Protein–RNA interactions for Protein: P40429

RPL13A, 60S ribosomal protein L13a, humanhuman

Known RBP Predictions only

Length 203 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL13AP40429 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
RPL13AP40429 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RPL13AP40429 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
RPL13AP40429 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RPL13AP40429 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
RPL13AP40429 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RPL13AP40429 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RPL13AP40429 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC13.64□□□□□ -0.23
RPL13AP40429 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RPL13AP40429 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
RPL13AP40429 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
RPL13AP40429 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RPL13AP40429 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RPL13AP40429 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
RPL13AP40429 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
RPL13AP40429 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
RPL13AP40429 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
RPL13AP40429 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
RPL13AP40429 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
RPL13AP40429 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
RPL13AP40429 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RPL13AP40429 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RPL13AP40429 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RPL13AP40429 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
RPL13AP40429 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC13.63□□□□□ -0.23
RPL13AP40429 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC13.63□□□□□ -0.23
RPL13AP40429 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC13.63□□□□□ -0.23
RPL13AP40429 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
RPL13AP40429 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
RPL13AP40429 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RPL13AP40429 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
RPL13AP40429 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC13.63□□□□□ -0.23
RPL13AP40429 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RPL13AP40429 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RPL13AP40429 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RPL13AP40429 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
RPL13AP40429 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC13.63□□□□□ -0.23
RPL13AP40429 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
RPL13AP40429 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
RPL13AP40429 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
RPL13AP40429 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RPL13AP40429 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
RPL13AP40429 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
RPL13AP40429 TCF3P1-201ENST00000423021 1937 ntBASIC13.62□□□□□ -0.23
RPL13AP40429 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
RPL13AP40429 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
RPL13AP40429 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC13.62□□□□□ -0.23
RPL13AP40429 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC13.62□□□□□ -0.23
RPL13AP40429 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
RPL13AP40429 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC13.62□□□□□ -0.23
RPL13AP40429 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RPL13AP40429 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
RPL13AP40429 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RPL13AP40429 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
RPL13AP40429 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RPL13AP40429 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
RPL13AP40429 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC13.62□□□□□ -0.23
RPL13AP40429 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC13.62□□□□□ -0.23
RPL13AP40429 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
RPL13AP40429 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
RPL13AP40429 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
RPL13AP40429 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RPL13AP40429 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
RPL13AP40429 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
RPL13AP40429 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
RPL13AP40429 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
RPL13AP40429 AP004607.7-201ENST00000527152 1677 ntBASIC13.62□□□□□ -0.23
RPL13AP40429 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RPL13AP40429 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RPL13AP40429 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC13.62□□□□□ -0.23
RPL13AP40429 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
RPL13AP40429 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC13.62□□□□□ -0.23
RPL13AP40429 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC13.62□□□□□ -0.23
RPL13AP40429 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RPL13AP40429 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC13.62□□□□□ -0.23
RPL13AP40429 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RPL13AP40429 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
RPL13AP40429 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
RPL13AP40429 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
RPL13AP40429 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC13.61□□□□□ -0.23
RPL13AP40429 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC13.61□□□□□ -0.23
RPL13AP40429 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC13.61□□□□□ -0.23
RPL13AP40429 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
RPL13AP40429 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC13.61□□□□□ -0.23
RPL13AP40429 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RPL13AP40429 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RPL13AP40429 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RPL13AP40429 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RPL13AP40429 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC13.61□□□□□ -0.23
RPL13AP40429 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RPL13AP40429 TRIR-202ENST00000588213 841 ntTSL 3 BASIC13.61□□□□□ -0.23
RPL13AP40429 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RPL13AP40429 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RPL13AP40429 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC13.61□□□□□ -0.23
RPL13AP40429 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
RPL13AP40429 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC13.61□□□□□ -0.23
RPL13AP40429 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC13.61□□□□□ -0.23
RPL13AP40429 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC13.61□□□□□ -0.23
RPL13AP40429 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
RPL13AP40429 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms