Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC23.15■■□□□ 1.3
CTNND1O60716 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CTNND1O60716 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
CTNND1O60716 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC23.15■■□□□ 1.3
CTNND1O60716 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CTNND1O60716 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CTNND1O60716 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
CTNND1O60716 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
CTNND1O60716 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC23.15■■□□□ 1.3
CTNND1O60716 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
CTNND1O60716 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC23.15■■□□□ 1.3
CTNND1O60716 TPM1-226ENST00000560959 925 ntTSL 2 BASIC23.15■■□□□ 1.3
CTNND1O60716 RMI2-205ENST00000576027 818 ntTSL 2 BASIC23.15■■□□□ 1.3
CTNND1O60716 CLN6-221ENST00000637494 765 ntTSL 5 BASIC23.15■■□□□ 1.3
CTNND1O60716 GOLGA6L3-201ENST00000507199 1679 ntBASIC23.15■■□□□ 1.3
CTNND1O60716 AC092720.2-201ENST00000602388 1665 ntBASIC23.15■■□□□ 1.3
CTNND1O60716 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
CTNND1O60716 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC23.15■■□□□ 1.3
CTNND1O60716 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
CTNND1O60716 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC23.14■■□□□ 1.3
CTNND1O60716 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC23.14■■□□□ 1.3
CTNND1O60716 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
CTNND1O60716 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
CTNND1O60716 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC23.14■■□□□ 1.3
CTNND1O60716 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC23.14■■□□□ 1.3
CTNND1O60716 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC23.14■■□□□ 1.3
CTNND1O60716 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
CTNND1O60716 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CTNND1O60716 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.29
CTNND1O60716 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC23.14■■□□□ 1.29
CTNND1O60716 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC23.14■■□□□ 1.29
CTNND1O60716 RBM42-202ENST00000586618 771 ntTSL 3 BASIC23.14■■□□□ 1.29
CTNND1O60716 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC23.14■■□□□ 1.29
CTNND1O60716 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC23.14■■□□□ 1.29
CTNND1O60716 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.29
CTNND1O60716 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
CTNND1O60716 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC23.13■■□□□ 1.29
CTNND1O60716 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
CTNND1O60716 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
CTNND1O60716 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CTNND1O60716 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CTNND1O60716 TSPY14P-201ENST00000303979 915 ntBASIC23.13■■□□□ 1.29
CTNND1O60716 PRR31-201ENST00000371629 978 ntTSL 2 BASIC23.13■■□□□ 1.29
CTNND1O60716 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CTNND1O60716 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC23.13■■□□□ 1.29
CTNND1O60716 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC23.13■■□□□ 1.29
CTNND1O60716 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CTNND1O60716 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC23.13■■□□□ 1.29
CTNND1O60716 EGLN1P1-201ENST00000531623 762 ntBASIC23.13■■□□□ 1.29
CTNND1O60716 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
CTNND1O60716 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
CTNND1O60716 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC23.13■■□□□ 1.29
CTNND1O60716 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC23.13■■□□□ 1.29
CTNND1O60716 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC23.13■■□□□ 1.29
CTNND1O60716 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
CTNND1O60716 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CTNND1O60716 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC23.13■■□□□ 1.29
CTNND1O60716 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC23.13■■□□□ 1.29
CTNND1O60716 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CTNND1O60716 PHGDH-210ENST00000641115 1638 ntBASIC23.12■■□□□ 1.29
CTNND1O60716 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CTNND1O60716 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CTNND1O60716 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
CTNND1O60716 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
CTNND1O60716 AC097488.1-201ENST00000507834 756 ntBASIC23.12■■□□□ 1.29
CTNND1O60716 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC23.12■■□□□ 1.29
CTNND1O60716 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
CTNND1O60716 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
CTNND1O60716 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
CTNND1O60716 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
CTNND1O60716 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC23.12■■□□□ 1.29
CTNND1O60716 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
CTNND1O60716 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
CTNND1O60716 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CTNND1O60716 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC23.11■■□□□ 1.29
CTNND1O60716 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
CTNND1O60716 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
CTNND1O60716 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
CTNND1O60716 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
CTNND1O60716 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC23.11■■□□□ 1.29
CTNND1O60716 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
CTNND1O60716 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
CTNND1O60716 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC23.11■■□□□ 1.29
CTNND1O60716 AC104076.2-201ENST00000448912 469 ntBASIC23.11■■□□□ 1.29
CTNND1O60716 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
CTNND1O60716 AC130371.2-201ENST00000619443 611 ntBASIC23.11■■□□□ 1.29
CTNND1O60716 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC23.11■■□□□ 1.29
CTNND1O60716 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CTNND1O60716 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
CTNND1O60716 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CTNND1O60716 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC23.1■■□□□ 1.29
CTNND1O60716 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CTNND1O60716 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC23.1■■□□□ 1.29
CTNND1O60716 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC23.1■■□□□ 1.29
CTNND1O60716 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
CTNND1O60716 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC23.1■■□□□ 1.29
CTNND1O60716 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC23.1■■□□□ 1.29
CTNND1O60716 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
CTNND1O60716 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC23.1■■□□□ 1.29
CTNND1O60716 DUX4L26-201ENST00000489078 1255 ntBASIC23.1■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms