Protein–RNA interactions for Protein: P23396

RPS3, 40S ribosomal protein S3, humanhuman

Known RBP eCLIP

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3P23396 SHISA5-212ENST00000465449 1739 ntTSL 217.54■□□□□ 0.44e-6■■■■□ 22.8
RPS3P23396 SHISA5-202ENST00000415268 556 ntTSL 417.24■□□□□ 0.354e-6■■■■□ 22.8
RPS3P23396 EIF2B3-208ENST00000487532 753 ntTSL 417.17■□□□□ 0.344e-6■■■■□ 22.8
RPS3P23396 EIF2B3-209ENST00000497010 561 ntTSL 317.17■□□□□ 0.344e-6■■■■□ 22.8
RPS3P23396 DNAJB1-203ENST00000594099 995 ntTSL 416.75■□□□□ 0.272e-6■■■■□ 22.8
RPS3P23396 GRWD1-203ENST00000599949 518 ntTSL 416.38■□□□□ 0.214e-6■■■■□ 22.8
RPS3P23396 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC16.29■□□□□ 0.24e-6■■■■□ 22.8
RPS3P23396 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.08■□□□□ 0.174e-6■■■■□ 22.8
RPS3P23396 DNAJB1-207ENST00000596853 593 ntTSL 416.08■□□□□ 0.162e-6■■■■□ 22.8
RPS3P23396 VPS29-204ENST00000548259 563 ntTSL 215.96■□□□□ 0.154e-6■■■■□ 22.8
RPS3P23396 SHISA5-205ENST00000424965 884 ntTSL 515.96■□□□□ 0.154e-6■■■■□ 22.8
RPS3P23396 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC15.91■□□□□ 0.143e-11■■■■□ 22.8
RPS3P23396 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC15.86■□□□□ 0.134e-6■■■■□ 22.8
RPS3P23396 GRWD1-202ENST00000598711 881 ntTSL 315.85■□□□□ 0.132e-6■■■■□ 22.8
RPS3P23396 VPS29-207ENST00000549970 818 ntTSL 3 BASIC15.74■□□□□ 0.114e-6■■■■□ 22.8
RPS3P23396 MARCH6-211ENST00000512449 832 ntTSL 515.57■□□□□ 0.084e-6■■■■□ 22.8
RPS3P23396 XPO5-202ENST00000398799 568 ntTSL 415.56■□□□□ 0.084e-6■■■■□ 22.8
RPS3P23396 LAP3-208ENST00000512397 689 ntTSL 215.48■□□□□ 0.074e-6■■■■□ 22.8
RPS3P23396 SHISA5-216ENST00000494854 1908 ntTSL 1 (best)15.39■□□□□ 0.054e-6■■■■□ 22.8
RPS3P23396 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.053e-11■■■■□ 22.8
RPS3P23396 MRPL17-202ENST00000529958 1002 ntTSL 215.01□□□□□ -0.014e-6■■■■□ 22.8
RPS3P23396 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.033e-11■■■■□ 22.8
RPS3P23396 PA2G4-207ENST00000553057 687 ntTSL 214.86□□□□□ -0.036e-9■■■■□ 22.8
RPS3P23396 DNAJB1-206ENST00000596075 573 ntTSL 414.72□□□□□ -0.052e-6■■■■□ 22.8
RPS3P23396 VPS33B-205ENST00000556096 1731 ntTSL 214.62□□□□□ -0.074e-6■■■■□ 22.8
RPS3P23396 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.082e-6■■■■□ 22.8
RPS3P23396 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.084e-6■■■■□ 22.8
RPS3P23396 SHISA5-218ENST00000497863 972 ntTSL 214.51□□□□□ -0.094e-6■■■■□ 22.8
RPS3P23396 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC13.94□□□□□ -0.184e-6■■■■□ 22.8
RPS3P23396 VPS33B-208ENST00000574755 2356 ntTSL 213.89□□□□□ -0.194e-6■■■■□ 22.8
RPS3P23396 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.24e-6■■■■□ 22.8
RPS3P23396 ALAS2-205ENST00000463868 646 ntTSL 313.67□□□□□ -0.222e-7■■■■□ 22.8
RPS3P23396 ALAS2-207ENST00000493869 658 ntTSL 213.67□□□□□ -0.222e-7■■■■□ 22.8
RPS3P23396 SHISA5-206ENST00000426002 1839 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.244e-6■■■■□ 22.8
RPS3P23396 PRMT1-214ENST00000529836 580 ntTSL 313.53□□□□□ -0.243e-11■■■■□ 22.8
RPS3P23396 VPS33B-206ENST00000557358 561 ntTSL 413.44□□□□□ -0.264e-6■■■■□ 22.8
RPS3P23396 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.272e-6■■■■□ 22.8
RPS3P23396 PEX19-211ENST00000533104 544 ntTSL 413.36□□□□□ -0.274e-6■■■■□ 22.8
RPS3P23396 VPS33B-202ENST00000535906 2420 ntTSL 2 BASIC13.2□□□□□ -0.34e-6■■■■□ 22.8
RPS3P23396 SERPINB1-201ENST00000380739 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.34e-6■■■■□ 22.8
RPS3P23396 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC13.07□□□□□ -0.324e-6■■■■□ 22.8
RPS3P23396 PEX19-208ENST00000532508 1237 ntTSL 512.99□□□□□ -0.334e-6■■■■□ 22.8
RPS3P23396 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.372e-6■■■■□ 22.8
RPS3P23396 MRPL17-203ENST00000532203 448 ntTSL 312.65□□□□□ -0.384e-6■■■■□ 22.8
RPS3P23396 SHISA5-211ENST00000460758 1297 ntTSL 1 (best)12.48□□□□□ -0.414e-6■■■■□ 22.8
RPS3P23396 DNAJB1-209ENST00000598692 567 ntTSL 212.48□□□□□ -0.412e-6■■■■□ 22.8
RPS3P23396 TCP1-207ENST00000536807 873 ntTSL 212.43□□□□□ -0.424e-6■■■■□ 22.8
RPS3P23396 MAD2L1BP-202ENST00000451025 1517 ntTSL 2 BASIC12.31□□□□□ -0.444e-6■■■■□ 22.8
RPS3P23396 AL139011.2-201ENST00000556710 2635 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.454e-6■■■■□ 22.8
RPS3P23396 VPS29-211ENST00000553128 449 ntTSL 312.03□□□□□ -0.484e-6■■■■□ 22.8
RPS3P23396 VPS33B-201ENST00000333371 2767 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.494e-6■■■■□ 22.8
RPS3P23396 PEX19-212ENST00000533699 556 ntTSL 411.66□□□□□ -0.544e-6■■■■□ 22.8
RPS3P23396 ALAS2-206ENST00000477869 582 ntTSL 511.65□□□□□ -0.542e-7■■■■□ 22.8
RPS3P23396 MRPS7-207ENST00000584678 692 ntTSL 511.52□□□□□ -0.574e-6■■■■□ 22.8
RPS3P23396 PRMT1-212ENST00000529284 1182 ntTSL 511.26□□□□□ -0.613e-11■■■■□ 22.8
RPS3P23396 PEX19-210ENST00000532643 894 ntTSL 210.99□□□□□ -0.654e-6■■■■□ 22.8
RPS3P23396 MAD2L1BP-201ENST00000372171 1301 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.674e-6■■■■□ 22.8
RPS3P23396 MARCH6-208ENST00000510792 1963 ntTSL 2 BASIC10.68□□□□□ -0.74e-6■■■■□ 22.8
RPS3P23396 MRPS7-206ENST00000583407 864 ntTSL 310.58□□□□□ -0.724e-6■■■■□ 22.8
RPS3P23396 CPNE3-212ENST00000621783 817 ntTSL 510.57□□□□□ -0.724e-6■■■■□ 22.8
RPS3P23396 MRPS7-205ENST00000581993 731 ntTSL 210.53□□□□□ -0.724e-6■■■■□ 22.8
RPS3P23396 RFESD-205ENST00000506212 720 ntTSL 210.22□□□□□ -0.774e-6■■■■□ 22.8
RPS3P23396 HEPH-204ENST00000425114 2459 ntTSL 59.95□□□□□ -0.824e-6■■■■□ 22.8
RPS3P23396 MAD2L1BP-203ENST00000508232 556 ntTSL 29.73□□□□□ -0.854e-6■■■■□ 22.8
RPS3P23396 MARCH6-205ENST00000505253 676 ntTSL 39.57□□□□□ -0.884e-6■■■■□ 22.8
RPS3P23396 HEPH-208ENST00000471121 802 ntTSL 29.54□□□□□ -0.884e-6■■■■□ 22.8
RPS3P23396 PRMT1-206ENST00000526224 578 ntTSL 39.4□□□□□ -0.93e-11■■■■□ 22.8
RPS3P23396 ATOX1-201ENST00000313115 488 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.924e-6■■■■□ 22.8
RPS3P23396 PEX19-205ENST00000472750 3504 ntTSL 1 (best)8.73□□□□□ -1.014e-6■■■■□ 22.8
RPS3P23396 ATOX1-205ENST00000522314 724 ntTSL 2 BASIC8.67□□□□□ -1.024e-6■■■■□ 22.8
RPS3P23396 ATOX1-202ENST00000520382 466 ntTSL 5 BASIC8.67□□□□□ -1.024e-6■■■■□ 22.8
RPS3P23396 DNAJB1-204ENST00000595139 569 ntTSL 48.6□□□□□ -1.034e-6■■■■□ 22.8
RPS3P23396 ATOX1-206ENST00000522710 591 ntAPPRIS P1 TSL 2 BASIC8.45□□□□□ -1.064e-6■■■■□ 22.8
RPS3P23396 VPS29-203ENST00000546588 1059 ntTSL 3 BASIC8.35□□□□□ -1.074e-6■■■■□ 22.8
RPS3P23396 PRMT1-208ENST00000527412 463 ntTSL 38.08□□□□□ -1.123e-11■■■■□ 22.8
RPS3P23396 DNAJB1-202ENST00000396969 1287 ntTSL 2 BASIC8.06□□□□□ -1.122e-6■■■■□ 22.8
RPS3P23396 LAP3-206ENST00000508497 651 ntTSL 37.77□□□□□ -1.174e-6■■■■□ 22.8
RPS3P23396 HEPH-201ENST00000336279 4228 ntTSL 1 (best) BASIC7.7□□□□□ -1.184e-6■■■■□ 22.8
RPS3P23396 TCP1-212ENST00000539948 706 ntTSL 37.53□□□□□ -1.24e-6■■■■□ 22.8
RPS3P23396 PEX19-201ENST00000368072 3661 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.214e-6■■■■□ 22.8
RPS3P23396 USP9X-201ENST00000324545 12401 ntTSL 5 BASIC7.3□□□□□ -1.242e-6■■■■□ 22.8
RPS3P23396 HEPH-202ENST00000343002 4854 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.244e-6■■■■□ 22.8
RPS3P23396 ATOX1-203ENST00000521264 4341 ntTSL 2 BASIC7.26□□□□□ -1.254e-6■■■■□ 22.8
RPS3P23396 HEPH-209ENST00000519389 6013 ntAPPRIS P3 TSL 1 (best) BASIC7.23□□□□□ -1.254e-6■■■■□ 22.8
RPS3P23396 HEPH-203ENST00000419594 3694 ntTSL 1 (best) BASIC6.51□□□□□ -1.374e-6■■■■□ 22.8
RPS3P23396 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.374e-6■■■■□ 22.8
RPS3P23396 ALAS2-204ENST00000455688 664 ntTSL 26.28□□□□□ -1.42e-7■■■■□ 22.8
RPS3P23396 MRPL17-204ENST00000532676 303 ntTSL 36.23□□□□□ -1.414e-6■■■■□ 22.8
RPS3P23396 PEX19-207ENST00000524939 548 ntTSL 25.9□□□□□ -1.464e-6■■■■□ 22.8
RPS3P23396 SERPINB1-203ENST00000468511 449 ntTSL 35.79□□□□□ -1.484e-6■■■■□ 22.8
RPS3P23396 DNAJB1-205ENST00000595992 601 ntTSL 25.36□□□□□ -1.552e-6■■■■□ 22.8
RPS3P23396 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC4.84□□□□□ -1.634e-6■■■■□ 22.8
RPS3P23396 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC4.66□□□□□ -1.664e-6■■■■□ 22.8
RPS3P23396 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC4.41□□□□□ -1.74e-6■■■■□ 22.8
RPS3P23396 PLRG1-211ENST00000512719 749 ntTSL 24.24□□□□□ -1.734e-6■■■■□ 22.8
RPS3P23396 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.39□□□□□ -1.874e-6■■■■□ 22.8
RPS3P23396 TCP1-205ENST00000536394 535 ntTSL 43.12□□□□□ -1.914e-6■■■■□ 22.8
RPS3P23396 TCP1-216ENST00000545764 709 ntTSL 22.45□□□□□ -2.024e-6■■■■□ 22.8
RPS3P23396 CPNE3-204ENST00000517862 654 ntTSL 32□□□□□ -2.094e-6■■■■□ 22.8
RPS3P23396 VPS29-205ENST00000548539 598 ntTSL 30.87□□□□□ -2.274e-6■■■■□ 22.8
Retrieved 100 of 24,271 protein–RNA pairs in 323.6 ms