Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 AC040162.3-201ENST00000572067 3907 ntBASIC2.15□□□□□ -2.06
KRTAP4-4Q9BYR3 AL080251.1-201ENST00000494072 4369 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.06
KRTAP4-4Q9BYR3 TBC1D15-217ENST00000550746 6184 ntTSL 1 (best) BASIC2.15□□□□□ -2.06
KRTAP4-4Q9BYR3 SPRYD3-201ENST00000301463 2932 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
KRTAP4-4Q9BYR3 CCDC60-201ENST00000327554 2450 ntAPPRIS P2 TSL 1 (best) BASIC2.15□□□□□ -2.06
KRTAP4-4Q9BYR3 ACSM2B-201ENST00000329697 2935 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
KRTAP4-4Q9BYR3 AGMO-201ENST00000342526 2475 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
KRTAP4-4Q9BYR3 C8B-201ENST00000371237 2037 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
KRTAP4-4Q9BYR3 KLHL2-202ENST00000421009 2452 ntTSL 5 BASIC2.15□□□□□ -2.06
KRTAP4-4Q9BYR3 MSL3P1-201ENST00000438684 2032 ntTSL 2 BASIC2.15□□□□□ -2.06
KRTAP4-4Q9BYR3 SEC14L1-205ENST00000443798 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC2.15□□□□□ -2.06
KRTAP4-4Q9BYR3 ARMC8-223ENST00000538260 4728 ntTSL 2 BASIC2.15□□□□□ -2.06
KRTAP4-4Q9BYR3 OR4D2-201ENST00000545221 1551 ntAPPRIS P1 BASIC2.15□□□□□ -2.06
KRTAP4-4Q9BYR3 AC096720.2-201ENST00000623308 2458 ntBASIC2.15□□□□□ -2.06
KRTAP4-4Q9BYR3 TPI1P2-202ENST00000635637 2017 ntBASIC2.15□□□□□ -2.06
KRTAP4-4Q9BYR3 KCNA2-215ENST00000640956 1584 ntTSL 5 BASIC2.15□□□□□ -2.06
KRTAP4-4Q9BYR3 EREG-201ENST00000244869 4619 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
KRTAP4-4Q9BYR3 PTCH1-206ENST00000421141 7659 ntTSL 5 BASIC2.15□□□□□ -2.06
KRTAP4-4Q9BYR3 SMCR5-201ENST00000543475 2844 ntBASIC2.15□□□□□ -2.06
KRTAP4-4Q9BYR3 SPTB-208ENST00000556626 10153 ntTSL 1 (best) BASIC2.15□□□□□ -2.06
KRTAP4-4Q9BYR3 LONRF2-202ENST00000409647 2363 ntAPPRIS ALT2 TSL 2 BASIC2.15□□□□□ -2.06
KRTAP4-4Q9BYR3 SHROOM2P1-201ENST00000434773 2384 ntBASIC2.15□□□□□ -2.06
KRTAP4-4Q9BYR3 THAP12P9-201ENST00000503971 2360 ntBASIC2.15□□□□□ -2.06
KRTAP4-4Q9BYR3 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.15□□□□□ -2.06
KRTAP4-4Q9BYR3 CYB5R4-202ENST00000369681 9252 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
KRTAP4-4Q9BYR3 IGF2BP2-AS1-201ENST00000296270 1924 ntTSL 1 (best) BASIC2.15□□□□□ -2.06
KRTAP4-4Q9BYR3 LINC00211-201ENST00000413792 1923 ntTSL 2 BASIC2.15□□□□□ -2.06
KRTAP4-4Q9BYR3 ELP4-218ENST00000639570 5795 ntTSL 5 BASIC2.15□□□□□ -2.06
KRTAP4-4Q9BYR3 TPX2-202ENST00000340513 3605 ntTSL 1 (best) BASIC2.15□□□□□ -2.06
KRTAP4-4Q9BYR3 COPZ1-212ENST00000551779 1462 ntAPPRIS ALT1 TSL 2 BASIC2.15□□□□□ -2.06
KRTAP4-4Q9BYR3 C3orf20-202ENST00000412910 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.06
KRTAP4-4Q9BYR3 MUC4-203ENST00000346145 3982 ntAPPRIS P4 TSL 1 (best) BASIC2.15□□□□□ -2.06
KRTAP4-4Q9BYR3 PCDHGA4-201ENST00000571252 4778 ntAPPRIS P3 TSL 1 (best) BASIC2.15□□□□□ -2.06
KRTAP4-4Q9BYR3 AP000533.2-201ENST00000417863 2260 ntBASIC2.15□□□□□ -2.06
KRTAP4-4Q9BYR3 CD44-209ENST00000433892 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.06
KRTAP4-4Q9BYR3 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
KRTAP4-4Q9BYR3 MELK-206ENST00000536329 2283 ntTSL 1 (best) BASIC2.15□□□□□ -2.06
KRTAP4-4Q9BYR3 SLC5A11-205ENST00000545376 2294 ntTSL 2 BASIC2.15□□□□□ -2.06
KRTAP4-4Q9BYR3 AC091132.4-201ENST00000587960 2262 ntBASIC2.15□□□□□ -2.06
KRTAP4-4Q9BYR3 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC2.15□□□□□ -2.06
KRTAP4-4Q9BYR3 TTLL13P-206ENST00000641754 2256 ntAPPRIS ALT2 BASIC2.15□□□□□ -2.06
KRTAP4-4Q9BYR3 ZIC4-201ENST00000383075 4331 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
KRTAP4-4Q9BYR3 LEPR-204ENST00000371059 3079 ntTSL 1 (best) BASIC2.15□□□□□ -2.06
KRTAP4-4Q9BYR3 TEX10-201ENST00000374902 3074 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
KRTAP4-4Q9BYR3 ILF3-222ENST00000592763 3866 ntTSL 5 BASIC2.15□□□□□ -2.06
KRTAP4-4Q9BYR3 PIK3C2B-204ENST00000424712 7522 ntTSL 1 (best) BASIC2.15□□□□□ -2.06
KRTAP4-4Q9BYR3 DDX27-201ENST00000371764 2643 ntAPPRIS P2 TSL 1 (best) BASIC2.15□□□□□ -2.06
KRTAP4-4Q9BYR3 AC009951.1-201ENST00000623674 2614 ntBASIC2.15□□□□□ -2.06
KRTAP4-4Q9BYR3 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.15□□□□□ -2.06
KRTAP4-4Q9BYR3 ZDHHC22-201ENST00000319374 3408 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
KRTAP4-4Q9BYR3 AC093390.1-201ENST00000426976 3403 ntTSL 1 (best) BASIC2.15□□□□□ -2.06
KRTAP4-4Q9BYR3 BCL2L11-218ENST00000615946 5026 ntTSL 5 BASIC2.15□□□□□ -2.06
KRTAP4-4Q9BYR3 BCL2L11-220ENST00000620862 5044 ntAPPRIS ALT2 TSL 5 BASIC2.15□□□□□ -2.06
KRTAP4-4Q9BYR3 RIMS2-202ENST00000339750 3780 ntTSL 3 BASIC2.15□□□□□ -2.07
KRTAP4-4Q9BYR3 ABCB9-206ENST00000442028 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.07
KRTAP4-4Q9BYR3 FCHO1-218ENST00000596951 2979 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
KRTAP4-4Q9BYR3 ZNF592-203ENST00000560079 8131 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
KRTAP4-4Q9BYR3 POLE3-202ENST00000374171 2191 ntAPPRIS P1 TSL 2 BASIC2.15□□□□□ -2.07
KRTAP4-4Q9BYR3 STX2-203ENST00000392373 2151 ntAPPRIS P4 TSL 5 BASIC2.15□□□□□ -2.07
KRTAP4-4Q9BYR3 CLIP4-203ENST00000401617 2162 ntTSL 5 BASIC2.15□□□□□ -2.07
KRTAP4-4Q9BYR3 JCAD-201ENST00000375377 9265 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
KRTAP4-4Q9BYR3 DMBT1-203ENST00000344338 7656 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.07
KRTAP4-4Q9BYR3 DMBT1-205ENST00000368955 7656 ntAPPRIS ALT2 TSL 5 BASIC2.15□□□□□ -2.07
KRTAP4-4Q9BYR3 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC2.15□□□□□ -2.07
KRTAP4-4Q9BYR3 AGBL4-203ENST00000371838 1353 ntAPPRIS ALT2 TSL 5 BASIC2.15□□□□□ -2.07
KRTAP4-4Q9BYR3 AC092295.2-201ENST00000592087 1392 ntBASIC2.15□□□□□ -2.07
KRTAP4-4Q9BYR3 PLEKHS1-203ENST00000369309 2534 ntTSL 5 BASIC2.15□□□□□ -2.07
KRTAP4-4Q9BYR3 IKZF4-203ENST00000547167 2539 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
KRTAP4-4Q9BYR3 AC008764.9-201ENST00000624284 2505 ntBASIC2.15□□□□□ -2.07
KRTAP4-4Q9BYR3 ARRDC3-AS1-201ENST00000625713 2500 ntTSL 2 BASIC2.15□□□□□ -2.07
KRTAP4-4Q9BYR3 SMPD4-201ENST00000351288 3661 ntTSL 2 BASIC2.15□□□□□ -2.07
KRTAP4-4Q9BYR3 MAP3K7-205ENST00000369332 4830 ntAPPRIS ALT1 TSL 1 (best) BASIC2.15□□□□□ -2.07
KRTAP4-4Q9BYR3 TPT1-214ENST00000616577 4814 ntTSL 3 BASIC2.15□□□□□ -2.07
KRTAP4-4Q9BYR3 QTRT2-201ENST00000281273 4023 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
KRTAP4-4Q9BYR3 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC2.15□□□□□ -2.07
KRTAP4-4Q9BYR3 AC074091.1-201ENST00000505973 1741 ntTSL 2 BASIC2.15□□□□□ -2.07
KRTAP4-4Q9BYR3 MLC1-201ENST00000311597 3933 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
KRTAP4-4Q9BYR3 ARPP21-203ENST00000396482 2416 ntTSL 2 BASIC2.15□□□□□ -2.07
KRTAP4-4Q9BYR3 CHODL-204ENST00000400128 2421 ntTSL 2 BASIC2.15□□□□□ -2.07
KRTAP4-4Q9BYR3 LINC00540-203ENST00000631321 2412 ntTSL 2 BASIC2.15□□□□□ -2.07
KRTAP4-4Q9BYR3 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC2.15□□□□□ -2.07
KRTAP4-4Q9BYR3 FLNB-201ENST00000295956 9463 ntAPPRIS P3 TSL 1 (best) BASIC2.15□□□□□ -2.07
KRTAP4-4Q9BYR3 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
KRTAP4-4Q9BYR3 ACOT9-202ENST00000379295 2768 ntTSL 2 BASIC2.15□□□□□ -2.07
KRTAP4-4Q9BYR3 YTHDF3-201ENST00000517371 3122 ntTSL 3 BASIC2.15□□□□□ -2.07
KRTAP4-4Q9BYR3 MERTK-207ENST00000616902 3104 ntTSL 5 BASIC2.15□□□□□ -2.07
KRTAP4-4Q9BYR3 PTPN2-201ENST00000309660 3467 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
KRTAP4-4Q9BYR3 MRPL19-202ENST00000393909 3479 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
KRTAP4-4Q9BYR3 PMF1-BGLAP-201ENST00000320139 773 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
KRTAP4-4Q9BYR3 HSPE1P11-201ENST00000339579 310 ntBASIC2.15□□□□□ -2.07
KRTAP4-4Q9BYR3 KRTAP13-1-201ENST00000355459 749 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
KRTAP4-4Q9BYR3 ZNF483-202ENST00000355824 1239 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
KRTAP4-4Q9BYR3 GNRHR2-202ENST00000361928 1035 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
KRTAP4-4Q9BYR3 RNA5-8SP7-201ENST00000363443 155 ntBASIC2.15□□□□□ -2.07
KRTAP4-4Q9BYR3 RNU6-288P-201ENST00000363690 104 ntBASIC2.15□□□□□ -2.07
KRTAP4-4Q9BYR3 RNU6-407P-201ENST00000365280 104 ntBASIC2.15□□□□□ -2.07
KRTAP4-4Q9BYR3 MRPL55-212ENST00000366739 641 ntAPPRIS P1 TSL 3 BASIC2.15□□□□□ -2.07
KRTAP4-4Q9BYR3 MRPL55-213ENST00000366740 644 ntAPPRIS P1 TSL 2 BASIC2.15□□□□□ -2.07
KRTAP4-4Q9BYR3 SWT1-201ENST00000367500 3830 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
KRTAP4-4Q9BYR3 MR1-203ENST00000367579 1154 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 140.8 ms