Protein–RNA interactions for Protein: O60662

KLHL41, Kelch-like protein 41, humanhuman

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL41O60662 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
KLHL41O60662 MKRN4P-201ENST00000444706 1521 ntBASIC19.56■□□□□ 0.72
KLHL41O60662 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
KLHL41O60662 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
KLHL41O60662 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC19.55■□□□□ 0.72
KLHL41O60662 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
KLHL41O60662 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC19.55■□□□□ 0.72
KLHL41O60662 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
KLHL41O60662 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
KLHL41O60662 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
KLHL41O60662 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC19.55■□□□□ 0.72
KLHL41O60662 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC19.55■□□□□ 0.72
KLHL41O60662 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
KLHL41O60662 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC19.55■□□□□ 0.72
KLHL41O60662 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC19.55■□□□□ 0.72
KLHL41O60662 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
KLHL41O60662 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
KLHL41O60662 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC19.55■□□□□ 0.72
KLHL41O60662 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC19.55■□□□□ 0.72
KLHL41O60662 AC068338.2-201ENST00000563278 1430 ntBASIC19.55■□□□□ 0.72
KLHL41O60662 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
KLHL41O60662 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC19.55■□□□□ 0.72
KLHL41O60662 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
KLHL41O60662 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
KLHL41O60662 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC19.55■□□□□ 0.72
KLHL41O60662 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC19.55■□□□□ 0.72
KLHL41O60662 BX119927.1-201ENST00000636596 1552 ntBASIC19.55■□□□□ 0.72
KLHL41O60662 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
KLHL41O60662 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
KLHL41O60662 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
KLHL41O60662 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.55■□□□□ 0.72
KLHL41O60662 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
KLHL41O60662 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
KLHL41O60662 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
KLHL41O60662 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
KLHL41O60662 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
KLHL41O60662 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.54■□□□□ 0.72
KLHL41O60662 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
KLHL41O60662 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
KLHL41O60662 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
KLHL41O60662 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
KLHL41O60662 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
KLHL41O60662 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
KLHL41O60662 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC19.54■□□□□ 0.72
KLHL41O60662 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.54■□□□□ 0.72
KLHL41O60662 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC19.54■□□□□ 0.72
KLHL41O60662 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC19.54■□□□□ 0.72
KLHL41O60662 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC19.54■□□□□ 0.72
KLHL41O60662 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC19.54■□□□□ 0.72
KLHL41O60662 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
KLHL41O60662 TREX1-205ENST00000625293 1783 ntBASIC19.54■□□□□ 0.72
KLHL41O60662 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
KLHL41O60662 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.54■□□□□ 0.72
KLHL41O60662 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
KLHL41O60662 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.54■□□□□ 0.72
KLHL41O60662 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
KLHL41O60662 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
KLHL41O60662 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
KLHL41O60662 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.53■□□□□ 0.72
KLHL41O60662 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC19.53■□□□□ 0.72
KLHL41O60662 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
KLHL41O60662 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
KLHL41O60662 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
KLHL41O60662 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
KLHL41O60662 KRT8P36-201ENST00000489121 1440 ntBASIC19.53■□□□□ 0.72
KLHL41O60662 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
KLHL41O60662 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
KLHL41O60662 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC19.53■□□□□ 0.72
KLHL41O60662 CYP2T1P-201ENST00000432607 1285 ntBASIC19.53■□□□□ 0.72
KLHL41O60662 KLF13-207ENST00000560473 489 ntTSL 3 BASIC19.53■□□□□ 0.72
KLHL41O60662 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC19.53■□□□□ 0.72
KLHL41O60662 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
KLHL41O60662 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
KLHL41O60662 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.53■□□□□ 0.72
KLHL41O60662 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
KLHL41O60662 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
KLHL41O60662 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
KLHL41O60662 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.53■□□□□ 0.72
KLHL41O60662 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
KLHL41O60662 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
KLHL41O60662 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
KLHL41O60662 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
KLHL41O60662 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
KLHL41O60662 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
KLHL41O60662 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
KLHL41O60662 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
KLHL41O60662 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
KLHL41O60662 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.52■□□□□ 0.72
KLHL41O60662 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.52■□□□□ 0.72
KLHL41O60662 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
KLHL41O60662 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
KLHL41O60662 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
KLHL41O60662 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
KLHL41O60662 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
KLHL41O60662 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
KLHL41O60662 TSPY20P-201ENST00000450910 630 ntBASIC19.52■□□□□ 0.72
KLHL41O60662 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.52■□□□□ 0.72
KLHL41O60662 PBX1-209ENST00000485769 834 ntTSL 2 BASIC19.52■□□□□ 0.72
KLHL41O60662 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.52■□□□□ 0.72
KLHL41O60662 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms