Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
COL23A1Q86Y22 FXN-203ENST00000396366 922 ntTSL 2 BASIC24.95■■□□□ 1.58
COL23A1Q86Y22 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC24.95■■□□□ 1.58
COL23A1Q86Y22 TSPY17P-201ENST00000450329 467 ntBASIC24.95■■□□□ 1.58
COL23A1Q86Y22 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
COL23A1Q86Y22 GXYLT1P6-201ENST00000456472 1187 ntBASIC24.95■■□□□ 1.58
COL23A1Q86Y22 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC24.95■■□□□ 1.58
COL23A1Q86Y22 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC24.95■■□□□ 1.58
COL23A1Q86Y22 AL136038.3-201ENST00000561909 1096 ntBASIC24.95■■□□□ 1.58
COL23A1Q86Y22 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC24.95■■□□□ 1.58
COL23A1Q86Y22 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
COL23A1Q86Y22 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC24.95■■□□□ 1.58
COL23A1Q86Y22 DFFB-212ENST00000625756 649 ntTSL 5 BASIC24.95■■□□□ 1.58
COL23A1Q86Y22 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC24.95■■□□□ 1.58
COL23A1Q86Y22 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC24.95■■□□□ 1.58
COL23A1Q86Y22 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC24.95■■□□□ 1.58
COL23A1Q86Y22 TUB-203ENST00000534099 1759 ntTSL 2 BASIC24.95■■□□□ 1.58
COL23A1Q86Y22 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC24.95■■□□□ 1.58
COL23A1Q86Y22 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC24.95■■□□□ 1.58
COL23A1Q86Y22 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC24.95■■□□□ 1.58
COL23A1Q86Y22 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
COL23A1Q86Y22 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
COL23A1Q86Y22 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
COL23A1Q86Y22 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
COL23A1Q86Y22 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC24.94■■□□□ 1.58
COL23A1Q86Y22 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
COL23A1Q86Y22 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC24.94■■□□□ 1.58
COL23A1Q86Y22 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC24.94■■□□□ 1.58
COL23A1Q86Y22 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
COL23A1Q86Y22 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC24.94■■□□□ 1.58
COL23A1Q86Y22 TSPY21P-201ENST00000433481 731 ntBASIC24.94■■□□□ 1.58
COL23A1Q86Y22 TSPY23P-201ENST00000440136 739 ntBASIC24.94■■□□□ 1.58
COL23A1Q86Y22 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
COL23A1Q86Y22 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC24.94■■□□□ 1.58
COL23A1Q86Y22 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
COL23A1Q86Y22 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
COL23A1Q86Y22 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
COL23A1Q86Y22 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
COL23A1Q86Y22 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC24.94■■□□□ 1.58
COL23A1Q86Y22 GOLGA6L3-201ENST00000507199 1679 ntBASIC24.94■■□□□ 1.58
COL23A1Q86Y22 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC24.94■■□□□ 1.58
COL23A1Q86Y22 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
COL23A1Q86Y22 CASK-201ENST00000378154 2494 ntTSL 5 BASIC24.93■■□□□ 1.58
COL23A1Q86Y22 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
COL23A1Q86Y22 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
COL23A1Q86Y22 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC24.93■■□□□ 1.58
COL23A1Q86Y22 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
COL23A1Q86Y22 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
COL23A1Q86Y22 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC24.93■■□□□ 1.58
COL23A1Q86Y22 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC24.93■■□□□ 1.58
COL23A1Q86Y22 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC24.93■■□□□ 1.58
COL23A1Q86Y22 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
COL23A1Q86Y22 VENTXP5-201ENST00000523979 775 ntBASIC24.93■■□□□ 1.58
COL23A1Q86Y22 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC24.93■■□□□ 1.58
COL23A1Q86Y22 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC24.93■■□□□ 1.58
COL23A1Q86Y22 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC24.93■■□□□ 1.58
COL23A1Q86Y22 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
COL23A1Q86Y22 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC24.93■■□□□ 1.58
COL23A1Q86Y22 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC24.93■■□□□ 1.58
COL23A1Q86Y22 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC24.93■■□□□ 1.58
COL23A1Q86Y22 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC24.93■■□□□ 1.58
COL23A1Q86Y22 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC24.92■■□□□ 1.58
COL23A1Q86Y22 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
COL23A1Q86Y22 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC24.92■■□□□ 1.58
COL23A1Q86Y22 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC24.92■■□□□ 1.58
COL23A1Q86Y22 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC24.92■■□□□ 1.58
COL23A1Q86Y22 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
COL23A1Q86Y22 AC018553.1-201ENST00000616682 1458 ntBASIC24.92■■□□□ 1.58
COL23A1Q86Y22 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
COL23A1Q86Y22 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
COL23A1Q86Y22 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC24.92■■□□□ 1.58
COL23A1Q86Y22 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
COL23A1Q86Y22 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC24.92■■□□□ 1.58
COL23A1Q86Y22 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC24.92■■□□□ 1.58
COL23A1Q86Y22 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC24.92■■□□□ 1.58
COL23A1Q86Y22 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC24.92■■□□□ 1.58
COL23A1Q86Y22 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC24.92■■□□□ 1.58
COL23A1Q86Y22 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC24.92■■□□□ 1.58
COL23A1Q86Y22 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
COL23A1Q86Y22 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC24.91■■□□□ 1.58
COL23A1Q86Y22 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
COL23A1Q86Y22 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
COL23A1Q86Y22 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC24.91■■□□□ 1.58
COL23A1Q86Y22 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC24.91■■□□□ 1.58
COL23A1Q86Y22 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC24.91■■□□□ 1.58
COL23A1Q86Y22 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC24.91■■□□□ 1.58
COL23A1Q86Y22 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
COL23A1Q86Y22 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
COL23A1Q86Y22 AP000347.1-202ENST00000435868 847 ntBASIC24.91■■□□□ 1.58
COL23A1Q86Y22 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC24.91■■□□□ 1.58
COL23A1Q86Y22 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC24.91■■□□□ 1.58
COL23A1Q86Y22 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC24.91■■□□□ 1.58
COL23A1Q86Y22 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC24.91■■□□□ 1.58
COL23A1Q86Y22 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC24.91■■□□□ 1.58
COL23A1Q86Y22 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
COL23A1Q86Y22 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
COL23A1Q86Y22 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC24.9■■□□□ 1.58
COL23A1Q86Y22 PVRIG2P-201ENST00000435460 978 ntBASIC24.9■■□□□ 1.58
COL23A1Q86Y22 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC24.9■■□□□ 1.58
COL23A1Q86Y22 SNX5-210ENST00000481323 562 ntTSL 3 BASIC24.9■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms