Protein–RNA interactions for Protein: Q71RC2

LARP4, La-related protein 4, humanhuman

Known RBP eCLIP

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4Q71RC2 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.273e-13■■■□□ 15.2
LARP4Q71RC2 PPT2-EGFL8-206ENST00000583227 1540 ntAPPRIS ALT2 TSL 516.6■□□□□ 0.253e-13■■■□□ 15.2
LARP4Q71RC2 PPT2-EGFL8-203ENST00000428388 2878 ntAPPRIS P5 TSL 216.01■□□□□ 0.153e-13■■■□□ 15.2
LARP4Q71RC2 PPT2-EGFL8-204ENST00000453656 1327 ntTSL 215.57■□□□□ 0.083e-13■■■□□ 15.2
LARP4Q71RC2 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.153e-13■■■□□ 15.2
LARP4Q71RC2 PPT2-EGFL8-202ENST00000422437 4181 ntAPPRIS P5 TSL 5 BASIC13.13□□□□□ -0.313e-13■■■□□ 15.2
LARP4Q71RC2 PPT2-EGFL8-205ENST00000479001 944 ntTSL 510.41□□□□□ -0.743e-13■■■□□ 15.2
LARP4Q71RC2 ATP6V1E1-203ENST00000399798 994 ntTSL 2 BASIC6.23□□□□□ -1.411e-8■■■□□ 15.2
LARP4Q71RC2 C12orf57-203ENST00000538392 979 ntTSL 217.22■□□□□ 0.353e-9■■■□□ 15.2
LARP4Q71RC2 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC13.25□□□□□ -0.293e-9■■■□□ 15.2
LARP4Q71RC2 HDGF-208ENST00000482651 966 ntTSL 38.09□□□□□ -1.115e-9■■■□□ 15.2
LARP4Q71RC2 PPP4C-208ENST00000564966 1122 ntTSL 223.1■■□□□ 1.291e-6■■■□□ 15.1
LARP4Q71RC2 PPP4C-213ENST00000568810 1080 ntTSL 222.64■■□□□ 1.211e-6■■■□□ 15.1
LARP4Q71RC2 PPP4C-206ENST00000563597 815 ntTSL 322.64■■□□□ 1.211e-6■■■□□ 15.1
LARP4Q71RC2 PPP4C-203ENST00000562222 742 ntTSL 321.56■■□□□ 1.041e-6■■■□□ 15.1
LARP4Q71RC2 PPP4C-207ENST00000563732 846 ntTSL 219.6■□□□□ 0.731e-6■■■□□ 15.1
LARP4Q71RC2 PPP4C-210ENST00000567040 879 ntTSL 215.94■□□□□ 0.141e-6■■■□□ 15.1
LARP4Q71RC2 BCAP31-206ENST00000442093 793 ntTSL 221.15■□□□□ 0.982e-10■■■□□ 15.1
LARP4Q71RC2 BCAP31-204ENST00000429550 684 ntTSL 318.86■□□□□ 0.612e-10■■■□□ 15.1
LARP4Q71RC2 BCAP31-202ENST00000416815 688 ntTSL 516.95■□□□□ 0.32e-10■■■□□ 15.1
LARP4Q71RC2 BCAP31-203ENST00000423827 669 ntTSL 513.47□□□□□ -0.252e-10■■■□□ 15.1
LARP4Q71RC2 DHRS2-204ENST00000553600 844 ntTSL 213.88□□□□□ -0.193e-24■■■□□ 15.1
LARP4Q71RC2 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC13.73□□□□□ -0.215e-12■■■□□ 15.1
LARP4Q71RC2 CD59-205ENST00000437761 758 ntAPPRIS P2 TSL 4 BASIC11.05□□□□□ -0.645e-12■■■□□ 15.1
LARP4Q71RC2 CD59-214ENST00000534312 572 ntAPPRIS ALT2 TSL 3 BASIC9.6□□□□□ -0.875e-12■■■□□ 15.1
LARP4Q71RC2 CD59-207ENST00000525763 789 ntTSL 39.45□□□□□ -0.95e-12■■■□□ 15.1
LARP4Q71RC2 CD59-213ENST00000533403 1847 ntTSL 3 BASIC9.19□□□□□ -0.945e-12■■■□□ 15.1
LARP4Q71RC2 CD59-203ENST00000415002 1878 ntAPPRIS P2 TSL 1 (best) BASIC9.11□□□□□ -0.955e-12■■■□□ 15.1
LARP4Q71RC2 CD59-208ENST00000527577 686 ntAPPRIS P2 TSL 3 BASIC9.01□□□□□ -0.975e-12■■■□□ 15.1
LARP4Q71RC2 CD59-202ENST00000395850 1889 ntAPPRIS P2 TSL 1 (best) BASIC8.92□□□□□ -0.985e-12■■■□□ 15.1
LARP4Q71RC2 CD59-204ENST00000426650 741 ntAPPRIS P2 TSL 3 BASIC8.33□□□□□ -1.085e-12■■■□□ 15.1
LARP4Q71RC2 CD59-209ENST00000527926 633 ntTSL 38.24□□□□□ -1.095e-12■■■□□ 15.1
LARP4Q71RC2 CD59-206ENST00000445143 825 ntAPPRIS P2 TSL 3 BASIC7.57□□□□□ -1.25e-12■■■□□ 15.1
LARP4Q71RC2 DDX39A-206ENST00000587730 1813 ntTSL 1 (best)18.66■□□□□ 0.585e-6■■■□□ 15.1
LARP4Q71RC2 DDX39A-209ENST00000589318 1903 ntTSL 1 (best)15□□□□□ -0.015e-6■■■□□ 15.1
LARP4Q71RC2 DDX39A-208ENST00000588692 1478 ntTSL 513.18□□□□□ -0.35e-6■■■□□ 15.1
LARP4Q71RC2 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.425e-6■■■□□ 15.1
LARP4Q71RC2 DDX39A-202ENST00000324340 1355 ntTSL 1 (best)12.3□□□□□ -0.445e-6■■■□□ 15.1
LARP4Q71RC2 JPT1-204ENST00000465454 509 ntTSL 411.66□□□□□ -0.541e-9■■■□□ 15.1
LARP4Q71RC2 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.348e-7■■■□□ 15.1
LARP4Q71RC2 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC14.64□□□□□ -0.078e-7■■■□□ 15.1
LARP4Q71RC2 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.137e-7■■■□□ 15.1
LARP4Q71RC2 AC087289.3-201ENST00000590947 1886 ntAPPRIS ALT2 TSL 216.98■□□□□ 0.317e-7■■■□□ 15.1
LARP4Q71RC2 MRPL38-212ENST00000486101 767 ntTSL 211.05□□□□□ -0.647e-7■■■□□ 15.1
LARP4Q71RC2 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.782e-8■■■□□ 15.1
LARP4Q71RC2 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.742e-8■■■□□ 15.1
LARP4Q71RC2 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC16.48■□□□□ 0.232e-8■■■□□ 15.1
LARP4Q71RC2 EIF6-205ENST00000440766 798 ntTSL 214.92□□□□□ -0.022e-8■■■□□ 15.1
LARP4Q71RC2 EIF6-206ENST00000447927 932 ntTSL 1 (best)14.92□□□□□ -0.022e-8■■■□□ 15.1
LARP4Q71RC2 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.052e-8■■■□□ 15.1
LARP4Q71RC2 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.122e-8■■■□□ 15.1
LARP4Q71RC2 CHCHD2-202ENST00000473095 694 ntTSL 1 (best)12.01□□□□□ -0.495e-8■■■□□ 15.1
LARP4Q71RC2 MKI67-205ENST00000484853 733 ntTSL 26.79□□□□□ -1.322e-6■■■□□ 15.1
LARP4Q71RC2 TNNI2-201ENST00000252898 678 ntAPPRIS P3 TSL 3 BASIC12.44□□□□□ -0.426e-7■■■□□ 15.1
LARP4Q71RC2 TNNI2-202ENST00000381905 706 ntAPPRIS ALT1 TSL 3 BASIC12.44□□□□□ -0.426e-7■■■□□ 15.1
LARP4Q71RC2 TNNI2-203ENST00000381906 745 ntAPPRIS P3 TSL 3 BASIC12.44□□□□□ -0.426e-7■■■□□ 15.1
LARP4Q71RC2 TNNI2-204ENST00000381911 743 ntAPPRIS P3 TSL 2 BASIC12.44□□□□□ -0.426e-7■■■□□ 15.1
LARP4Q71RC2 TNNI2-206ENST00000617947 699 ntAPPRIS ALT1 TSL 5 BASIC11.41□□□□□ -0.586e-7■■■□□ 15.1
LARP4Q71RC2 AAMP-208ENST00000475678 2270 ntTSL 216.65■□□□□ 0.264e-7■■■□□ 15.1
LARP4Q71RC2 AAMP-209ENST00000489767 1833 ntTSL 516.22■□□□□ 0.194e-7■■■□□ 15.1
LARP4Q71RC2 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.054e-7■■■□□ 15.1
LARP4Q71RC2 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC14.45□□□□□ -0.14e-7■■■□□ 15.1
LARP4Q71RC2 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.224e-7■■■□□ 15.1
LARP4Q71RC2 PSMA7-205ENST00000484488 1023 ntTSL 321.53■■□□□ 1.042e-9■■■□□ 15.1
LARP4Q71RC2 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.272e-16■■■□□ 15.1
LARP4Q71RC2 SERPINF1-208ENST00000572517 672 ntTSL 210.54□□□□□ -0.722e-16■■■□□ 15.1
LARP4Q71RC2 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.062e-31■■■□□ 15.1
LARP4Q71RC2 SERPINA3-201ENST00000393078 1589 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.542e-31■■■□□ 15.1
LARP4Q71RC2 SERPINA3-202ENST00000393080 1581 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.562e-31■■■□□ 15.1
LARP4Q71RC2 SERPINA3-204ENST00000482740 2420 ntTSL 1 (best) BASIC11.5□□□□□ -0.572e-31■■■□□ 15.1
LARP4Q71RC2 SERPINA3-208ENST00000556968 1289 ntTSL 1 (best)10.07□□□□□ -0.82e-31■■■□□ 15.1
LARP4Q71RC2 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC24.08■■□□□ 1.452e-10■■■□□ 15.1
LARP4Q71RC2 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.012e-10■■■□□ 15.1
LARP4Q71RC2 PPP2CA-202ENST00000472253 574 ntTSL 28.19□□□□□ -1.12e-10■■■□□ 15.1
LARP4Q71RC2 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.626e-7■■■□□ 15.1
LARP4Q71RC2 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.156e-26■■■□□ 15.1
LARP4Q71RC2 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC13.48□□□□□ -0.256e-26■■■□□ 15.1
LARP4Q71RC2 HBG2-204ENST00000444587 307 ntTSL 2 BASIC6.65□□□□□ -1.343e-32■■■□□ 15.1
LARP4Q71RC2 APOA2-202ENST00000463273 469 ntTSL 1 (best)8.42□□□□□ -1.061e-323■■■□□ 15.1
LARP4Q71RC2 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.021e-9■■■□□ 15.1
LARP4Q71RC2 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.291e-9■■■□□ 15.1
LARP4Q71RC2 CLIC1-209ENST00000395892 1197 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.31e-9■■■□□ 15.1
LARP4Q71RC2 CLIC1-207ENST00000375780 1560 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.641e-9■■■□□ 15.1
LARP4Q71RC2 CLIC1-210ENST00000616760 1098 ntAPPRIS P1 TSL 2 BASIC9.35□□□□□ -0.911e-9■■■□□ 15.1
LARP4Q71RC2 CFL1-215ENST00000534784 737 ntTSL 316.68■□□□□ 0.263e-16■■■□□ 15.1
LARP4Q71RC2 LRCH4-205ENST00000485554 774 ntTSL 316.14■□□□□ 0.174e-6■■■□□ 15
LARP4Q71RC2 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC15.89■□□□□ 0.134e-6■■■□□ 15
LARP4Q71RC2 COX4I1-206ENST00000564544 617 ntTSL 312.23□□□□□ -0.451e-8■■■□□ 15
LARP4Q71RC2 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.052e-6■■■□□ 15
LARP4Q71RC2 ANP32E-206ENST00000534220 512 ntTSL 57.38□□□□□ -1.232e-9■■■□□ 15
LARP4Q71RC2 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC25.75■■□□□ 1.711e-8■■■□□ 15
LARP4Q71RC2 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.011e-8■■■□□ 15
LARP4Q71RC2 SIGMAR1-202ENST00000353468 1582 ntTSL 1 (best)19.3■□□□□ 0.681e-8■■■□□ 15
LARP4Q71RC2 ERGIC3-214ENST00000482338 598 ntTSL 28.5□□□□□ -1.054e-7■■■□□ 15
LARP4Q71RC2 ERGIC3-218ENST00000489071 582 ntTSL 28.21□□□□□ -1.14e-7■■■□□ 15
LARP4Q71RC2 WFS1-201ENST00000226760 3640 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.52e-6■■■□□ 15
LARP4Q71RC2 WFS1-205ENST00000507765 3655 ntTSL 29.26□□□□□ -0.932e-6■■■□□ 15
LARP4Q71RC2 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC24.21■■□□□ 1.471e-8■■■□□ 15
LARP4Q71RC2 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.521e-8■■■□□ 15
LARP4Q71RC2 COX4I1-215ENST00000568339 2271 ntTSL 216.47■□□□□ 0.231e-8■■■□□ 15
Retrieved 100 of 15,922 protein–RNA pairs in 247.5 ms