RNA–Protein interactions for RNA: ENST00000383075.7

ZIC4-201, Transcript of Zic family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZIC4, Length 4,331 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4-201ENST00000383075 NISCHQ9Y2I1 1504 aa19.76■□□□□ 0.75
ZIC4-201ENST00000383075 DCAF8L2P0C7V8 631 aa19.01■□□□□ 0.63
ZIC4-201ENST00000383075 SHROOM4Q9ULL8 1493 aa18.11■□□□□ 0.49
ZIC4-201ENST00000383075 SUPT5HO00267 1087 aaKnown RBP18.08■□□□□ 0.48
ZIC4-201ENST00000383075 EHMT2Q96KQ7 1210 aa17.13■□□□□ 0.33
ZIC4-201ENST00000383075 FAM9AQ8IZU1 332 aaPredicted RBP16.94■□□□□ 0.3
ZIC4-201ENST00000383075 ABCC9O60706 1549 aa16.8■□□□□ 0.28
ZIC4-201ENST00000383075 TRIM41Q8WV44 630 aa16.79■□□□□ 0.28
ZIC4-201ENST00000383075 APLP2Q06481 763 aa16.58■□□□□ 0.24
ZIC4-201ENST00000383075 PCGF6Q9BYE7 350 aa16.51■□□□□ 0.23
ZIC4-201ENST00000383075 PELP1Q8IZL8 1130 aaKnown RBP16.5■□□□□ 0.23
ZIC4-201ENST00000383075 TTBK1Q5TCY1 1321 aaPredicted RBP16.49■□□□□ 0.23
ZIC4-201ENST00000383075 CHIC1Q5VXU3 224 aa16.48■□□□□ 0.23
ZIC4-201ENST00000383075 RANGAP1P46060 587 aaPredicted RBP16.46■□□□□ 0.23
ZIC4-201ENST00000383075 PABPN1Q86U42 306 aaKnown RBP eCLIP16.46■□□□□ 0.22
ZIC4-201ENST00000383075 ZCCHC6Q5VYS8 1495 aaKnown RBP16.42■□□□□ 0.22
ZIC4-201ENST00000383075 UBTFP17480 764 aaKnown RBP16.41■□□□□ 0.22
ZIC4-201ENST00000383075 CCDC180Q9P1Z9 1646 aa16.41■□□□□ 0.22
ZIC4-201ENST00000383075 LOC105371045A0A1W2PR82 267 aa16.27■□□□□ 0.2
ZIC4-201ENST00000383075 ATP1B4Q9UN42 357 aaPredicted RBP16.19■□□□□ 0.18
ZIC4-201ENST00000383075 PPARGC1BQ86YN6 1023 aaKnown RBP16.15■□□□□ 0.18
ZIC4-201ENST00000383075 SCRIBQ14160 1630 aa16.14■□□□□ 0.17
ZIC4-201ENST00000383075 CCER1Q8TC90 406 aaPredicted RBP16.05■□□□□ 0.16
ZIC4-201ENST00000383075 TRIM26Q12899 539 aaPredicted RBP15.99■□□□□ 0.15
ZIC4-201ENST00000383075 ZEB1P37275 1124 aaPredicted RBP15.98■□□□□ 0.15
ZIC4-201ENST00000383075 CENPBP07199 599 aaPredicted RBP15.97■□□□□ 0.15
ZIC4-201ENST00000383075 ERICH6Q7L0X2 663 aa15.85■□□□□ 0.13
ZIC4-201ENST00000383075 RB1CC1Q8TDY2 1594 aa15.84■□□□□ 0.13
ZIC4-201ENST00000383075 NACADO15069 1562 aa15.8■□□□□ 0.12
ZIC4-201ENST00000383075 DCAF1Q9Y4B6 1507 aa15.76■□□□□ 0.11
ZIC4-201ENST00000383075 ITGAEP38570 1179 aa15.75■□□□□ 0.11
ZIC4-201ENST00000383075 HRCP23327 699 aa15.72■□□□□ 0.11
ZIC4-201ENST00000383075 HNRNPUL2Q1KMD3 747 aaKnown RBP15.72■□□□□ 0.11
ZIC4-201ENST00000383075 RSF1Q96T23 1441 aaPredicted RBP15.72■□□□□ 0.11
ZIC4-201ENST00000383075 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.71■□□□□ 0.11
ZIC4-201ENST00000383075 CSRNP3Q8WYN3 585 aa15.69■□□□□ 0.1
ZIC4-201ENST00000383075 YTHDC1Q96MU7 727 aaKnown RBP15.62■□□□□ 0.09
ZIC4-201ENST00000383075 MYT1Q01538 1121 aa15.58■□□□□ 0.08
ZIC4-201ENST00000383075 NEFLP07196 543 aa15.57■□□□□ 0.08
ZIC4-201ENST00000383075 CECR2Q9BXF3 1484 aa15.54■□□□□ 0.08
ZIC4-201ENST00000383075 FBLN2P98095 1184 aa15.46■□□□□ 0.07
ZIC4-201ENST00000383075 FAM50AQ14320 339 aaKnown RBP15.45■□□□□ 0.06
ZIC4-201ENST00000383075 P3H3Q8IVL6 736 aa15.44■□□□□ 0.06
ZIC4-201ENST00000383075 BAZ1AQ9NRL2 1556 aaPredicted RBP15.43■□□□□ 0.06
ZIC4-201ENST00000383075 MYT1LQ9UL68 1186 aa15.4■□□□□ 0.06
ZIC4-201ENST00000383075 BAZ1BQ9UIG0 1483 aaKnown RBP15.39■□□□□ 0.05
ZIC4-201ENST00000383075 MYO15BQ96JP2 1530 aa15.37■□□□□ 0.05
ZIC4-201ENST00000383075 MROH2BQ7Z745 1585 aa15.33■□□□□ 0.05
ZIC4-201ENST00000383075 ARID3CA6NKF2 412 aa15.29■□□□□ 0.04
ZIC4-201ENST00000383075 WRNQ14191 1432 aaPredicted RBP eCLIP15.29■□□□□ 0.04
ZIC4-201ENST00000383075 TRIM52Q96A61 297 aa15.23■□□□□ 0.03
ZIC4-201ENST00000383075 POLR3GLQ9BT43 218 aa15.21■□□□□ 0.03
ZIC4-201ENST00000383075 EEA1Q15075 1411 aa15.2■□□□□ 0.02
ZIC4-201ENST00000383075 NEUROD1Q13562 356 aa15.19■□□□□ 0.02
ZIC4-201ENST00000383075 CLIP1P30622 1438 aa15.15■□□□□ 0.02
ZIC4-201ENST00000383075 DIEXFQ68CQ4 756 aaKnown RBP15.15■□□□□ 0.02
ZIC4-201ENST00000383075 CCDC88BA6NC98 1476 aa15.14■□□□□ 0.01
ZIC4-201ENST00000383075 DAXXQ9UER7 740 aaPredicted RBP15.11■□□□□ 0.01
ZIC4-201ENST00000383075 GOLGA3Q08378 1498 aa15.11■□□□□ 0.01
ZIC4-201ENST00000383075 CEP162Q5TB80 1403 aa15.1■□□□□ 0.01
ZIC4-201ENST00000383075 WIZO95785 1651 aa15.1■□□□□ 0.01
ZIC4-201ENST00000383075 CDK11AQ9UQ88 783 aaPredicted RBP15.09■□□□□ 0.01
ZIC4-201ENST00000383075 CNGB1Q14028 1251 aaPredicted RBP15.09■□□□□ 0.01
ZIC4-201ENST00000383075 KIF27Q86VH2 1401 aa15.08■□□□□ 0
ZIC4-201ENST00000383075 SMARCA2P51531 1590 aa15.06■□□□□ 0
ZIC4-201ENST00000383075 ZNF777Q9ULD5 760 aaPredicted RBP15.06■□□□□ 0
ZIC4-201ENST00000383075 SOGA1O94964 1423 aa15.04■□□□□ -0
ZIC4-201ENST00000383075 TNIKQ9UKE5 1360 aa15.04■□□□□ -0
ZIC4-201ENST00000383075 CHMP7Q8WUX9 453 aaPredicted RBP15.03■□□□□ -0
ZIC4-201ENST00000383075 CEP164Q9UPV0 1460 aa15.02□□□□□ -0.01
ZIC4-201ENST00000383075 ABCC8Q09428 1581 aa15.01□□□□□ -0.01
ZIC4-201ENST00000383075 TOP2AP11388 1531 aaKnown RBP15.01□□□□□ -0.01
ZIC4-201ENST00000383075 ZNF326Q5BKZ1 582 aaKnown RBP14.98□□□□□ -0.01
ZIC4-201ENST00000383075 ZNF316A6NFI3 1004 aaPredicted RBP14.97□□□□□ -0.01
ZIC4-201ENST00000383075 ATAD2BQ9ULI0 1458 aa14.97□□□□□ -0.01
ZIC4-201ENST00000383075 SMARCA4P51532 1647 aa14.96□□□□□ -0.01
ZIC4-201ENST00000383075 MTUS2Q5JR59 1369 aa14.96□□□□□ -0.01
ZIC4-201ENST00000383075 CUX2O14529 1486 aa14.92□□□□□ -0.02
ZIC4-201ENST00000383075 CHIC2Q9UKJ5 165 aa14.9□□□□□ -0.02
ZIC4-201ENST00000383075 CARMIL1Q5VZK9 1371 aa14.87□□□□□ -0.03
ZIC4-201ENST00000383075 RTL5Q5HYW3 569 aaPredicted RBP14.87□□□□□ -0.03
ZIC4-201ENST00000383075 ERCC6Q03468 1493 aa14.87□□□□□ -0.03
ZIC4-201ENST00000383075 SLC4A1APQ9BWU0 796 aaKnown RBP14.84□□□□□ -0.03
ZIC4-201ENST00000383075 CADPSQ9ULU8 1353 aa14.84□□□□□ -0.03
ZIC4-201ENST00000383075 NPM1P06748 294 aaKnown RBP eCLIP14.81□□□□□ -0.04
ZIC4-201ENST00000383075 TONSLQ96HA7 1378 aa14.8□□□□□ -0.04
ZIC4-201ENST00000383075 ANP32CO43423 234 aa14.8□□□□□ -0.04
ZIC4-201ENST00000383075 PDS5BQ9NTI5 1447 aa14.8□□□□□ -0.04
ZIC4-201ENST00000383075 GTF3C3Q9Y5Q9 886 aa14.78□□□□□ -0.04
ZIC4-201ENST00000383075 CLSPNQ9HAW4 1339 aa14.78□□□□□ -0.04
ZIC4-201ENST00000383075 TSPY4P0CV99 314 aa14.77□□□□□ -0.05
ZIC4-201ENST00000383075 TSPY10P0CW01 314 aa14.77□□□□□ -0.05
ZIC4-201ENST00000383075 TDRD9Q8NDG6 1382 aaKnown RBP14.76□□□□□ -0.05
ZIC4-201ENST00000383075 PLEKHD1A6NEE1 506 aa14.74□□□□□ -0.05
ZIC4-201ENST00000383075 RRP7BPQ9NSQ0 103 aa14.74□□□□□ -0.05
ZIC4-201ENST00000383075 BCANQ96GW7 911 aa14.74□□□□□ -0.05
ZIC4-201ENST00000383075 VPS8Q8N3P4 1428 aa14.71□□□□□ -0.05
ZIC4-201ENST00000383075 KCNH8Q96L42 1107 aa14.7□□□□□ -0.06
ZIC4-201ENST00000383075 FHAD1B1AJZ9 1412 aa14.7□□□□□ -0.06
ZIC4-201ENST00000383075 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms