RNA–Protein interactions for RNA: ENST00000311597.9

MLC1-201, Transcript of megalencephalic leukoencephalopathy with subcortical cysts 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MLC1, Length 3,933 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MLC1-201ENST00000311597 NISCHQ9Y2I1 1504 aa21.27■■□□□ 1
MLC1-201ENST00000311597 SHROOM4Q9ULL8 1493 aa19.26■□□□□ 0.67
MLC1-201ENST00000311597 DCAF8L2P0C7V8 631 aa19.23■□□□□ 0.67
MLC1-201ENST00000311597 SUPT5HO00267 1087 aaKnown RBP19.11■□□□□ 0.65
MLC1-201ENST00000311597 PCGF6Q9BYE7 350 aa18.03■□□□□ 0.48
MLC1-201ENST00000311597 CHIC1Q5VXU3 224 aa18.01■□□□□ 0.47
MLC1-201ENST00000311597 EHMT2Q96KQ7 1210 aa17.99■□□□□ 0.47
MLC1-201ENST00000311597 CCDC180Q9P1Z9 1646 aa17.87■□□□□ 0.45
MLC1-201ENST00000311597 ZCCHC6Q5VYS8 1495 aaKnown RBP17.86■□□□□ 0.45
MLC1-201ENST00000311597 FAM9AQ8IZU1 332 aaPredicted RBP17.83■□□□□ 0.44
MLC1-201ENST00000311597 LOC105371045A0A1W2PR82 267 aa17.78■□□□□ 0.44
MLC1-201ENST00000311597 HRCP23327 699 aa17.65■□□□□ 0.42
MLC1-201ENST00000311597 TRIM41Q8WV44 630 aa17.62■□□□□ 0.41
MLC1-201ENST00000311597 MYO15BQ96JP2 1530 aa17.56■□□□□ 0.4
MLC1-201ENST00000311597 PPARGC1BQ86YN6 1023 aaKnown RBP17.53■□□□□ 0.4
MLC1-201ENST00000311597 TTBK1Q5TCY1 1321 aaPredicted RBP17.38■□□□□ 0.37
MLC1-201ENST00000311597 TRIM26Q12899 539 aaPredicted RBP17.36■□□□□ 0.37
MLC1-201ENST00000311597 ABCC9O60706 1549 aa17.29■□□□□ 0.36
MLC1-201ENST00000311597 SCRIBQ14160 1630 aa17.21■□□□□ 0.35
MLC1-201ENST00000311597 ZEB1P37275 1124 aaPredicted RBP17.1■□□□□ 0.33
MLC1-201ENST00000311597 CCER1Q8TC90 406 aaPredicted RBP17.05■□□□□ 0.32
MLC1-201ENST00000311597 DCAF1Q9Y4B6 1507 aa17.05■□□□□ 0.32
MLC1-201ENST00000311597 RSF1Q96T23 1441 aaPredicted RBP17.03■□□□□ 0.32
MLC1-201ENST00000311597 RANGAP1P46060 587 aaPredicted RBP17.01■□□□□ 0.31
MLC1-201ENST00000311597 UBTFP17480 764 aaKnown RBP17■□□□□ 0.31
MLC1-201ENST00000311597 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.91■□□□□ 0.3
MLC1-201ENST00000311597 PABPN1Q86U42 306 aaKnown RBP eCLIP16.88■□□□□ 0.29
MLC1-201ENST00000311597 APLP2Q06481 763 aa16.82■□□□□ 0.28
MLC1-201ENST00000311597 CECR2Q9BXF3 1484 aa16.8■□□□□ 0.28
MLC1-201ENST00000311597 RB1CC1Q8TDY2 1594 aa16.77■□□□□ 0.28
MLC1-201ENST00000311597 HNRNPUL2Q1KMD3 747 aaKnown RBP16.66■□□□□ 0.26
MLC1-201ENST00000311597 MROH2BQ7Z745 1585 aa16.63■□□□□ 0.25
MLC1-201ENST00000311597 NACADO15069 1562 aa16.6■□□□□ 0.25
MLC1-201ENST00000311597 YTHDC1Q96MU7 727 aaKnown RBP16.6■□□□□ 0.25
MLC1-201ENST00000311597 UNC13AQ9UPW8 1703 aa16.59■□□□□ 0.25
MLC1-201ENST00000311597 CSRNP3Q8WYN3 585 aa16.56■□□□□ 0.24
MLC1-201ENST00000311597 CENPBP07199 599 aaPredicted RBP16.55■□□□□ 0.24
MLC1-201ENST00000311597 DIEXFQ68CQ4 756 aaKnown RBP16.52■□□□□ 0.24
MLC1-201ENST00000311597 WIZO95785 1651 aa16.49■□□□□ 0.23
MLC1-201ENST00000311597 ATP1B4Q9UN42 357 aaPredicted RBP16.41■□□□□ 0.22
MLC1-201ENST00000311597 ITGAEP38570 1179 aa16.41■□□□□ 0.22
MLC1-201ENST00000311597 BAZ1AQ9NRL2 1556 aaPredicted RBP16.39■□□□□ 0.21
MLC1-201ENST00000311597 ABCC8Q09428 1581 aa16.38■□□□□ 0.21
MLC1-201ENST00000311597 CEP162Q5TB80 1403 aa16.36■□□□□ 0.21
MLC1-201ENST00000311597 SOGA1O94964 1423 aa16.36■□□□□ 0.21
MLC1-201ENST00000311597 CCDC88BA6NC98 1476 aa16.34■□□□□ 0.21
MLC1-201ENST00000311597 SCAF1Q9H7N4 1312 aaKnown RBP16.33■□□□□ 0.2
MLC1-201ENST00000311597 GTF3C3Q9Y5Q9 886 aa16.28■□□□□ 0.2
MLC1-201ENST00000311597 PELP1Q8IZL8 1130 aaKnown RBP16.27■□□□□ 0.19
MLC1-201ENST00000311597 ZNF316A6NFI3 1004 aaPredicted RBP16.26■□□□□ 0.19
MLC1-201ENST00000311597 ACIN1Q9UKV3 1341 aaKnown RBP16.26■□□□□ 0.19
MLC1-201ENST00000311597 NEUROD1Q13562 356 aa16.24■□□□□ 0.19
MLC1-201ENST00000311597 WRNQ14191 1432 aaPredicted RBP eCLIP16.22■□□□□ 0.19
MLC1-201ENST00000311597 TNIKQ9UKE5 1360 aa16.22■□□□□ 0.19
MLC1-201ENST00000311597 BICRAQ9NZM4 1560 aa16.17■□□□□ 0.18
MLC1-201ENST00000311597 RUSC2Q8N2Y8 1516 aa16.17■□□□□ 0.18
MLC1-201ENST00000311597 CLIP1P30622 1438 aa16.17■□□□□ 0.18
MLC1-201ENST00000311597 GOLGA3Q08378 1498 aa16.17■□□□□ 0.18
MLC1-201ENST00000311597 TOP2AP11388 1531 aaKnown RBP16.16■□□□□ 0.18
MLC1-201ENST00000311597 EEA1Q15075 1411 aa16.14■□□□□ 0.17
MLC1-201ENST00000311597 SMARCA4P51532 1647 aa16.11■□□□□ 0.17
MLC1-201ENST00000311597 BAZ1BQ9UIG0 1483 aaKnown RBP16.07■□□□□ 0.16
MLC1-201ENST00000311597 P3H3Q8IVL6 736 aa16.06■□□□□ 0.16
MLC1-201ENST00000311597 FAM50AQ14320 339 aaKnown RBP16.05■□□□□ 0.16
MLC1-201ENST00000311597 SMARCA2P51531 1590 aa16.04■□□□□ 0.16
MLC1-201ENST00000311597 MIER1Q8N108 512 aa16.04■□□□□ 0.16
MLC1-201ENST00000311597 CEP164Q9UPV0 1460 aa16.03■□□□□ 0.16
MLC1-201ENST00000311597 RAPGEF2Q9Y4G8 1499 aa15.89■□□□□ 0.13
MLC1-201ENST00000311597 VPS8Q8N3P4 1428 aa15.89■□□□□ 0.13
MLC1-201ENST00000311597 ATAD2BQ9ULI0 1458 aa15.87■□□□□ 0.13
MLC1-201ENST00000311597 KANK4Q5T7N3 995 aaPredicted RBP15.87■□□□□ 0.13
MLC1-201ENST00000311597 EIF4G1Q04637 1599 aaKnown RBP15.84■□□□□ 0.13
MLC1-201ENST00000311597 KIF27Q86VH2 1401 aa15.79■□□□□ 0.12
MLC1-201ENST00000311597 BCANQ96GW7 911 aa15.77■□□□□ 0.11
MLC1-201ENST00000311597 SYNJ1O43426 1573 aa15.76■□□□□ 0.11
MLC1-201ENST00000311597 ARID3CA6NKF2 412 aa15.75■□□□□ 0.11
MLC1-201ENST00000311597 NEFLP07196 543 aa15.75■□□□□ 0.11
MLC1-201ENST00000311597 HIRIP3Q9BW71 556 aaPredicted RBP15.74■□□□□ 0.11
MLC1-201ENST00000311597 DDX10Q13206 875 aaKnown RBP15.72■□□□□ 0.11
MLC1-201ENST00000311597 CNGB1Q14028 1251 aaPredicted RBP15.7■□□□□ 0.1
MLC1-201ENST00000311597 PEG3Q9GZU2 1588 aa15.69■□□□□ 0.1
MLC1-201ENST00000311597 CUX2O14529 1486 aa15.67■□□□□ 0.1
MLC1-201ENST00000311597 TRIM52Q96A61 297 aa15.67■□□□□ 0.1
MLC1-201ENST00000311597 CCNB3Q8WWL7 1395 aa15.66■□□□□ 0.1
MLC1-201ENST00000311597 SIN3AQ96ST3 1273 aa15.66■□□□□ 0.1
MLC1-201ENST00000311597 KIF21BO75037 1637 aa15.62■□□□□ 0.09
MLC1-201ENST00000311597 POLR3GLQ9BT43 218 aa15.62■□□□□ 0.09
MLC1-201ENST00000311597 CARMIL1Q5VZK9 1371 aa15.61■□□□□ 0.09
MLC1-201ENST00000311597 ANP32CO43423 234 aa15.6■□□□□ 0.09
MLC1-201ENST00000311597 DHX57Q6P158 1386 aaKnown RBP15.59■□□□□ 0.09
MLC1-201ENST00000311597 CHIC2Q9UKJ5 165 aa15.58■□□□□ 0.08
MLC1-201ENST00000311597 CLSPNQ9HAW4 1339 aa15.58■□□□□ 0.08
MLC1-201ENST00000311597 TONSLQ96HA7 1378 aa15.54■□□□□ 0.08
MLC1-201ENST00000311597 MTUS2Q5JR59 1369 aa15.53■□□□□ 0.08
MLC1-201ENST00000311597 RAB3GAP2Q9H2M9 1393 aa15.53■□□□□ 0.08
MLC1-201ENST00000311597 FKBP8Q14318 412 aa15.52■□□□□ 0.07
MLC1-201ENST00000311597 ARAP1Q96P48 1450 aa15.52■□□□□ 0.07
MLC1-201ENST00000311597 RRP7BPQ9NSQ0 103 aa15.49■□□□□ 0.07
MLC1-201ENST00000311597 MYT1Q01538 1121 aa15.48■□□□□ 0.07
MLC1-201ENST00000311597 KCNH8Q96L42 1107 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms