RNA–Protein interactions for RNA: ENST00000534252.2

AP002444.1-201, humanhuman

TSL 3 BASIC

Gene AP002444.1, Length 620 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP002444.1-201ENST00000534252 AEBP2Q6ZN18 517 aaPredicted RBP19.8■□□□□ 0.76
AP002444.1-201ENST00000534252 CHIC1Q5VXU3 224 aa18.79■□□□□ 0.6
AP002444.1-201ENST00000534252 SENP3Q9H4L4 574 aaPredicted RBP16.97■□□□□ 0.31
AP002444.1-201ENST00000534252 PHF23Q9BUL5 403 aaPredicted RBP16.7■□□□□ 0.26
AP002444.1-201ENST00000534252 FOXD1Q16676 465 aa15.77■□□□□ 0.12
AP002444.1-201ENST00000534252 PLPPR3Q6T4P5 718 aa15.03■□□□□ -0
AP002444.1-201ENST00000534252 MSH5O43196 834 aa14.83□□□□□ -0.04
AP002444.1-201ENST00000534252 PIAS4Q8N2W9 510 aaPredicted RBP14.78□□□□□ -0.04
AP002444.1-201ENST00000534252 PPP6R1Q9UPN7 881 aa14.68□□□□□ -0.06
AP002444.1-201ENST00000534252 ADRA2BP18089 450 aa14.66□□□□□ -0.06
AP002444.1-201ENST00000534252 POTEDQ86YR6 584 aa14.51□□□□□ -0.09
AP002444.1-201ENST00000534252 SCAF1Q9H7N4 1312 aaKnown RBP13.48□□□□□ -0.25
AP002444.1-201ENST00000534252 MAPK8IP2Q13387 824 aaPredicted RBP13.46□□□□□ -0.25
AP002444.1-201ENST00000534252 DMRT2Q9Y5R5 561 aa13.42□□□□□ -0.26
AP002444.1-201ENST00000534252 PPP4R3CPQ6ZMV5 832 aa13.15□□□□□ -0.3
AP002444.1-201ENST00000534252 DCAF8L1A6NGE4 600 aa12.94□□□□□ -0.34
AP002444.1-201ENST00000534252 CNKSR2Q8WXI2 1034 aa12.92□□□□□ -0.34
AP002444.1-201ENST00000534252 HOXD11P31277 338 aaPredicted RBP12.89□□□□□ -0.35
AP002444.1-201ENST00000534252 RNF216Q9NWF9 866 aaPredicted RBP12.81□□□□□ -0.36
AP002444.1-201ENST00000534252 CACNB1Q02641 598 aaPredicted RBP12.76□□□□□ -0.37
AP002444.1-201ENST00000534252 NCBP3Q53F19 620 aaKnown RBP12.67□□□□□ -0.38
AP002444.1-201ENST00000534252 RNF39Q9H2S5 420 aa12.61□□□□□ -0.39
AP002444.1-201ENST00000534252 DNAJC5BQ9UF47 199 aa12.46□□□□□ -0.41
AP002444.1-201ENST00000534252 C1QBPQ07021 282 aaKnown RBP12.45□□□□□ -0.42
AP002444.1-201ENST00000534252 NPM3O75607 178 aaKnown RBP12.44□□□□□ -0.42
AP002444.1-201ENST00000534252 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.35□□□□□ -0.43
AP002444.1-201ENST00000534252 KCNA4P22459 653 aa12.16□□□□□ -0.46
AP002444.1-201ENST00000534252 U3KPZ7 1027 aaPredicted RBP12.03□□□□□ -0.48
AP002444.1-201ENST00000534252 CAPN15O75808 1086 aa11.91□□□□□ -0.5
AP002444.1-201ENST00000534252 SPINK5Q9NQ38 1064 aaPredicted RBP11.87□□□□□ -0.51
AP002444.1-201ENST00000534252 SLC4A2P04920 1241 aa11.86□□□□□ -0.51
AP002444.1-201ENST00000534252 DSG3P32926 999 aa11.79□□□□□ -0.52
AP002444.1-201ENST00000534252 APLP2Q06481 763 aa11.78□□□□□ -0.52
AP002444.1-201ENST00000534252 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.74□□□□□ -0.53
AP002444.1-201ENST00000534252 HNRNPUL2Q1KMD3 747 aaKnown RBP11.74□□□□□ -0.53
AP002444.1-201ENST00000534252 TRHP20396 242 aaPredicted RBP11.7□□□□□ -0.54
AP002444.1-201ENST00000534252 ZNF219Q9P2Y4 722 aaPredicted RBP11.68□□□□□ -0.54
AP002444.1-201ENST00000534252 SAMD1Q6SPF0 538 aaPredicted RBP11.66□□□□□ -0.54
AP002444.1-201ENST00000534252 ABCB7O75027 752 aa11.61□□□□□ -0.55
AP002444.1-201ENST00000534252 MYCNP04198 464 aaPredicted RBP11.54□□□□□ -0.56
AP002444.1-201ENST00000534252 SLC4A1APQ9BWU0 796 aaKnown RBP11.5□□□□□ -0.57
AP002444.1-201ENST00000534252 FOXD4L1Q9NU39 408 aa11.39□□□□□ -0.59
AP002444.1-201ENST00000534252 POTEHQ6S545 545 aa11.38□□□□□ -0.59
AP002444.1-201ENST00000534252 POLA2Q14181 598 aa11.35□□□□□ -0.59
AP002444.1-201ENST00000534252 RBM42Q9BTD8 480 aaKnown RBP11.32□□□□□ -0.6
AP002444.1-201ENST00000534252 NISCHQ9Y2I1 1504 aa11.31□□□□□ -0.6
AP002444.1-201ENST00000534252 ATF5Q9Y2D1 282 aaPredicted RBP11.22□□□□□ -0.61
AP002444.1-201ENST00000534252 ZBTB12Q9Y330 459 aaPredicted RBP11.17□□□□□ -0.62
AP002444.1-201ENST00000534252 ZBTB22O15209 634 aa11.15□□□□□ -0.62
AP002444.1-201ENST00000534252 CHRDL2Q6WN34 429 aa11.05□□□□□ -0.64
AP002444.1-201ENST00000534252 ATXN8OSP0DMR3 200 aa11.03□□□□□ -0.64
AP002444.1-201ENST00000534252 AKT1S1Q96B36 256 aa11.02□□□□□ -0.65
AP002444.1-201ENST00000534252 OSCARQ8IYS5 282 aa11.01□□□□□ -0.65
AP002444.1-201ENST00000534252 REM2Q8IYK8 340 aaPredicted RBP10.9□□□□□ -0.66
AP002444.1-201ENST00000534252 FBLN2P98095 1184 aa10.87□□□□□ -0.67
AP002444.1-201ENST00000534252 SPDYE2BA6NHP3 402 aa10.79□□□□□ -0.68
AP002444.1-201ENST00000534252 PITPNM1O00562 1244 aa10.79□□□□□ -0.68
AP002444.1-201ENST00000534252 SPDYE6P0CI01 402 aa10.79□□□□□ -0.68
AP002444.1-201ENST00000534252 SPDYE2Q495Y8 402 aa10.79□□□□□ -0.68
AP002444.1-201ENST00000534252 PIP4P2Q8N4L2 257 aa10.77□□□□□ -0.69
AP002444.1-201ENST00000534252 MKRN4PQ13434 485 aaPredicted RBP10.71□□□□□ -0.69
AP002444.1-201ENST00000534252 FXR2P51116 673 aaKnown RBP eCLIP10.69□□□□□ -0.7
AP002444.1-201ENST00000534252 SP7Q8TDD2 431 aaPredicted RBP10.66□□□□□ -0.7
AP002444.1-201ENST00000534252 ZNF692Q9BU19 519 aaPredicted RBP10.65□□□□□ -0.7
AP002444.1-201ENST00000534252 HAX1O00165 279 aa10.62□□□□□ -0.71
AP002444.1-201ENST00000534252 SPDYE1Q8NFV5 336 aaPredicted RBP10.62□□□□□ -0.71
AP002444.1-201ENST00000534252 CLEC11AQ9Y240 323 aa10.61□□□□□ -0.71
AP002444.1-201ENST00000534252 SSUH2Q9Y2M2 353 aa10.61□□□□□ -0.71
AP002444.1-201ENST00000534252 CSRNP3Q8WYN3 585 aa10.6□□□□□ -0.71
AP002444.1-201ENST00000534252 PRKAR2AP13861 404 aaKnown RBP10.53□□□□□ -0.72
AP002444.1-201ENST00000534252 EHMT2Q96KQ7 1210 aa10.52□□□□□ -0.73
AP002444.1-201ENST00000534252 PABPN1Q86U42 306 aaKnown RBP eCLIP10.49□□□□□ -0.73
AP002444.1-201ENST00000534252 PRR29P0C7W0 189 aa10.42□□□□□ -0.74
AP002444.1-201ENST00000534252 EVX2Q03828 476 aa10.4□□□□□ -0.74
AP002444.1-201ENST00000534252 CHADLQ6NUI6 762 aa10.38□□□□□ -0.75
AP002444.1-201ENST00000534252 C19orf67A6NJJ6 358 aa10.35□□□□□ -0.75
AP002444.1-201ENST00000534252 SPDYE4A6NLX3 237 aa10.22□□□□□ -0.77
AP002444.1-201ENST00000534252 STAG3Q9UJ98 1225 aa10.22□□□□□ -0.77
AP002444.1-201ENST00000534252 FARP1Q9Y4F1 1045 aaPredicted RBP10.22□□□□□ -0.77
AP002444.1-201ENST00000534252 GABBR2O75899 941 aa10.21□□□□□ -0.77
AP002444.1-201ENST00000534252 CD44P16070 742 aaKnown RBP10.2□□□□□ -0.78
AP002444.1-201ENST00000534252 ABCC9O60706 1549 aa10.17□□□□□ -0.78
AP002444.1-201ENST00000534252 CREBZFQ9NS37 354 aa10.11□□□□□ -0.79
AP002444.1-201ENST00000534252 CCDC180Q9P1Z9 1646 aa10.09□□□□□ -0.79
AP002444.1-201ENST00000534252 CLCN6P51797 869 aa10.06□□□□□ -0.8
AP002444.1-201ENST00000534252 ZRANB1Q9UGI0 708 aa10.05□□□□□ -0.8
AP002444.1-201ENST00000534252 ZNF579Q8NAF0 562 aaKnown RBP10.02□□□□□ -0.81
AP002444.1-201ENST00000534252 PAK3O75914 559 aaPredicted RBP10□□□□□ -0.81
AP002444.1-201ENST00000534252 NPM1P06748 294 aaKnown RBP eCLIP9.99□□□□□ -0.81
AP002444.1-201ENST00000534252 LHX8Q68G74 356 aa9.99□□□□□ -0.81
AP002444.1-201ENST00000534252 DCBLD2Q96PD2 775 aa9.98□□□□□ -0.81
AP002444.1-201ENST00000534252 POTEIP0CG38 1075 aa9.96□□□□□ -0.82
AP002444.1-201ENST00000534252 PROM2Q8N271 834 aa9.93□□□□□ -0.82
AP002444.1-201ENST00000534252 MNX1P50219 401 aaPredicted RBP9.91□□□□□ -0.82
AP002444.1-201ENST00000534252 GALR2O43603 387 aaPredicted RBP9.89□□□□□ -0.83
AP002444.1-201ENST00000534252 PHF12Q96QT6 1004 aa9.88□□□□□ -0.83
AP002444.1-201ENST00000534252 PLEKHG5O94827 1062 aa9.83□□□□□ -0.84
AP002444.1-201ENST00000534252 TSPYL2Q9H2G4 693 aaPredicted RBP9.78□□□□□ -0.84
AP002444.1-201ENST00000534252 MIER1Q8N108 512 aa9.77□□□□□ -0.85
AP002444.1-201ENST00000534252 MS4A3Q96HJ5 214 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms