RNA–Protein interactions for RNA: ENST00000363690.1

RNU6-288P-201, Transcript of RNA, U6 small nuclear 288, pseudogene, humanhuman

BASIC

Gene RNU6-288P, Length 104 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-288P-201ENST00000363690 CHIC1Q5VXU3 224 aa14.18□□□□□ -0.14
RNU6-288P-201ENST00000363690 AEBP2Q6ZN18 517 aaPredicted RBP14.15□□□□□ -0.14
RNU6-288P-201ENST00000363690 PHF23Q9BUL5 403 aaPredicted RBP12.4□□□□□ -0.42
RNU6-288P-201ENST00000363690 SENP3Q9H4L4 574 aaPredicted RBP12.14□□□□□ -0.47
RNU6-288P-201ENST00000363690 PLPPR3Q6T4P5 718 aa11.67□□□□□ -0.54
RNU6-288P-201ENST00000363690 FOXD1Q16676 465 aa11.12□□□□□ -0.63
RNU6-288P-201ENST00000363690 ADRA2BP18089 450 aa10.85□□□□□ -0.67
RNU6-288P-201ENST00000363690 PPP6R1Q9UPN7 881 aa10.83□□□□□ -0.68
RNU6-288P-201ENST00000363690 POTEDQ86YR6 584 aa10.71□□□□□ -0.69
RNU6-288P-201ENST00000363690 PIAS4Q8N2W9 510 aaPredicted RBP10.57□□□□□ -0.72
RNU6-288P-201ENST00000363690 MSH5O43196 834 aa10.43□□□□□ -0.74
RNU6-288P-201ENST00000363690 PPP4R3CPQ6ZMV5 832 aa10.25□□□□□ -0.77
RNU6-288P-201ENST00000363690 KCNA4P22459 653 aa10.22□□□□□ -0.77
RNU6-288P-201ENST00000363690 NCBP3Q53F19 620 aaKnown RBP10.17□□□□□ -0.78
RNU6-288P-201ENST00000363690 SCAF1Q9H7N4 1312 aaKnown RBP10.14□□□□□ -0.79
RNU6-288P-201ENST00000363690 CNKSR2Q8WXI2 1034 aa9.98□□□□□ -0.81
RNU6-288P-201ENST00000363690 NPM3O75607 178 aaKnown RBP9.88□□□□□ -0.83
RNU6-288P-201ENST00000363690 SLC4A1APQ9BWU0 796 aaKnown RBP9.84□□□□□ -0.83
RNU6-288P-201ENST00000363690 MAPK8IP2Q13387 824 aaPredicted RBP9.74□□□□□ -0.85
RNU6-288P-201ENST00000363690 DNAJC5BQ9UF47 199 aa9.74□□□□□ -0.85
RNU6-288P-201ENST00000363690 EHMT2Q96KQ7 1210 aa9.73□□□□□ -0.85
RNU6-288P-201ENST00000363690 RNF216Q9NWF9 866 aaPredicted RBP9.73□□□□□ -0.85
RNU6-288P-201ENST00000363690 DMRT2Q9Y5R5 561 aa9.7□□□□□ -0.86
RNU6-288P-201ENST00000363690 HOXD11P31277 338 aaPredicted RBP9.61□□□□□ -0.87
RNU6-288P-201ENST00000363690 CSRNP3Q8WYN3 585 aa9.57□□□□□ -0.88
RNU6-288P-201ENST00000363690 FOXD4L1Q9NU39 408 aa9.44□□□□□ -0.9
RNU6-288P-201ENST00000363690 ZBTB22O15209 634 aa9.35□□□□□ -0.91
RNU6-288P-201ENST00000363690 SLC4A2P04920 1241 aa9.25□□□□□ -0.93
RNU6-288P-201ENST00000363690 MYCNP04198 464 aaPredicted RBP9.2□□□□□ -0.94
RNU6-288P-201ENST00000363690 DCAF8L1A6NGE4 600 aa9.18□□□□□ -0.94
RNU6-288P-201ENST00000363690 ATXN8OSP0DMR3 200 aa9.17□□□□□ -0.94
RNU6-288P-201ENST00000363690 CACNB1Q02641 598 aaPredicted RBP9.16□□□□□ -0.94
RNU6-288P-201ENST00000363690 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.13□□□□□ -0.95
RNU6-288P-201ENST00000363690 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.12□□□□□ -0.95
RNU6-288P-201ENST00000363690 HNRNPUL2Q1KMD3 747 aaKnown RBP9.12□□□□□ -0.95
RNU6-288P-201ENST00000363690 SAMD1Q6SPF0 538 aaPredicted RBP9.05□□□□□ -0.96
RNU6-288P-201ENST00000363690 APLP2Q06481 763 aa9□□□□□ -0.97
RNU6-288P-201ENST00000363690 U3KPZ7 1027 aaPredicted RBP8.97□□□□□ -0.97
RNU6-288P-201ENST00000363690 RNF39Q9H2S5 420 aa8.84□□□□□ -0.99
RNU6-288P-201ENST00000363690 C1QBPQ07021 282 aaKnown RBP8.77□□□□□ -1.01
RNU6-288P-201ENST00000363690 ATF5Q9Y2D1 282 aaPredicted RBP8.77□□□□□ -1.01
RNU6-288P-201ENST00000363690 ZNF219Q9P2Y4 722 aaPredicted RBP8.74□□□□□ -1.01
RNU6-288P-201ENST00000363690 FKBP8Q14318 412 aa8.64□□□□□ -1.03
RNU6-288P-201ENST00000363690 CAPN15O75808 1086 aa8.62□□□□□ -1.03
RNU6-288P-201ENST00000363690 TRHP20396 242 aaPredicted RBP8.61□□□□□ -1.03
RNU6-288P-201ENST00000363690 SPINK5Q9NQ38 1064 aaPredicted RBP8.59□□□□□ -1.03
RNU6-288P-201ENST00000363690 FBLN2P98095 1184 aa8.58□□□□□ -1.04
RNU6-288P-201ENST00000363690 ZBTB12Q9Y330 459 aaPredicted RBP8.57□□□□□ -1.04
RNU6-288P-201ENST00000363690 POLA2Q14181 598 aa8.54□□□□□ -1.04
RNU6-288P-201ENST00000363690 SPDYE4A6NLX3 237 aa8.45□□□□□ -1.06
RNU6-288P-201ENST00000363690 MKRN4PQ13434 485 aaPredicted RBP8.45□□□□□ -1.06
RNU6-288P-201ENST00000363690 DSG3P32926 999 aa8.42□□□□□ -1.06
RNU6-288P-201ENST00000363690 FBXO3Q9UK99 471 aa8.42□□□□□ -1.06
RNU6-288P-201ENST00000363690 AMER1Q5JTC6 1135 aaPredicted RBP8.4□□□□□ -1.06
RNU6-288P-201ENST00000363690 ABCB7O75027 752 aa8.39□□□□□ -1.07
RNU6-288P-201ENST00000363690 PROM2Q8N271 834 aa8.37□□□□□ -1.07
RNU6-288P-201ENST00000363690 POTEHQ6S545 545 aa8.35□□□□□ -1.07
RNU6-288P-201ENST00000363690 SPDYE2BA6NHP3 402 aa8.3□□□□□ -1.08
RNU6-288P-201ENST00000363690 SPDYE6P0CI01 402 aa8.3□□□□□ -1.08
RNU6-288P-201ENST00000363690 SPDYE2Q495Y8 402 aa8.3□□□□□ -1.08
RNU6-288P-201ENST00000363690 ZNF692Q9BU19 519 aaPredicted RBP8.26□□□□□ -1.09
RNU6-288P-201ENST00000363690 RTN4Q9NQC3 1192 aaKnown RBP8.23□□□□□ -1.09
RNU6-288P-201ENST00000363690 SSUH2Q9Y2M2 353 aa8.22□□□□□ -1.09
RNU6-288P-201ENST00000363690 OSCARQ8IYS5 282 aa8.2□□□□□ -1.1
RNU6-288P-201ENST00000363690 STAG3Q9UJ98 1225 aa8.2□□□□□ -1.1
RNU6-288P-201ENST00000363690 VASPP50552 380 aaPredicted RBP8.18□□□□□ -1.1
RNU6-288P-201ENST00000363690 RBM42Q9BTD8 480 aaKnown RBP8.14□□□□□ -1.11
RNU6-288P-201ENST00000363690 PABPN1Q86U42 306 aaKnown RBP eCLIP8.12□□□□□ -1.11
RNU6-288P-201ENST00000363690 PLEKHG5O94827 1062 aa8.06□□□□□ -1.12
RNU6-288P-201ENST00000363690 IFNLR1Q8IU57 520 aaPredicted RBP8.05□□□□□ -1.12
RNU6-288P-201ENST00000363690 AKT1S1Q96B36 256 aa8.05□□□□□ -1.12
RNU6-288P-201ENST00000363690 ZBTB47Q9UFB7 747 aaPredicted RBP8.04□□□□□ -1.12
RNU6-288P-201ENST00000363690 PLCD3Q8N3E9 789 aa8.01□□□□□ -1.13
RNU6-288P-201ENST00000363690 KLHL34Q8N239 644 aa8□□□□□ -1.13
RNU6-288P-201ENST00000363690 SPOCK2Q92563 424 aa8□□□□□ -1.13
RNU6-288P-201ENST00000363690 MIER1Q8N108 512 aa7.99□□□□□ -1.13
RNU6-288P-201ENST00000363690 SPDYE1Q8NFV5 336 aaPredicted RBP7.99□□□□□ -1.13
RNU6-288P-201ENST00000363690 SLC24A1O60721 1099 aa7.9□□□□□ -1.14
RNU6-288P-201ENST00000363690 REM2Q8IYK8 340 aaPredicted RBP7.9□□□□□ -1.14
RNU6-288P-201ENST00000363690 PRR29P0C7W0 189 aa7.88□□□□□ -1.15
RNU6-288P-201ENST00000363690 PKD2Q13563 968 aa7.87□□□□□ -1.15
RNU6-288P-201ENST00000363690 TRIM41Q8WV44 630 aa7.87□□□□□ -1.15
RNU6-288P-201ENST00000363690 CLEC11AQ9Y240 323 aa7.85□□□□□ -1.15
RNU6-288P-201ENST00000363690 ECM2O94769 699 aaPredicted RBP7.82□□□□□ -1.16
RNU6-288P-201ENST00000363690 GSE1Q14687 1217 aa7.82□□□□□ -1.16
RNU6-288P-201ENST00000363690 CHRDL2Q6WN34 429 aa7.78□□□□□ -1.16
RNU6-288P-201ENST00000363690 CREBZFQ9NS37 354 aa7.78□□□□□ -1.16
RNU6-288P-201ENST00000363690 PITPNM1O00562 1244 aa7.77□□□□□ -1.17
RNU6-288P-201ENST00000363690 NPM1P06748 294 aaKnown RBP eCLIP7.77□□□□□ -1.17
RNU6-288P-201ENST00000363690 DCAF8L2P0C7V8 631 aa7.77□□□□□ -1.17
RNU6-288P-201ENST00000363690 CIZ1Q9ULV3 898 aaPredicted RBP7.77□□□□□ -1.17
RNU6-288P-201ENST00000363690 TAOK2Q9UL54 1235 aa7.75□□□□□ -1.17
RNU6-288P-201ENST00000363690 NUBP1P53384 320 aa7.74□□□□□ -1.17
RNU6-288P-201ENST00000363690 FAM212AQ96EL1 285 aa7.74□□□□□ -1.17
RNU6-288P-201ENST00000363690 MNX1P50219 401 aaPredicted RBP7.72□□□□□ -1.17
RNU6-288P-201ENST00000363690 PLCB2Q00722 1185 aa7.71□□□□□ -1.18
RNU6-288P-201ENST00000363690 DCAF8Q5TAQ9 597 aa7.71□□□□□ -1.18
RNU6-288P-201ENST00000363690 BBXQ8WY36 941 aaPredicted RBP7.71□□□□□ -1.18
RNU6-288P-201ENST00000363690 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.7□□□□□ -1.18
RNU6-288P-201ENST00000363690 CHRM1P11229 460 aaPredicted RBP7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms