Protein–RNA interactions for Protein: A0A1B0GTZ2

CCDC196, Putative coiled-coil domain-containing protein 196, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196A0A1B0GTZ2 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC23■■□□□ 1.27
CCDC196A0A1B0GTZ2 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC23■■□□□ 1.27
CCDC196A0A1B0GTZ2 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC23■■□□□ 1.27
CCDC196A0A1B0GTZ2 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC23■■□□□ 1.27
CCDC196A0A1B0GTZ2 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC23■■□□□ 1.27
CCDC196A0A1B0GTZ2 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC23■■□□□ 1.27
CCDC196A0A1B0GTZ2 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC23■■□□□ 1.27
CCDC196A0A1B0GTZ2 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CCDC196A0A1B0GTZ2 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC23■■□□□ 1.27
CCDC196A0A1B0GTZ2 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC22.99■■□□□ 1.27
CCDC196A0A1B0GTZ2 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC22.99■■□□□ 1.27
CCDC196A0A1B0GTZ2 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
CCDC196A0A1B0GTZ2 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CCDC196A0A1B0GTZ2 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CCDC196A0A1B0GTZ2 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CCDC196A0A1B0GTZ2 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC22.99■■□□□ 1.27
CCDC196A0A1B0GTZ2 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
CCDC196A0A1B0GTZ2 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
CCDC196A0A1B0GTZ2 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC22.99■■□□□ 1.27
CCDC196A0A1B0GTZ2 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CCDC196A0A1B0GTZ2 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CCDC196A0A1B0GTZ2 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC22.99■■□□□ 1.27
CCDC196A0A1B0GTZ2 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC22.99■■□□□ 1.27
CCDC196A0A1B0GTZ2 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC22.99■■□□□ 1.27
CCDC196A0A1B0GTZ2 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC22.99■■□□□ 1.27
CCDC196A0A1B0GTZ2 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC22.99■■□□□ 1.27
CCDC196A0A1B0GTZ2 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC22.99■■□□□ 1.27
CCDC196A0A1B0GTZ2 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC22.99■■□□□ 1.27
CCDC196A0A1B0GTZ2 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC22.99■■□□□ 1.27
CCDC196A0A1B0GTZ2 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC22.99■■□□□ 1.27
CCDC196A0A1B0GTZ2 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC22.99■■□□□ 1.27
CCDC196A0A1B0GTZ2 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
CCDC196A0A1B0GTZ2 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CCDC196A0A1B0GTZ2 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC22.99■■□□□ 1.27
CCDC196A0A1B0GTZ2 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC22.99■■□□□ 1.27
CCDC196A0A1B0GTZ2 BID-204ENST00000399767 2129 ntTSL 2 BASIC22.99■■□□□ 1.27
CCDC196A0A1B0GTZ2 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CCDC196A0A1B0GTZ2 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC22.99■■□□□ 1.27
CCDC196A0A1B0GTZ2 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC22.99■■□□□ 1.27
CCDC196A0A1B0GTZ2 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC22.98■■□□□ 1.27
CCDC196A0A1B0GTZ2 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
CCDC196A0A1B0GTZ2 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CCDC196A0A1B0GTZ2 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC22.98■■□□□ 1.27
CCDC196A0A1B0GTZ2 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
CCDC196A0A1B0GTZ2 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC22.98■■□□□ 1.27
CCDC196A0A1B0GTZ2 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC22.98■■□□□ 1.27
CCDC196A0A1B0GTZ2 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC22.98■■□□□ 1.27
CCDC196A0A1B0GTZ2 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CCDC196A0A1B0GTZ2 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC22.98■■□□□ 1.27
CCDC196A0A1B0GTZ2 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC22.98■■□□□ 1.27
CCDC196A0A1B0GTZ2 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC22.98■■□□□ 1.27
CCDC196A0A1B0GTZ2 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC22.98■■□□□ 1.27
CCDC196A0A1B0GTZ2 DENND3-207ENST00000518347 850 ntTSL 2 BASIC22.98■■□□□ 1.27
CCDC196A0A1B0GTZ2 MMAB-206ENST00000540016 945 ntTSL 3 BASIC22.98■■□□□ 1.27
CCDC196A0A1B0GTZ2 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC22.98■■□□□ 1.27
CCDC196A0A1B0GTZ2 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
CCDC196A0A1B0GTZ2 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
CCDC196A0A1B0GTZ2 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CCDC196A0A1B0GTZ2 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CCDC196A0A1B0GTZ2 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
CCDC196A0A1B0GTZ2 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC22.98■■□□□ 1.27
CCDC196A0A1B0GTZ2 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
CCDC196A0A1B0GTZ2 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC22.98■■□□□ 1.27
CCDC196A0A1B0GTZ2 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC22.98■■□□□ 1.27
CCDC196A0A1B0GTZ2 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
CCDC196A0A1B0GTZ2 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
CCDC196A0A1B0GTZ2 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
CCDC196A0A1B0GTZ2 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CCDC196A0A1B0GTZ2 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC22.97■■□□□ 1.27
CCDC196A0A1B0GTZ2 KRT17P3-201ENST00000420566 1262 ntBASIC22.97■■□□□ 1.27
CCDC196A0A1B0GTZ2 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC22.97■■□□□ 1.27
CCDC196A0A1B0GTZ2 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC22.97■■□□□ 1.27
CCDC196A0A1B0GTZ2 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC22.97■■□□□ 1.27
CCDC196A0A1B0GTZ2 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
CCDC196A0A1B0GTZ2 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC22.97■■□□□ 1.27
CCDC196A0A1B0GTZ2 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CCDC196A0A1B0GTZ2 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC22.97■■□□□ 1.27
CCDC196A0A1B0GTZ2 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC22.97■■□□□ 1.27
CCDC196A0A1B0GTZ2 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
CCDC196A0A1B0GTZ2 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC22.96■■□□□ 1.27
CCDC196A0A1B0GTZ2 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
CCDC196A0A1B0GTZ2 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC22.96■■□□□ 1.27
CCDC196A0A1B0GTZ2 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC22.96■■□□□ 1.27
CCDC196A0A1B0GTZ2 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC22.96■■□□□ 1.27
CCDC196A0A1B0GTZ2 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
CCDC196A0A1B0GTZ2 ESRRAP1-201ENST00000400596 1257 ntBASIC22.96■■□□□ 1.27
CCDC196A0A1B0GTZ2 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC22.96■■□□□ 1.27
CCDC196A0A1B0GTZ2 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC22.96■■□□□ 1.27
CCDC196A0A1B0GTZ2 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC22.96■■□□□ 1.27
CCDC196A0A1B0GTZ2 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
CCDC196A0A1B0GTZ2 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
CCDC196A0A1B0GTZ2 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
CCDC196A0A1B0GTZ2 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
CCDC196A0A1B0GTZ2 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
CCDC196A0A1B0GTZ2 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
CCDC196A0A1B0GTZ2 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC22.96■■□□□ 1.27
CCDC196A0A1B0GTZ2 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
CCDC196A0A1B0GTZ2 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC22.95■■□□□ 1.26
CCDC196A0A1B0GTZ2 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
CCDC196A0A1B0GTZ2 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC22.95■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 4047 ms