Protein–RNA interactions for Protein: Q9BRL7

SEC22C, Vesicle-trafficking protein SEC22c, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22CQ9BRL7 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC16.68■□□□□ 0.26
SEC22CQ9BRL7 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SEC22CQ9BRL7 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SEC22CQ9BRL7 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
SEC22CQ9BRL7 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SEC22CQ9BRL7 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
SEC22CQ9BRL7 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
SEC22CQ9BRL7 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
SEC22CQ9BRL7 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SEC22CQ9BRL7 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SEC22CQ9BRL7 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
SEC22CQ9BRL7 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SEC22CQ9BRL7 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
SEC22CQ9BRL7 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SEC22CQ9BRL7 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SEC22CQ9BRL7 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SEC22CQ9BRL7 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC16.68■□□□□ 0.26
SEC22CQ9BRL7 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC16.68■□□□□ 0.26
SEC22CQ9BRL7 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SEC22CQ9BRL7 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
SEC22CQ9BRL7 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SEC22CQ9BRL7 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.67■□□□□ 0.26
SEC22CQ9BRL7 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SEC22CQ9BRL7 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
SEC22CQ9BRL7 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SEC22CQ9BRL7 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
SEC22CQ9BRL7 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC16.67■□□□□ 0.26
SEC22CQ9BRL7 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC16.67■□□□□ 0.26
SEC22CQ9BRL7 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
SEC22CQ9BRL7 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SEC22CQ9BRL7 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC16.67■□□□□ 0.26
SEC22CQ9BRL7 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SEC22CQ9BRL7 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16.67■□□□□ 0.26
SEC22CQ9BRL7 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SEC22CQ9BRL7 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
SEC22CQ9BRL7 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
SEC22CQ9BRL7 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC16.67■□□□□ 0.26
SEC22CQ9BRL7 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC16.67■□□□□ 0.26
SEC22CQ9BRL7 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC16.67■□□□□ 0.26
SEC22CQ9BRL7 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SEC22CQ9BRL7 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SEC22CQ9BRL7 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC16.67■□□□□ 0.26
SEC22CQ9BRL7 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SEC22CQ9BRL7 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SEC22CQ9BRL7 AC005224.4-201ENST00000583262 1652 ntBASIC16.66■□□□□ 0.26
SEC22CQ9BRL7 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
SEC22CQ9BRL7 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SEC22CQ9BRL7 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SEC22CQ9BRL7 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC16.66■□□□□ 0.26
SEC22CQ9BRL7 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC16.66■□□□□ 0.26
SEC22CQ9BRL7 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SEC22CQ9BRL7 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC16.66■□□□□ 0.26
SEC22CQ9BRL7 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC16.66■□□□□ 0.26
SEC22CQ9BRL7 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC16.66■□□□□ 0.26
SEC22CQ9BRL7 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC16.66■□□□□ 0.26
SEC22CQ9BRL7 AC092171.4-201ENST00000609130 632 ntBASIC16.66■□□□□ 0.26
SEC22CQ9BRL7 RARRES2P11-201ENST00000635158 484 ntBASIC16.66■□□□□ 0.26
SEC22CQ9BRL7 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SEC22CQ9BRL7 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SEC22CQ9BRL7 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SEC22CQ9BRL7 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC16.66■□□□□ 0.26
SEC22CQ9BRL7 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
SEC22CQ9BRL7 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SEC22CQ9BRL7 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
SEC22CQ9BRL7 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
SEC22CQ9BRL7 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
SEC22CQ9BRL7 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
SEC22CQ9BRL7 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SEC22CQ9BRL7 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SEC22CQ9BRL7 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC16.66■□□□□ 0.26
SEC22CQ9BRL7 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC16.66■□□□□ 0.26
SEC22CQ9BRL7 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
SEC22CQ9BRL7 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
SEC22CQ9BRL7 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SEC22CQ9BRL7 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SEC22CQ9BRL7 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC16.65■□□□□ 0.26
SEC22CQ9BRL7 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SEC22CQ9BRL7 AL139384.1-201ENST00000612143 3047 ntBASIC16.65■□□□□ 0.26
SEC22CQ9BRL7 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SEC22CQ9BRL7 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SEC22CQ9BRL7 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
SEC22CQ9BRL7 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
SEC22CQ9BRL7 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SEC22CQ9BRL7 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.65■□□□□ 0.26
SEC22CQ9BRL7 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC16.65■□□□□ 0.26
SEC22CQ9BRL7 AC239859.2-201ENST00000444165 318 ntBASIC16.65■□□□□ 0.26
SEC22CQ9BRL7 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC16.65■□□□□ 0.26
SEC22CQ9BRL7 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC16.65■□□□□ 0.26
SEC22CQ9BRL7 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SEC22CQ9BRL7 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC16.65■□□□□ 0.26
SEC22CQ9BRL7 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SEC22CQ9BRL7 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SEC22CQ9BRL7 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SEC22CQ9BRL7 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
SEC22CQ9BRL7 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
SEC22CQ9BRL7 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SEC22CQ9BRL7 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
SEC22CQ9BRL7 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
SEC22CQ9BRL7 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
SEC22CQ9BRL7 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms