENST00000635616 ZCCHC6Q5VYS8 1495 aaKnown RBP15.02□□□□□ -0.01
LINC01748-205ENST00000635616 POTEDQ86YR6 584 aa14.95□□□□□ -0.02
LINC01748-205ENST00000635616 RTN4Q9NQC3 1192 aaKnown RBP14.93□□□□□ -0.02
LINC01748-205ENST00000635616 NPM3O75607 178 aaKnown RBP14.83□□□□□ -0.04
LINC01748-205ENST00000635616 DCAF1Q9Y4B6 1507 aa14.79□□□□□ -0.04
LINC01748-205ENST00000635616 NCBP3Q53F19 620 aaKnown RBP14.63□□□□□ -0.07
LINC01748-205ENST00000635616 MYO15BQ96JP2 1530 aa14.5□□□□□ -0.09
LINC01748-205ENST00000635616 SHROOM4Q9ULL8 1493 aa14.5□□□□□ -0.09
LINC01748-205ENST00000635616 AMER1Q5JTC6 1135 aaPredicted RBP14.46□□□□□ -0.09
LINC01748-205ENST00000635616 SCAF1Q9H7N4 1312 aaKnown RBP14.46□□□□□ -0.1
LINC01748-205ENST00000635616 FOXD4L1Q9NU39 408 aa14.26□□□□□ -0.13
LINC01748-205ENST00000635616 NACADO15069 1562 aa14.25□□□□□ -0.13
LINC01748-205ENST00000635616 DMRT2Q9Y5R5 561 aa14.25□□□□□ -0.13
LINC01748-205ENST00000635616 DCAF8L2P0C7V8 631 aa14.24□□□□□ -0.13
LINC01748-205ENST00000635616 MAPK8IP2Q13387 824 aaPredicted RBP14.23□□□□□ -0.13
LINC01748-205ENST00000635616 CNKSR2Q8WXI2 1034 aa14.2□□□□□ -0.14
LINC01748-205ENST00000635616 ABCC9O60706 1549 aa14.19□□□□□ -0.14
LINC01748-205ENST00000635616 SUPT5HO00267 1087 aaKnown RBP14.11□□□□□ -0.15
LINC01748-205ENST00000635616 SCRIBQ14160 1630 aa14.1□□□□□ -0.15
LINC01748-205ENST00000635616 FKBP8Q14318 412 aa14.06□□□□□ -0.16
LINC01748-205ENST00000635616 RB1CC1Q8TDY2 1594 aa14.04□□□□□ -0.16
LINC01748-205ENST00000635616 RSF1Q96T23 1441 aaPredicted RBP13.82□□□□□ -0.2
LINC01748-205ENST00000635616 SLC4A2P04920 1241 aa13.81□□□□□ -0.2
LINC01748-205ENST00000635616 HOXD11P31277 338 aaPredicted RBP13.76□□□□□ -0.21
LINC01748-205ENST00000635616 DNAJC5BQ9UF47 199 aa13.75□□□□□ -0.21
LINC01748-205ENST00000635616 UNC13AQ9UPW8 1703 aa13.75□□□□□ -0.21
LINC01748-205ENST00000635616 BAZ1AQ9NRL2 1556 aaPredicted RBP13.74□□□□□ -0.21
LINC01748-205ENST00000635616 RNF216Q9NWF9 866 aaPredicted RBP13.73□□□□□ -0.21
LINC01748-205ENST00000635616 PRKCSHP14314 528 aaPredicted RBP13.68□□□□□ -0.22
LINC01748-205ENST00000635616 DCAF8L1A6NGE4 600 aa13.66□□□□□ -0.22
LINC01748-205ENST00000635616 MROH2BQ7Z745 1585 aa13.65□□□□□ -0.22
LINC01748-205ENST00000635616 CECR2Q9BXF3 1484 aa13.62□□□□□ -0.23
LINC01748-205ENST00000635616 SMARCA4P51532 1647 aa13.61□□□□□ -0.23
LINC01748-205ENST00000635616 WIZO95785 1651 aa13.59□□□□□ -0.23
LINC01748-205ENST00000635616 TOP2AP11388 1531 aaKnown RBP13.55□□□□□ -0.24
LINC01748-205ENST00000635616 BICRAQ9NZM4 1560 aa13.51□□□□□ -0.25
LINC01748-205ENST00000635616 EIF4G1Q04637 1599 aaKnown RBP13.49□□□□□ -0.25
LINC01748-205ENST00000635616 PEG3Q9GZU2 1588 aa13.47□□□□□ -0.25
LINC01748-205ENST00000635616 PLCB2Q00722 1185 aa13.47□□□□□ -0.25
LINC01748-205ENST00000635616 ATF5Q9Y2D1 282 aaPredicted RBP13.47□□□□□ -0.25
LINC01748-205ENST00000635616 MYCNP04198 464 aaPredicted RBP13.43□□□□□ -0.26
LINC01748-205ENST00000635616 ATXN8OSP0DMR3 200 aa13.42□□□□□ -0.26
LINC01748-205ENST00000635616 SMARCA2P51531 1590 aa13.39□□□□□ -0.27
LINC01748-205ENST00000635616 HAP1P54257 671 aaPredicted RBP13.36□□□□□ -0.27
LINC01748-205ENST00000635616 TRIM41Q8WV44 630 aa13.34□□□□□ -0.27
LINC01748-205ENST00000635616 CACNB1Q02641 598 aaPredicted RBP13.32□□□□□ -0.28
LINC01748-205ENST00000635616 RNF39Q9H2S5 420 aa13.3□□□□□ -0.28
LINC01748-205ENST00000635616 CCDC88BA6NC98 1476 aa13.29□□□□□ -0.28
LINC01748-205ENST00000635616 TAOK2Q9UL54 1235 aa13.27□□□□□ -0.29
LINC01748-205ENST00000635616 ATAD2BQ9ULI0 1458 aa13.22□□□□□ -0.29
LINC01748-205ENST00000635616 BAZ1BQ9UIG0 1483 aaKnown RBP13.2□□□□□ -0.3
LINC01748-205ENST00000635616 HMGXB3Q12766 1538 aa13.19□□□□□ -0.3
LINC01748-205ENST00000635616 EEA1Q15075 1411 aa13.18□□□□□ -0.3
LINC01748-205ENST00000635616 C1QBPQ07021 282 aaKnown RBP13.18□□□□□ -0.3
LINC01748-205ENST00000635616 BCANQ96GW7 911 aa13.16□□□□□ -0.3
LINC01748-205ENST00000635616 PABPN1Q86U42 306 aaKnown RBP eCLIP13.16□□□□□ -0.3
LINC01748-205ENST00000635616 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.16□□□□□ -0.3
LINC01748-205ENST00000635616 TPRNQ4KMQ1 711 aa13.13□□□□□ -0.31
LINC01748-205ENST00000635616 ABCC8Q09428 1581 aa13.12□□□□□ -0.31
LINC01748-205ENST00000635616 LOC105371045A0A1W2PR82 267 aa13.12□□□□□ -0.31
LINC01748-205ENST00000635616 KDM2AQ9Y2K7 1162 aa13.08□□□□□ -0.32
LINC01748-205ENST00000635616 FBLN2P98095 1184 aa13.07□□□□□ -0.32
LINC01748-205ENST00000635616 NCAPD3P42695 1498 aa13.06□□□□□ -0.32
LINC01748-205ENST00000635616 WRNQ14191 1432 aaPredicted RBP eCLIP13.05□□□□□ -0.32
LINC01748-205ENST00000635616 PRDM2Q13029 1718 aa13.04□□□□□ -0.32
LINC01748-205ENST00000635616 TRIM26Q12899 539 aaPredicted RBP13.01□□□□□ -0.33
LINC01748-205ENST00000635616 HRCP23327 699 aa13.01□□□□□ -0.33
LINC01748-205ENST00000635616 BIVM-ERCC5R4GMW8 1640 aa13.01□□□□□ -0.33
LINC01748-205ENST00000635616 IFNLR1Q8IU57 520 aaPredicted RBP13□□□□□ -0.33
LINC01748-205ENST00000635616 KIF21BO75037 1637 aa12.99□□□□□ -0.33
LINC01748-205ENST00000635616 SYNJ1O43426 1573 aa12.99□□□□□ -0.33
LINC01748-205ENST00000635616 PKD2Q13563 968 aa12.98□□□□□ -0.33
LINC01748-205ENST00000635616 TOP2BQ02880 1626 aa12.98□□□□□ -0.33
LINC01748-205ENST00000635616 PCGF6Q9BYE7 350 aa12.98□□□□□ -0.33
LINC01748-205ENST00000635616 FAM9AQ8IZU1 332 aaPredicted RBP12.97□□□□□ -0.33
LINC01748-205ENST00000635616 GOLGA3Q08378 1498 aa12.96□□□□□ -0.34
LINC01748-205ENST00000635616 VASPP50552 380 aaPredicted RBP12.94□□□□□ -0.34
LINC01748-205ENST00000635616 TNIKQ9UKE5 1360 aa12.93□□□□□ -0.34
LINC01748-205ENST00000635616 CEP164Q9UPV0 1460 aa12.92□□□□□ -0.34
LINC01748-205ENST00000635616 VSIG10Q8N0Z9 540 aa12.92□□□□□ -0.34
LINC01748-205ENST00000635616 SOGA1O94964 1423 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms