Protein–RNA interactions for Protein: Q9BV44

THUMPD3, THUMP domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3Q9BV44 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
THUMPD3Q9BV44 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
THUMPD3Q9BV44 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
THUMPD3Q9BV44 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
THUMPD3Q9BV44 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
THUMPD3Q9BV44 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
THUMPD3Q9BV44 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
THUMPD3Q9BV44 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
THUMPD3Q9BV44 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
THUMPD3Q9BV44 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
THUMPD3Q9BV44 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
THUMPD3Q9BV44 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
THUMPD3Q9BV44 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.84■□□□□ 0.61
THUMPD3Q9BV44 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.84■□□□□ 0.61
THUMPD3Q9BV44 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
THUMPD3Q9BV44 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.84■□□□□ 0.61
THUMPD3Q9BV44 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
THUMPD3Q9BV44 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC18.84■□□□□ 0.61
THUMPD3Q9BV44 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
THUMPD3Q9BV44 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
THUMPD3Q9BV44 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.84■□□□□ 0.61
THUMPD3Q9BV44 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.84■□□□□ 0.61
THUMPD3Q9BV44 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC18.84■□□□□ 0.61
THUMPD3Q9BV44 CASP6-205ENST00000505486 538 ntTSL 4 BASIC18.84■□□□□ 0.61
THUMPD3Q9BV44 AC022517.1-201ENST00000592429 346 ntBASIC18.84■□□□□ 0.61
THUMPD3Q9BV44 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
THUMPD3Q9BV44 AC010536.3-201ENST00000620306 533 ntBASIC18.84■□□□□ 0.61
THUMPD3Q9BV44 WWOX-218ENST00000627394 894 ntTSL 5 BASIC18.84■□□□□ 0.61
THUMPD3Q9BV44 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
THUMPD3Q9BV44 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
THUMPD3Q9BV44 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
THUMPD3Q9BV44 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
THUMPD3Q9BV44 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
THUMPD3Q9BV44 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
THUMPD3Q9BV44 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
THUMPD3Q9BV44 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.61
THUMPD3Q9BV44 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
THUMPD3Q9BV44 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
THUMPD3Q9BV44 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
THUMPD3Q9BV44 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
THUMPD3Q9BV44 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
THUMPD3Q9BV44 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.83■□□□□ 0.61
THUMPD3Q9BV44 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC18.83■□□□□ 0.61
THUMPD3Q9BV44 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
THUMPD3Q9BV44 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
THUMPD3Q9BV44 ME3-201ENST00000323418 1068 ntTSL 5 BASIC18.83■□□□□ 0.6
THUMPD3Q9BV44 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
THUMPD3Q9BV44 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
THUMPD3Q9BV44 TERF1P5-201ENST00000477545 1207 ntBASIC18.83■□□□□ 0.6
THUMPD3Q9BV44 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC18.83■□□□□ 0.6
THUMPD3Q9BV44 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
THUMPD3Q9BV44 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.83■□□□□ 0.6
THUMPD3Q9BV44 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
THUMPD3Q9BV44 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
THUMPD3Q9BV44 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
THUMPD3Q9BV44 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
THUMPD3Q9BV44 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC18.83■□□□□ 0.6
THUMPD3Q9BV44 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
THUMPD3Q9BV44 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC18.83■□□□□ 0.6
THUMPD3Q9BV44 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
THUMPD3Q9BV44 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
THUMPD3Q9BV44 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.83■□□□□ 0.6
THUMPD3Q9BV44 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC18.82■□□□□ 0.6
THUMPD3Q9BV44 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
THUMPD3Q9BV44 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
THUMPD3Q9BV44 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
THUMPD3Q9BV44 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
THUMPD3Q9BV44 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
THUMPD3Q9BV44 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.82■□□□□ 0.6
THUMPD3Q9BV44 AC009237.14-201ENST00000609975 1594 ntBASIC18.82■□□□□ 0.6
THUMPD3Q9BV44 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC18.82■□□□□ 0.6
THUMPD3Q9BV44 BMP1-204ENST00000397814 836 ntTSL 4 BASIC18.82■□□□□ 0.6
THUMPD3Q9BV44 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
THUMPD3Q9BV44 AC006015.1-201ENST00000429970 570 ntBASIC18.82■□□□□ 0.6
THUMPD3Q9BV44 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC18.82■□□□□ 0.6
THUMPD3Q9BV44 AL591742.1-201ENST00000604433 565 ntBASIC18.82■□□□□ 0.6
THUMPD3Q9BV44 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC18.82■□□□□ 0.6
THUMPD3Q9BV44 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
THUMPD3Q9BV44 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
THUMPD3Q9BV44 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
THUMPD3Q9BV44 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
THUMPD3Q9BV44 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
THUMPD3Q9BV44 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
THUMPD3Q9BV44 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
THUMPD3Q9BV44 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.82■□□□□ 0.6
THUMPD3Q9BV44 Z82202.1-201ENST00000623446 1880 ntBASIC18.82■□□□□ 0.6
THUMPD3Q9BV44 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
THUMPD3Q9BV44 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.82■□□□□ 0.6
THUMPD3Q9BV44 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
THUMPD3Q9BV44 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
THUMPD3Q9BV44 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
THUMPD3Q9BV44 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.81■□□□□ 0.6
THUMPD3Q9BV44 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
THUMPD3Q9BV44 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
THUMPD3Q9BV44 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
THUMPD3Q9BV44 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
THUMPD3Q9BV44 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
THUMPD3Q9BV44 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
THUMPD3Q9BV44 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
THUMPD3Q9BV44 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms