Protein–RNA interactions for Protein: A3KN83

SBNO1, Protein strawberry notch homolog 1, humanhuman

Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1A3KN83 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC26.93■■□□□ 1.9
SBNO1A3KN83 GPX4-207ENST00000589115 812 ntTSL 2 BASIC26.93■■□□□ 1.9
SBNO1A3KN83 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC26.93■■□□□ 1.9
SBNO1A3KN83 AC010653.2-201ENST00000623505 997 ntBASIC26.93■■□□□ 1.9
SBNO1A3KN83 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC26.93■■□□□ 1.9
SBNO1A3KN83 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC26.93■■□□□ 1.9
SBNO1A3KN83 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC26.93■■□□□ 1.9
SBNO1A3KN83 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC26.92■■□□□ 1.9
SBNO1A3KN83 STK25-234ENST00000535007 2459 ntTSL 2 BASIC26.92■■□□□ 1.9
SBNO1A3KN83 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
SBNO1A3KN83 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC26.92■■□□□ 1.9
SBNO1A3KN83 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
SBNO1A3KN83 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC26.92■■□□□ 1.9
SBNO1A3KN83 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
SBNO1A3KN83 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC26.92■■□□□ 1.9
SBNO1A3KN83 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC26.92■■□□□ 1.9
SBNO1A3KN83 MFAP1P1-201ENST00000442257 1255 ntBASIC26.92■■□□□ 1.9
SBNO1A3KN83 FAM207BP-201ENST00000447172 505 ntBASIC26.92■■□□□ 1.9
SBNO1A3KN83 AC011298.2-201ENST00000617989 482 ntBASIC26.92■■□□□ 1.9
SBNO1A3KN83 AL121956.5-201ENST00000625261 221 ntBASIC26.92■■□□□ 1.9
SBNO1A3KN83 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC26.92■■□□□ 1.9
SBNO1A3KN83 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
SBNO1A3KN83 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC26.92■■□□□ 1.9
SBNO1A3KN83 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
SBNO1A3KN83 ERF-202ENST00000440177 2032 ntTSL 2 BASIC26.91■■□□□ 1.9
SBNO1A3KN83 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
SBNO1A3KN83 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
SBNO1A3KN83 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
SBNO1A3KN83 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
SBNO1A3KN83 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
SBNO1A3KN83 PTPA-216ENST00000432651 857 ntTSL 2 BASIC26.91■■□□□ 1.9
SBNO1A3KN83 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC26.91■■□□□ 1.9
SBNO1A3KN83 CYGB-204ENST00000589342 815 ntTSL 3 BASIC26.91■■□□□ 1.9
SBNO1A3KN83 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
SBNO1A3KN83 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
SBNO1A3KN83 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
SBNO1A3KN83 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
SBNO1A3KN83 CCR12P-201ENST00000446203 998 ntBASIC26.9■■□□□ 1.9
SBNO1A3KN83 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC26.9■■□□□ 1.9
SBNO1A3KN83 COX11P1-201ENST00000489116 835 ntBASIC26.9■■□□□ 1.9
SBNO1A3KN83 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC26.9■■□□□ 1.9
SBNO1A3KN83 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC26.9■■□□□ 1.9
SBNO1A3KN83 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC26.9■■□□□ 1.9
SBNO1A3KN83 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC26.9■■□□□ 1.9
SBNO1A3KN83 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC26.89■■□□□ 1.9
SBNO1A3KN83 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
SBNO1A3KN83 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
SBNO1A3KN83 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC26.89■■□□□ 1.9
SBNO1A3KN83 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
SBNO1A3KN83 KRT18P48-201ENST00000434763 852 ntBASIC26.89■■□□□ 1.9
SBNO1A3KN83 AC007663.1-201ENST00000438948 1240 ntBASIC26.89■■□□□ 1.9
SBNO1A3KN83 FAM86EP-206ENST00000510506 987 ntBASIC26.89■■□□□ 1.9
SBNO1A3KN83 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC26.89■■□□□ 1.9
SBNO1A3KN83 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC26.89■■□□□ 1.9
SBNO1A3KN83 HLA-A-209ENST00000638375 975 ntBASIC26.89■■□□□ 1.9
SBNO1A3KN83 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC26.89■■□□□ 1.9
SBNO1A3KN83 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC26.89■■□□□ 1.9
SBNO1A3KN83 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
SBNO1A3KN83 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
SBNO1A3KN83 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC26.89■■□□□ 1.89
SBNO1A3KN83 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC26.89■■□□□ 1.89
SBNO1A3KN83 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC26.89■■□□□ 1.89
SBNO1A3KN83 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC26.89■■□□□ 1.89
SBNO1A3KN83 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC26.89■■□□□ 1.89
SBNO1A3KN83 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC26.89■■□□□ 1.89
SBNO1A3KN83 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC26.89■■□□□ 1.89
SBNO1A3KN83 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
SBNO1A3KN83 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
SBNO1A3KN83 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
SBNO1A3KN83 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
SBNO1A3KN83 AC004951.3-201ENST00000418645 1148 ntBASIC26.88■■□□□ 1.89
SBNO1A3KN83 DUSP5P1-201ENST00000441325 1139 ntBASIC26.88■■□□□ 1.89
SBNO1A3KN83 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC26.88■■□□□ 1.89
SBNO1A3KN83 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC26.88■■□□□ 1.89
SBNO1A3KN83 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC26.88■■□□□ 1.89
SBNO1A3KN83 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
SBNO1A3KN83 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC26.88■■□□□ 1.89
SBNO1A3KN83 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC26.88■■□□□ 1.89
SBNO1A3KN83 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC26.88■■□□□ 1.89
SBNO1A3KN83 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
SBNO1A3KN83 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
SBNO1A3KN83 AC092338.2-201ENST00000568827 1415 ntBASIC26.88■■□□□ 1.89
SBNO1A3KN83 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
SBNO1A3KN83 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
SBNO1A3KN83 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
SBNO1A3KN83 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
SBNO1A3KN83 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
SBNO1A3KN83 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC26.88■■□□□ 1.89
SBNO1A3KN83 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC26.88■■□□□ 1.89
SBNO1A3KN83 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC26.88■■□□□ 1.89
SBNO1A3KN83 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC26.87■■□□□ 1.89
SBNO1A3KN83 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC26.87■■□□□ 1.89
SBNO1A3KN83 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC26.87■■□□□ 1.89
SBNO1A3KN83 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
SBNO1A3KN83 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
SBNO1A3KN83 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC26.87■■□□□ 1.89
SBNO1A3KN83 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC26.87■■□□□ 1.89
SBNO1A3KN83 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
SBNO1A3KN83 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC26.87■■□□□ 1.89
SBNO1A3KN83 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC26.87■■□□□ 1.89
Retrieved 100 of 98,524 protein–RNA pairs in 11.4 ms