Protein–RNA interactions for Protein: P14651

HOXB3, Homeobox protein Hox-B3, humanhuman

Predicted RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3P14651 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
HOXB3P14651 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.36■□□□□ 0.69
HOXB3P14651 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HOXB3P14651 LINC01006-201ENST00000333319 2292 ntBASIC19.36■□□□□ 0.69
HOXB3P14651 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HOXB3P14651 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HOXB3P14651 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC19.36■□□□□ 0.69
HOXB3P14651 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HOXB3P14651 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HOXB3P14651 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
HOXB3P14651 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HOXB3P14651 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HOXB3P14651 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HOXB3P14651 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC19.36■□□□□ 0.69
HOXB3P14651 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC19.36■□□□□ 0.69
HOXB3P14651 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC19.36■□□□□ 0.69
HOXB3P14651 AC023632.3-201ENST00000521633 145 ntBASIC19.36■□□□□ 0.69
HOXB3P14651 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC19.36■□□□□ 0.69
HOXB3P14651 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC19.36■□□□□ 0.69
HOXB3P14651 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HOXB3P14651 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC19.36■□□□□ 0.69
HOXB3P14651 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC19.36■□□□□ 0.69
HOXB3P14651 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
HOXB3P14651 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HOXB3P14651 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.36■□□□□ 0.69
HOXB3P14651 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.36■□□□□ 0.69
HOXB3P14651 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.36■□□□□ 0.69
HOXB3P14651 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HOXB3P14651 AC092720.2-201ENST00000602388 1665 ntBASIC19.36■□□□□ 0.69
HOXB3P14651 SMG8-203ENST00000578922 2178 ntBASIC19.36■□□□□ 0.69
HOXB3P14651 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HOXB3P14651 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.36■□□□□ 0.69
HOXB3P14651 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HOXB3P14651 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC19.36■□□□□ 0.69
HOXB3P14651 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC19.35■□□□□ 0.69
HOXB3P14651 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HOXB3P14651 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HOXB3P14651 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HOXB3P14651 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HOXB3P14651 H19-201ENST00000411754 1788 ntTSL 5 BASIC19.35■□□□□ 0.69
HOXB3P14651 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
HOXB3P14651 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
HOXB3P14651 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
HOXB3P14651 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HOXB3P14651 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
HOXB3P14651 AP000593.1-201ENST00000393668 712 ntBASIC19.35■□□□□ 0.69
HOXB3P14651 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HOXB3P14651 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC19.35■□□□□ 0.69
HOXB3P14651 KRT18P48-201ENST00000434763 852 ntBASIC19.35■□□□□ 0.69
HOXB3P14651 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC19.35■□□□□ 0.69
HOXB3P14651 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
HOXB3P14651 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HOXB3P14651 AC145285.6-201ENST00000604632 637 ntBASIC19.35■□□□□ 0.69
HOXB3P14651 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC19.35■□□□□ 0.69
HOXB3P14651 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HOXB3P14651 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
HOXB3P14651 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HOXB3P14651 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HOXB3P14651 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HOXB3P14651 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HOXB3P14651 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
HOXB3P14651 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC19.34■□□□□ 0.69
HOXB3P14651 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.34■□□□□ 0.69
HOXB3P14651 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.34■□□□□ 0.69
HOXB3P14651 DPP3P2-201ENST00000416030 1696 ntBASIC19.34■□□□□ 0.69
HOXB3P14651 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HOXB3P14651 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HOXB3P14651 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC19.34■□□□□ 0.69
HOXB3P14651 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
HOXB3P14651 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.34■□□□□ 0.69
HOXB3P14651 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
HOXB3P14651 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HOXB3P14651 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HOXB3P14651 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.34■□□□□ 0.69
HOXB3P14651 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HOXB3P14651 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HOXB3P14651 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
HOXB3P14651 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HOXB3P14651 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
HOXB3P14651 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.34■□□□□ 0.69
HOXB3P14651 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
HOXB3P14651 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
HOXB3P14651 AC020907.5-201ENST00000624372 1936 ntBASIC19.33■□□□□ 0.69
HOXB3P14651 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
HOXB3P14651 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
HOXB3P14651 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC19.33■□□□□ 0.69
HOXB3P14651 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
HOXB3P14651 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC19.33■□□□□ 0.69
HOXB3P14651 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
HOXB3P14651 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
HOXB3P14651 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HOXB3P14651 DUSP5P1-201ENST00000441325 1139 ntBASIC19.33■□□□□ 0.68
HOXB3P14651 AC104076.2-201ENST00000448912 469 ntBASIC19.33■□□□□ 0.68
HOXB3P14651 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC19.33■□□□□ 0.68
HOXB3P14651 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC19.33■□□□□ 0.68
HOXB3P14651 WWOX-216ENST00000569818 525 ntBASIC19.33■□□□□ 0.68
HOXB3P14651 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC19.33■□□□□ 0.68
HOXB3P14651 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC19.33■□□□□ 0.68
HOXB3P14651 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
HOXB3P14651 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms