Protein–RNA interactions for Protein: P61088

UBE2N, Ubiquitin-conjugating enzyme E2 N, humanhuman

Known RBP Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2NP61088 AL121829.2-201ENST00000620908 328 ntBASIC17.36■□□□□ 0.37
UBE2NP61088 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
UBE2NP61088 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC17.36■□□□□ 0.37
UBE2NP61088 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC17.36■□□□□ 0.37
UBE2NP61088 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC17.36■□□□□ 0.37
UBE2NP61088 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
UBE2NP61088 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
UBE2NP61088 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
UBE2NP61088 CD37-204ENST00000535669 1674 ntTSL 2 BASIC17.36■□□□□ 0.37
UBE2NP61088 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
UBE2NP61088 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
UBE2NP61088 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
UBE2NP61088 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
UBE2NP61088 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
UBE2NP61088 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
UBE2NP61088 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
UBE2NP61088 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC17.35■□□□□ 0.37
UBE2NP61088 PRORSD1P-201ENST00000295112 541 ntBASIC17.35■□□□□ 0.37
UBE2NP61088 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
UBE2NP61088 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
UBE2NP61088 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC17.35■□□□□ 0.37
UBE2NP61088 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
UBE2NP61088 C1QBPP2-201ENST00000528754 825 ntBASIC17.35■□□□□ 0.37
UBE2NP61088 PNN-205ENST00000556530 601 ntTSL 2 BASIC17.35■□□□□ 0.37
UBE2NP61088 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC17.35■□□□□ 0.37
UBE2NP61088 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC17.35■□□□□ 0.37
UBE2NP61088 FAM197Y4-202ENST00000622692 608 ntBASIC17.35■□□□□ 0.37
UBE2NP61088 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
UBE2NP61088 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
UBE2NP61088 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
UBE2NP61088 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
UBE2NP61088 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
UBE2NP61088 STK25-204ENST00000405585 1643 ntTSL 2 BASIC17.35■□□□□ 0.37
UBE2NP61088 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
UBE2NP61088 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
UBE2NP61088 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
UBE2NP61088 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
UBE2NP61088 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
UBE2NP61088 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
UBE2NP61088 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC17.35■□□□□ 0.37
UBE2NP61088 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
UBE2NP61088 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
UBE2NP61088 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
UBE2NP61088 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC17.34■□□□□ 0.37
UBE2NP61088 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
UBE2NP61088 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
UBE2NP61088 AC239809.2-201ENST00000415381 517 ntBASIC17.34■□□□□ 0.37
UBE2NP61088 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
UBE2NP61088 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC17.34■□□□□ 0.37
UBE2NP61088 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
UBE2NP61088 AC233263.1-201ENST00000578059 224 ntBASIC17.34■□□□□ 0.37
UBE2NP61088 RN7SL471P-201ENST00000580476 299 ntBASIC17.34■□□□□ 0.37
UBE2NP61088 PHGDH-210ENST00000641115 1638 ntBASIC17.34■□□□□ 0.37
UBE2NP61088 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
UBE2NP61088 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
UBE2NP61088 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC17.33■□□□□ 0.37
UBE2NP61088 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC17.33■□□□□ 0.37
UBE2NP61088 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
UBE2NP61088 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC17.33■□□□□ 0.37
UBE2NP61088 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
UBE2NP61088 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
UBE2NP61088 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
UBE2NP61088 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC17.33■□□□□ 0.37
UBE2NP61088 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC17.33■□□□□ 0.37
UBE2NP61088 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
UBE2NP61088 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
UBE2NP61088 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
UBE2NP61088 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
UBE2NP61088 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
UBE2NP61088 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC17.33■□□□□ 0.36
UBE2NP61088 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC17.33■□□□□ 0.36
UBE2NP61088 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC17.33■□□□□ 0.36
UBE2NP61088 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC17.33■□□□□ 0.36
UBE2NP61088 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC17.33■□□□□ 0.36
UBE2NP61088 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
UBE2NP61088 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
UBE2NP61088 AC142381.4-202ENST00000563973 229 ntBASIC17.33■□□□□ 0.36
UBE2NP61088 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
UBE2NP61088 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
UBE2NP61088 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
UBE2NP61088 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
UBE2NP61088 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC17.33■□□□□ 0.36
UBE2NP61088 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC17.33■□□□□ 0.36
UBE2NP61088 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
UBE2NP61088 LINC01521-201ENST00000504184 1943 ntBASIC17.33■□□□□ 0.36
UBE2NP61088 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
UBE2NP61088 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
UBE2NP61088 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
UBE2NP61088 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
UBE2NP61088 GOLGA2P11-201ENST00000562660 1621 ntBASIC17.32■□□□□ 0.36
UBE2NP61088 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
UBE2NP61088 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
UBE2NP61088 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
UBE2NP61088 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
UBE2NP61088 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
UBE2NP61088 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
UBE2NP61088 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
UBE2NP61088 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
UBE2NP61088 AL158047.1-201ENST00000445918 881 ntBASIC17.32■□□□□ 0.36
UBE2NP61088 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms