Protein–RNA interactions for Protein: O15269

SPTLC1, Serine palmitoyltransferase 1, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1O15269 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC21.19■□□□□ 0.98
SPTLC1O15269 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SPTLC1O15269 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SPTLC1O15269 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
SPTLC1O15269 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC21.18■□□□□ 0.98
SPTLC1O15269 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SPTLC1O15269 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
SPTLC1O15269 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
SPTLC1O15269 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC21.18■□□□□ 0.98
SPTLC1O15269 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SPTLC1O15269 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SPTLC1O15269 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SPTLC1O15269 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SPTLC1O15269 AC012618.2-201ENST00000428058 849 ntBASIC21.18■□□□□ 0.98
SPTLC1O15269 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SPTLC1O15269 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SPTLC1O15269 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC21.18■□□□□ 0.98
SPTLC1O15269 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SPTLC1O15269 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
SPTLC1O15269 RARRES2P10-201ENST00000564312 460 ntBASIC21.18■□□□□ 0.98
SPTLC1O15269 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC21.18■□□□□ 0.98
SPTLC1O15269 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SPTLC1O15269 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
SPTLC1O15269 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC21.18■□□□□ 0.98
SPTLC1O15269 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
SPTLC1O15269 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC21.18■□□□□ 0.98
SPTLC1O15269 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SPTLC1O15269 CD37-204ENST00000535669 1674 ntTSL 2 BASIC21.18■□□□□ 0.98
SPTLC1O15269 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
SPTLC1O15269 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
SPTLC1O15269 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC21.18■□□□□ 0.98
SPTLC1O15269 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
SPTLC1O15269 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC21.17■□□□□ 0.98
SPTLC1O15269 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
SPTLC1O15269 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC21.17■□□□□ 0.98
SPTLC1O15269 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
SPTLC1O15269 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SPTLC1O15269 SNORA78-201ENST00000459373 127 ntBASIC21.17■□□□□ 0.98
SPTLC1O15269 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SPTLC1O15269 RPS20-210ENST00000523936 899 ntTSL 2 BASIC21.17■□□□□ 0.98
SPTLC1O15269 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC21.17■□□□□ 0.98
SPTLC1O15269 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC21.17■□□□□ 0.98
SPTLC1O15269 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SPTLC1O15269 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SPTLC1O15269 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC21.17■□□□□ 0.98
SPTLC1O15269 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SPTLC1O15269 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SPTLC1O15269 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
SPTLC1O15269 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SPTLC1O15269 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SPTLC1O15269 AL691432.2-201ENST00000607222 2038 ntBASIC21.17■□□□□ 0.98
SPTLC1O15269 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
SPTLC1O15269 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SPTLC1O15269 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SPTLC1O15269 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
SPTLC1O15269 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC21.16■□□□□ 0.98
SPTLC1O15269 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SPTLC1O15269 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
SPTLC1O15269 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
SPTLC1O15269 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SPTLC1O15269 MOK-225ENST00000522867 1883 ntTSL 5 BASIC21.16■□□□□ 0.98
SPTLC1O15269 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SPTLC1O15269 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC21.16■□□□□ 0.98
SPTLC1O15269 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SPTLC1O15269 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SPTLC1O15269 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
SPTLC1O15269 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SPTLC1O15269 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC21.16■□□□□ 0.98
SPTLC1O15269 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC21.16■□□□□ 0.98
SPTLC1O15269 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SPTLC1O15269 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SPTLC1O15269 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC21.16■□□□□ 0.98
SPTLC1O15269 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC21.16■□□□□ 0.98
SPTLC1O15269 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
SPTLC1O15269 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SPTLC1O15269 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC21.15■□□□□ 0.98
SPTLC1O15269 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
SPTLC1O15269 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC21.15■□□□□ 0.98
SPTLC1O15269 HTR7P1-201ENST00000538670 1336 ntBASIC21.15■□□□□ 0.98
SPTLC1O15269 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
SPTLC1O15269 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC21.15■□□□□ 0.98
SPTLC1O15269 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC21.15■□□□□ 0.98
SPTLC1O15269 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC21.15■□□□□ 0.98
SPTLC1O15269 AL049637.2-201ENST00000641778 930 ntBASIC21.15■□□□□ 0.98
SPTLC1O15269 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC21.15■□□□□ 0.98
SPTLC1O15269 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
SPTLC1O15269 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SPTLC1O15269 AC099778.1-201ENST00000568593 1911 ntBASIC21.15■□□□□ 0.98
SPTLC1O15269 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
SPTLC1O15269 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
SPTLC1O15269 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
SPTLC1O15269 AP006587.1-201ENST00000534129 1502 ntBASIC21.14■□□□□ 0.98
SPTLC1O15269 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
SPTLC1O15269 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC21.14■□□□□ 0.98
SPTLC1O15269 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC21.14■□□□□ 0.97
SPTLC1O15269 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC21.14■□□□□ 0.97
SPTLC1O15269 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
SPTLC1O15269 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
SPTLC1O15269 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
SPTLC1O15269 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms