Protein–RNA interactions for Protein: P40925

MDH1, Malate dehydrogenase, cytoplasmic, humanhuman

Known RBP Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1P40925 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
MDH1P40925 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
MDH1P40925 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
MDH1P40925 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
MDH1P40925 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
MDH1P40925 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
MDH1P40925 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
MDH1P40925 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
MDH1P40925 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
MDH1P40925 MIR3621-201ENST00000580529 85 ntBASIC19.85■□□□□ 0.77
MDH1P40925 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
MDH1P40925 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
MDH1P40925 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
MDH1P40925 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.85■□□□□ 0.77
MDH1P40925 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
MDH1P40925 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
MDH1P40925 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
MDH1P40925 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
MDH1P40925 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
MDH1P40925 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC19.84■□□□□ 0.77
MDH1P40925 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19.84■□□□□ 0.77
MDH1P40925 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.84■□□□□ 0.77
MDH1P40925 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
MDH1P40925 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
MDH1P40925 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC19.84■□□□□ 0.77
MDH1P40925 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC19.84■□□□□ 0.77
MDH1P40925 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
MDH1P40925 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
MDH1P40925 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
MDH1P40925 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC19.84■□□□□ 0.77
MDH1P40925 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
MDH1P40925 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.84■□□□□ 0.77
MDH1P40925 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
MDH1P40925 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
MDH1P40925 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
MDH1P40925 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC19.83■□□□□ 0.77
MDH1P40925 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
MDH1P40925 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.83■□□□□ 0.77
MDH1P40925 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
MDH1P40925 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
MDH1P40925 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
MDH1P40925 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
MDH1P40925 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
MDH1P40925 QDPR-206ENST00000508623 601 ntTSL 3 BASIC19.83■□□□□ 0.77
MDH1P40925 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
MDH1P40925 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
MDH1P40925 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
MDH1P40925 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.83■□□□□ 0.76
MDH1P40925 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
MDH1P40925 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
MDH1P40925 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
MDH1P40925 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
MDH1P40925 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
MDH1P40925 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
MDH1P40925 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
MDH1P40925 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
MDH1P40925 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC19.83■□□□□ 0.76
MDH1P40925 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC19.82■□□□□ 0.76
MDH1P40925 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
MDH1P40925 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
MDH1P40925 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
MDH1P40925 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
MDH1P40925 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
MDH1P40925 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC19.82■□□□□ 0.76
MDH1P40925 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
MDH1P40925 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
MDH1P40925 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
MDH1P40925 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC19.82■□□□□ 0.76
MDH1P40925 KRT16P3-201ENST00000439127 1283 ntBASIC19.82■□□□□ 0.76
MDH1P40925 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC19.82■□□□□ 0.76
MDH1P40925 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
MDH1P40925 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC19.82■□□□□ 0.76
MDH1P40925 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
MDH1P40925 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
MDH1P40925 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
MDH1P40925 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
MDH1P40925 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC19.82■□□□□ 0.76
MDH1P40925 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
MDH1P40925 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
MDH1P40925 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
MDH1P40925 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
MDH1P40925 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
MDH1P40925 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
MDH1P40925 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19.81■□□□□ 0.76
MDH1P40925 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.81■□□□□ 0.76
MDH1P40925 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
MDH1P40925 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
MDH1P40925 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
MDH1P40925 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
MDH1P40925 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
MDH1P40925 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.81■□□□□ 0.76
MDH1P40925 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC19.81■□□□□ 0.76
MDH1P40925 AL512631.2-201ENST00000604634 923 ntBASIC19.81■□□□□ 0.76
MDH1P40925 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
MDH1P40925 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC19.81■□□□□ 0.76
MDH1P40925 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
MDH1P40925 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
MDH1P40925 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
MDH1P40925 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
MDH1P40925 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms