Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ATF4P18848 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC16.48■□□□□ 0.23
ATF4P18848 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC16.48■□□□□ 0.23
ATF4P18848 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC16.48■□□□□ 0.23
ATF4P18848 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC16.48■□□□□ 0.23
ATF4P18848 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC16.48■□□□□ 0.23
ATF4P18848 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ATF4P18848 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ATF4P18848 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ATF4P18848 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC16.48■□□□□ 0.23
ATF4P18848 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC16.48■□□□□ 0.23
ATF4P18848 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
ATF4P18848 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ATF4P18848 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
ATF4P18848 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
ATF4P18848 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
ATF4P18848 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
ATF4P18848 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ATF4P18848 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ATF4P18848 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ATF4P18848 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
ATF4P18848 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.48■□□□□ 0.23
ATF4P18848 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
ATF4P18848 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ATF4P18848 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
ATF4P18848 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ATF4P18848 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ATF4P18848 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
ATF4P18848 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ATF4P18848 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ATF4P18848 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ATF4P18848 AC006455.2-201ENST00000429931 906 ntBASIC16.47■□□□□ 0.23
ATF4P18848 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ATF4P18848 AC079089.2-201ENST00000531211 1277 ntBASIC16.47■□□□□ 0.23
ATF4P18848 AC099791.2-201ENST00000605725 427 ntBASIC16.47■□□□□ 0.23
ATF4P18848 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC16.47■□□□□ 0.23
ATF4P18848 SF1-220ENST00000626028 704 ntTSL 2 BASIC16.47■□□□□ 0.23
ATF4P18848 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ATF4P18848 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC16.47■□□□□ 0.23
ATF4P18848 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ATF4P18848 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC16.47■□□□□ 0.23
ATF4P18848 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC16.47■□□□□ 0.23
ATF4P18848 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC16.47■□□□□ 0.23
ATF4P18848 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ATF4P18848 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ATF4P18848 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ATF4P18848 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
ATF4P18848 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
ATF4P18848 PKD1P5-201ENST00000532415 10291 ntBASIC16.47■□□□□ 0.23
ATF4P18848 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC16.46■□□□□ 0.23
ATF4P18848 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
ATF4P18848 OR7E47P-201ENST00000546390 1422 ntBASIC16.46■□□□□ 0.23
ATF4P18848 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
ATF4P18848 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC16.46■□□□□ 0.23
ATF4P18848 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
ATF4P18848 GATM-206ENST00000558336 1522 ntTSL 2 BASIC16.46■□□□□ 0.23
ATF4P18848 GTSE1-AS1-202ENST00000623117 1518 ntBASIC16.46■□□□□ 0.23
ATF4P18848 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ATF4P18848 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
ATF4P18848 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ATF4P18848 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC16.46■□□□□ 0.23
ATF4P18848 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
ATF4P18848 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC16.46■□□□□ 0.23
ATF4P18848 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC16.46■□□□□ 0.23
ATF4P18848 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC16.46■□□□□ 0.23
ATF4P18848 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC16.46■□□□□ 0.23
ATF4P18848 AC068587.7-201ENST00000641602 218 ntBASIC16.46■□□□□ 0.23
ATF4P18848 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC16.46■□□□□ 0.23
ATF4P18848 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ATF4P18848 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
ATF4P18848 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ATF4P18848 AC005332.7-201ENST00000614046 2005 ntBASIC16.46■□□□□ 0.23
ATF4P18848 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ATF4P18848 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ATF4P18848 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ATF4P18848 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.22
ATF4P18848 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
ATF4P18848 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC16.46■□□□□ 0.22
ATF4P18848 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC16.46■□□□□ 0.22
ATF4P18848 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC16.45■□□□□ 0.22
ATF4P18848 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ATF4P18848 USP45-205ENST00000472914 1617 ntTSL 5 BASIC16.45■□□□□ 0.22
ATF4P18848 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ATF4P18848 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
ATF4P18848 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
ATF4P18848 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ATF4P18848 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
ATF4P18848 EDA-201ENST00000338901 1233 ntBASIC16.45■□□□□ 0.22
ATF4P18848 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ATF4P18848 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
ATF4P18848 RBM38-205ENST00000440234 686 ntTSL 2 BASIC16.45■□□□□ 0.22
ATF4P18848 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ATF4P18848 AL031602.1-201ENST00000633169 911 ntBASIC16.45■□□□□ 0.22
ATF4P18848 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
ATF4P18848 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
ATF4P18848 AC125437.2-201ENST00000625180 2167 ntBASIC16.45■□□□□ 0.22
ATF4P18848 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
ATF4P18848 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC16.45■□□□□ 0.22
ATF4P18848 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
ATF4P18848 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms