Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC16.17■□□□□ 0.18
RCL1Q9Y2P8 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RCL1Q9Y2P8 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RCL1Q9Y2P8 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
RCL1Q9Y2P8 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RCL1Q9Y2P8 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
RCL1Q9Y2P8 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RCL1Q9Y2P8 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC16.16■□□□□ 0.18
RCL1Q9Y2P8 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC16.16■□□□□ 0.18
RCL1Q9Y2P8 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC16.16■□□□□ 0.18
RCL1Q9Y2P8 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RCL1Q9Y2P8 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
RCL1Q9Y2P8 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RCL1Q9Y2P8 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
RCL1Q9Y2P8 GOLGA2P11-201ENST00000562660 1621 ntBASIC16.16■□□□□ 0.18
RCL1Q9Y2P8 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
RCL1Q9Y2P8 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
RCL1Q9Y2P8 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RCL1Q9Y2P8 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
RCL1Q9Y2P8 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RCL1Q9Y2P8 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC16.16■□□□□ 0.18
RCL1Q9Y2P8 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC16.16■□□□□ 0.18
RCL1Q9Y2P8 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC16.16■□□□□ 0.18
RCL1Q9Y2P8 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC16.16■□□□□ 0.18
RCL1Q9Y2P8 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC16.16■□□□□ 0.18
RCL1Q9Y2P8 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
RCL1Q9Y2P8 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
RCL1Q9Y2P8 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RCL1Q9Y2P8 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RCL1Q9Y2P8 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RCL1Q9Y2P8 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RCL1Q9Y2P8 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
RCL1Q9Y2P8 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
RCL1Q9Y2P8 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RCL1Q9Y2P8 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RCL1Q9Y2P8 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC16.15■□□□□ 0.18
RCL1Q9Y2P8 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
RCL1Q9Y2P8 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RCL1Q9Y2P8 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RCL1Q9Y2P8 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC16.15■□□□□ 0.18
RCL1Q9Y2P8 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RCL1Q9Y2P8 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RCL1Q9Y2P8 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
RCL1Q9Y2P8 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RCL1Q9Y2P8 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC16.15■□□□□ 0.18
RCL1Q9Y2P8 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
RCL1Q9Y2P8 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC16.15■□□□□ 0.18
RCL1Q9Y2P8 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
RCL1Q9Y2P8 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC16.15■□□□□ 0.18
RCL1Q9Y2P8 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC16.15■□□□□ 0.18
RCL1Q9Y2P8 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
RCL1Q9Y2P8 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC16.15■□□□□ 0.18
RCL1Q9Y2P8 AC120498.10-201ENST00000621827 505 ntBASIC16.15■□□□□ 0.18
RCL1Q9Y2P8 MPST-208ENST00000628507 698 ntTSL 5 BASIC16.15■□□□□ 0.18
RCL1Q9Y2P8 CPT2-209ENST00000636935 803 ntTSL 5 BASIC16.15■□□□□ 0.18
RCL1Q9Y2P8 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RCL1Q9Y2P8 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
RCL1Q9Y2P8 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC16.15■□□□□ 0.18
RCL1Q9Y2P8 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RCL1Q9Y2P8 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RCL1Q9Y2P8 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
RCL1Q9Y2P8 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
RCL1Q9Y2P8 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RCL1Q9Y2P8 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RCL1Q9Y2P8 AC009237.14-201ENST00000609975 1594 ntBASIC16.14■□□□□ 0.17
RCL1Q9Y2P8 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RCL1Q9Y2P8 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RCL1Q9Y2P8 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC16.14■□□□□ 0.17
RCL1Q9Y2P8 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC16.14■□□□□ 0.17
RCL1Q9Y2P8 GRAMD4P2-201ENST00000423297 1097 ntBASIC16.14■□□□□ 0.17
RCL1Q9Y2P8 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RCL1Q9Y2P8 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC16.14■□□□□ 0.17
RCL1Q9Y2P8 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
RCL1Q9Y2P8 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
RCL1Q9Y2P8 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
RCL1Q9Y2P8 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC16.14■□□□□ 0.17
RCL1Q9Y2P8 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RCL1Q9Y2P8 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
RCL1Q9Y2P8 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RCL1Q9Y2P8 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC16.13■□□□□ 0.17
RCL1Q9Y2P8 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RCL1Q9Y2P8 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RCL1Q9Y2P8 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RCL1Q9Y2P8 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC16.13■□□□□ 0.17
RCL1Q9Y2P8 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
RCL1Q9Y2P8 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
RCL1Q9Y2P8 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RCL1Q9Y2P8 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RCL1Q9Y2P8 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
RCL1Q9Y2P8 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RCL1Q9Y2P8 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC16.13■□□□□ 0.17
RCL1Q9Y2P8 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC16.13■□□□□ 0.17
RCL1Q9Y2P8 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RCL1Q9Y2P8 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RCL1Q9Y2P8 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RCL1Q9Y2P8 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC16.13■□□□□ 0.17
RCL1Q9Y2P8 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC16.13■□□□□ 0.17
RCL1Q9Y2P8 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
RCL1Q9Y2P8 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC16.13■□□□□ 0.17
RCL1Q9Y2P8 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms